FFCP PHASE1:Hg19::chr19:7660534..7660552,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57662 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29307 | |||
|TSSclassifier=weak | |||
|UniProt=Q9P1Y5 | |||
|association_with_transcript=-235bp_to_ENST00000160298,ENST00000446248,NM_001080429,NM_020902,uc002mgu.3,uc002mgv.3_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_CAMSAP3_5end | |||
|id=chr19:7660534..7660552,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.25e-08;10!UBERON:0006601;2.41e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.73e-45!94;UBERON:0001016!1.73e-45!94;UBERON:0005743!7.37e-41!86;UBERON:0001017!5.99e-38!82;UBERON:0000955!3.29e-37!69;UBERON:0006238!3.29e-37!69;UBERON:0001049!7.44e-35!57;UBERON:0005068!7.44e-35!57;UBERON:0006241!7.44e-35!57;UBERON:0007135!7.44e-35!57;UBERON:0002346!1.03e-33!90;UBERON:0003075!6.89e-33!86;UBERON:0007284!6.89e-33!86;UBERON:0002020!1.53e-32!34;UBERON:0003528!1.53e-32!34;UBERON:0001893!1.92e-32!34;UBERON:0001869!1.94e-32!32;UBERON:0002616!2.09e-31!59;UBERON:0003056!5.01e-31!61;UBERON:0003080!5.76e-31!42;UBERON:0002791!5.89e-31!33;UBERON:0002780!1.13e-29!41;UBERON:0001890!1.13e-29!41;UBERON:0006240!1.13e-29!41;UBERON:0000924!1.17e-26!173;UBERON:0006601!1.17e-26!173;UBERON:0004121!1.07e-25!169;UBERON:0000956!1.54e-25!25;UBERON:0000203!1.54e-25!25;UBERON:0000033!2.63e-25!123;UBERON:0002619!1.03e-24!22;UBERON:0007023!2.69e-24!115;UBERON:0000153!2.33e-23!129;UBERON:0007811!2.33e-23!129;UBERON:0001950!9.96e-22!20;UBERON:0000475!7.12e-10!365;UBERON:0002021!1.32e-09!5;UBERON:0002308!1.99e-08!9;UBERON:0000125!1.99e-08!9;UBERON:0001871!5.42e-08!7;UBERON:0000922!7.34e-08!612;UBERON:0000013!8.74e-08!5;UBERON:0002410!8.74e-08!5;UBERON:0000200!9.07e-08!6;UBERON:0000062!1.89e-07!511;UBERON:0000481!2.29e-07!347;UBERON:0000369!3.02e-07!4;UBERON:0002435!3.02e-07!4;UBERON:0000204!3.02e-07!4;UBERON:0010082!3.02e-07!4;UBERON:0002298!3.55e-07!8;UBERON:0000064!4.24e-07!219;UBERON:0000923!5.46e-07!604;UBERON:0005291!5.46e-07!604;UBERON:0006598!5.46e-07!604;UBERON:0002532!5.46e-07!604;UBERON:0002050!6.22e-07!605;UBERON:0005423!6.22e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.54e-61;22!UBERON:0001950;1.62e-58;20!UBERON:0000956;1.93e-53;25!UBERON:0000203;1.93e-53;25!UBERON:0001869;1.10e-44;32!UBERON:0001893;2.68e-42;34!UBERON:0003528;1.00e-40;34!UBERON:0002020;1.00e-40;34!UBERON:0002791;3.05e-40;32!UBERON:0002780;1.37e-29;41!UBERON:0001890;1.37e-29;41!UBERON:0002021;4.60e-29;5!UBERON:0000200;3.15e-23;6!UBERON:0000955;1.15e-19;68!UBERON:0000073;2.45e-19;53!UBERON:0002616;2.45e-19;53!UBERON:0001017;4.13e-18;75!UBERON:0001016;1.33e-14;83!UBERON:0001871;2.21e-13;6!UBERON:0002771;3.22e-12;2!UBERON:0001872;5.08e-11;5!UBERON:0001870;1.95e-08;3!UBERON:0011216;7.43e-08;132!UBERON:0002902;2.83e-07;1!UBERON:0002022;2.83e-07;1!UBERON:0009899;2.83e-07;1!UBERON:0002581;6.12e-07;1!UBERON:0001882;6.12e-07;1!UBERON:0003112;6.12e-07;1!UBERON:0011158;6.12e-07;1!UBERON:0007190;6.12e-07;1!UBERON:0003128;6.12e-07;1!UBERON:0005403;6.12e-07;1!UBERON:0001703;6.12e-07;1!UBERON:0002241;6.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.23e-61,22;UBERON:0001950,1.11e-58,20;UBERON:0000956,1.40e-53,25;UBERON:0000203,1.40e-53,25;UBERON:0001869,1.10e-52,32;UBERON:0001893,1.86e-49,34;UBERON:0003528,2.35e-49,34;UBERON:0002020,2.35e-49,34;UBERON:0002791,6.70e-47,32;UBERON:0002780,1.57e-45,41;UBERON:0001890,1.57e-45,41;UBERON:0003080,1.57e-45,41;UBERON:0006240,1.57e-45,41;UBERON:0000955,2.09e-42,68;UBERON:0006238,2.09e-42,68;UBERON:0001017,7.92e-42,81;UBERON:0001016,1.86e-40,89;UBERON:0000073,2.49e-38,53;UBERON:0002616,2.49e-38,53;UBERON