FFCP PHASE1:Hg19::chr2:67753505..67753511,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1718 | |||
|description=CAGE_peak_at_chr2:67753505..67753511,- | |||
|id=chr2:67753505..67753511,- | |||
|ontology_enrichment_celltype=CL:0000569!2.56e-11!4;CL:0000011!2.56e-11!4;CL:0000680!1.03e-08!57;CL:0000056!1.03e-08!57;CL:0000355!1.03e-08!57;CL:0000359!2.54e-08!32;CL:0000222!4.17e-08!119;CL:0000192!7.20e-08!42;CL:0000514!7.20e-08!42;CL:0000187!2.85e-07!54;CL:0002494!4.66e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000569;4.64e-26;4!CL:0002494;7.87e-14;16!CL:0002593;5.52e-13;2!CL:0002595;1.82e-11;5!CL:0000134;9.28e-11;55!CL:0000048;1.61e-10;58!CL:0000359;1.76e-10;32!CL:0000723;1.66e-09;61!CL:0002592;2.81e-09;3!CL:0000214;5.97e-09;3!CL:0000511;8.26e-08;1!CL:0002625;8.26e-08;1!CL:0000216;8.26e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,4.51e-26,4;CL:0000011,4.51e-26,4;CL:0002494,9.01e-14,16;CL:0002593,5.20e-13,2;CL:0002595,2.00e-11,5;CL:0000359,6.12e-11,32;CL:0002592,3.67e-09,3;CL:0000214,7.30e-09,3;CL:0000192,7.57e-08,43;CL:0000514,7.57e-08,43;CL:0000511,8.00e-08,1;CL:0002625,8.00e-08,1;CL:0000216,8.00e-08,1;CL:0000222,5.77e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000011;4.64e-26;4!UBERON:0003124;1.10e-07;1!UBERON:0001045;3.50e-07;1 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.11e-34;14!DOID:120;8.09e-17;27!DOID:193;1.47e-15;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.57e-34,14;DOID:120,6.87e-17,27;DOID:193,1.27e-15,29 | |||
|ontology_enrichment_uberon=UBERON:0004872!6.79e-15!84;UBERON:0000992!5.25e-14!13;UBERON:0000948!4.37e-12!24;UBERON:0005498!4.37e-12!24;UBERON:0004140!4.37e-12!24;UBERON:0009881!4.37e-12!24;UBERON:0004141!4.37e-12!24;UBERON:0003084!4.37e-12!24;UBERON:0007005!4.37e-12!24;UBERON:0004139!4.37e-12!24;UBERON:0004291!4.37e-12!24;UBERON:0002119!9.69e-11!4;UBERON:0004531!9.69e-11!4;UBERON:0007100!2.05e-10!27;UBERON:0000991!5.88e-10!21;UBERON:0009196!5.88e-10!21;UBERON:0009117!5.88e-10!21;UBERON:0005564!5.88e-10!21;UBERON:0000055!8.36e-10!69;UBERON:0002385!1.90e-09!63;UBERON:0001015!1.90e-09!63;UBERON:0000383!1.90e-09!63;UBERON:0004176!2.12e-09!22;UBERON:0004535!8.29e-09!110;UBERON:0001009!2.14e-08!113;UBERON:0001981!2.56e-08!60;UBERON:0007500!2.56e-08!60;UBERON:0004537!2.56e-08!60;UBERON:0006965!2.56e-08!60;UBERON:0002118!2.66e-08!5;UBERON:0004532!2.66e-08!5;UBERON:0004573!3.91e-08!33;UBERON:0004571!3.91e-08!33;UBERON:0002049!6.73e-08!79;UBERON:0007798!6.73e-08!79;UBERON:0001134!7.42e-08!61;UBERON:0002036!7.42e-08!61;UBERON:0003082!7.42e-08!61;UBERON:0000926!8.43e-08!448;UBERON:0004120!8.43e-08!448;UBERON:0006603!8.43e-08!448;UBERON:0003914!1.23e-07!118;UBERON:0004458!2.17e-07!49;UBERON:0003978!2.71e-07!3;UBERON:0009751!2.71e-07!3;UBERON:0000946!2.71e-07!3;UBERON:0002523!2.71e-07!3;UBERON:0005983!2.71e-07!3;UBERON:0002165!2.71e-07!3;UBERON:0002062!2.71e-07!3;UBERON:0007280!2.71e-07!3;UBERON:0001637!7.12e-07!42;UBERON:0003509!7.12e-07!42;UBERON:0004572!7.12e-07!42;UBERON:0003134!7.71e-07!37;UBERON:0000474!7.71e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002119;1.11e-24;4!UBERON:0000992;6.51e-22;13!UBERON:0000991;2.20e-17;21!UBERON:0002456;5.52e-13;2!UBERON:0004573;1.61e-12;33!UBERON:0004571;1.61e-12;33!UBERON:0003834;1.82e-11;5!UBERON:0001533;1.82e-11;5!UBERON:0002118;2.71e-11;5!UBERON:0000948;6.72e-10;22!UBERON:0003498;2.81e-09;3!UBERON:0005985;2.81e-09;3!UBERON:0001621;2.81e-09;3!UBERON:0006915;5.97e-09;3!UBERON:0007616;5.97e-09;3!UBERON:0002217;5.97e-09;3!UBERON:0002018;5.97e-09;3!UBERON:0001637;7.47e-09;42!UBERON:0003509;7.47e-09;42!UBERON:0004572;7.47e-09;42!UBERON:0007100;1.22e-08;25!UBERON:0003513;2.51e-08;7!UBERON:0001136;8.26e-08;1!UBERON:0001