:0001049,4.35e-36,56;UBERON:0005068,4.35e-36,56;UBERON:0006241,4.35e-36,56;UBERON:0007135,4.35e-36,56;UBERON:0003056,7.01e-33,61;UBERON:0002021,9.30e-29,5;UBERON:0003075,4.89e-26,82;UBERON:0007284,4.89e-26,82;UBERON:0002346,1.24e-24,86;UBERON:0000200,1.42e-23,6;UBERON:0004121,1.68e-20,171;UBERON:0000924,1.68e-20,171;UBERON:0006601,1.68e-20,171;UBERON:0010371,1.21e-19,104;UBERON:0007023,1.92e-17,114;UBERON:0011216,3.22e-17,223;UBERON:0010314,3.37e-16,132;UBERON:0001871,1.50e-13,6;UBERON:0002771,2.29e-12,2;UBERON:0001872,4.07e-11,5;UBERON:0001870,1.68e-08,3;UBERON:0000025,1.10e-07,192;UBERON:0002902,2.84e-07,1;UBERON:0009899,2.84e-07,1;UBERON:0002022,3.01e-07,1;UBERON:0002581,3.82e-07,1;UBERON:0007190,6.12e-07,1;UBERON:0001882,7.29e-07,1;UBERON:0005403,7.29e-07,1;UBERON:0003112,7.73e-07,1;UBERON:0011158,7.73e-07,1;UBERON:0003128,7.73e-07,1;UBERON:0001703,7.73e-07,1;UBERON:0002241,7.73e-07,1;UBERON:0004761,7.73e-07,1;UBERON:0009617,7.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.651616610620649,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86644406388848,6.8681668787083,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.02044907978036,5.98841394003583,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0.173624994933292,0.885741385813839,0.60298219312704,0,0.774054819518572,0.886642856860642,0.87754158861589,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.404406797884062,0,0,0,0.391329237864179,0,0,0,11.0186194186976,0,0.450970258243478,1.03688191397247,0,0.330991955875499,0.313932918407225,0,0,0,0.173559738335131,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,1.45614830698521,0,0,0,0,0,0,0.343189995723929,0,0.124252535565433,0.235694034616795,0.271808412147228,0.209205692624666,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,4.77137813885582,0.817220436669454,0,0,0,0,0,2.24773359634691,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,1.0342636508924,0.79339561045614,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46431517882356,1.502291168478,0,0.443716206147409,0.496771223531068,2.35192679391592,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0.256241518587947,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0.786329709279482,0.327628914576042,0.169732529954025,0,0,2.23457967189298,0,0,0,0,0,1.22035527683273,2.8339315265117,1.11743701340006,1.02558182120378,9.32665276020357,2.35134658378341,1.13032951942296,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0.261906694481422,0,0,1.35075169236789,0,0.413373593002368,1.33173201407204,10.3925213713462,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.951576261675644,1.71009211263408,0.118193840883968,0.222462803784138,0.078493092850514,0.628462359664008,0.280272163313789,1.82631744101899,0,0,1.28657779517981,0.790068058663633,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0.4582137370881,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0.470317296361523,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,1.56380427439104,10.9087672585094,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.682008283964155,0.535928260312357,3.31667775783512,0.20686599172379,0,0,0,0,0,0.190941474834495,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p2@CAMSAP3 | |||
}} |
Revision as of 21:00, 20 January 2014
Short description: | p2@CAMSAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAMSAP3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -235bp_to_ENST00000160298, ENST00000446248, NM_001080429, NM_020902, uc002mgu.3, uc002mgv.3_5end |
EntrezGene: | CAMSAP3 |
HGNC: | 29307 |
UniProt: | Q9P1Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data