343;8.26e-08;1!UBERON:0004910;8.26e-08;1!UBERON:0004813;8.26e-08;1!UBERON:0003100;1.21e-07;41!UBERON:0001154;3.50e-07;1!UBERON:0001153;3.50e-07;1!UBERON:0001282;3.50e-07;1!UBERON:0009854;3.50e-07;1!UBERON:0009842;3.50e-07;1!UBERON:0003704;3.50e-07;1!UBERON:0001171;3.50e-07;1!UBERON:0001172;3.50e-07;1!UBERON:0003134;4.39e-07;33!UBERON:0000474;6.36e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,1.29e-24,4;UBERON:0000992,5.38e-22,13;UBERON:0000991,1.91e-17,21;UBERON:0009196,1.91e-17,21;UBERON:0009117,1.91e-17,21;UBERON:0005564,1.91e-17,21;UBERON:0004176,1.34e-16,22;UBERON:0004872,1.03e-13,83;UBERON:0004573,1.83e-13,33;UBERON:0004571,1.83e-13,33;UBERON:0002456,5.20e-13,2;UBERON:0003834,2.00e-11,5;UBERON:0001533,2.00e-11,5;UBERON:0002118,2.00e-11,5;UBERON:0004458,1.29e-10,49;UBERON:0001637,2.87e-10,42;UBERON:0003509,2.87e-10,42;UBERON:0004572,2.87e-10,42;UBERON:0004535,1.28e-09,109;UBERON:0003134,2.25e-09,37;UBERON:0000474,2.25e-09,37;UBERON:0001009,2.80e-09,112;UBERON:0001621,3.67e-09,3;UBERON:0000948,5.50e-09,24;UBERON:0005498,5.50e-09,24;UBERON:0004140,5.50e-09,24;UBERON:0009881,5.50e-09,24;UBERON:0004141,5.50e-09,24;UBERON:0003084,5.50e-09,24;UBERON:0007005,5.50e-09,24;UBERON:0004139,5.50e-09,24;UBERON:0004291,5.50e-09,24;UBERON:0003133,7.17e-09,48;UBERON:0006915,7.30e-09,3;UBERON:0007616,7.30e-09,3;UBERON:0002217,7.30e-09,3;UBERON:0002018,7.30e-09,3;UBERON:0000055,9.35e-09,68;UBERON:0003100,2.40e-08,41;UBERON:0003513,2.68e-08,7;UBERON:0007100,6.39e-08,27;UBERON:0001136,8.00e-08,1;UBERON:0001343,8.00e-08,1;UBERON:0004910,8.00e-08,1;UBERON:0005154,8.00e-08,1;UBERON:0005295,8.00e-08,1;UBERON:0004813,8.00e-08,1;UBERON:0005297,8.00e-08,1;UBERON:0005294,8.00e-08,1;UBERON:0010141,8.00e-08,1;UBERON:0005891,8.00e-08,1;UBERON:0003914,1.78e-07,117;UBERON:0002049,2.20e-07,78;UBERON:0007798,2.20e-07,78;UBERON:0002323,2.46e-07,46;UBERON:0001154,3.20e-07,1;UBERON:0001153,3.20e-07,1;UBERON:0001045,3.20e-07,1;UBERON:0000926,3.76e-07,315;UBERON:0004120,3.76e-07,315;UBERON:0006603,3.76e-07,315;UBERON:0001282,4.90e-07,1;UBERON:0009842,4.90e-07,1;UBERON:0003704,4.90e-07,1;UBERON:0001171,4.90e-07,1;UBERON:0001172,4.90e-07,1;UBERON:0005156,5.97e-07,59;UBERON:0000990,5.97e-07,59;UBERON:0007500,6.74e-07,59;UBERON:0001981,6.74e-07,59;UBERON:0004537,6.74e-07,59;UBERON:0006965,6.74e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82600395578163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58803092537181,0.925971025153221,2.28304982681518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,3.7983512377401,0,0,0,0.791951872933429,1.20575750823834,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.657017248110473,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,8.03419649220798,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,2.46426864140871,0.532306030317022,0,1.8532421910392,0.572499546967965,0,0,0,0,0,1.59101623962968,0,0.179872457583315,0,0,0,3.17020642346017,2.10629228119491,0,2.92456187557541,1.05650146756755,0,0,0,2.2054613741845,0,0,0,0.655894752046633,0,0,0,0.573645408816206,0,0,0,1.05553817648832,2.30506425071931,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.628817220398664,0,0,0,0,0,0,0,0.919036730290385,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,1.10961172300523,0.947015026375446,0,0,9.38244280427387,8.01523895945167,3.73049281398673,9.01916414936767,3.18593534327405,2.24901556081802,2.48420731002015,1.24411862352257,0,0,55.2948001109764,2.66563648518157,2.84809513243263,1.63663793282303,1.28892668450986,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45939243634291,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | |||
|short_description=p@chr2:67753505..67753511,- | |||
}} |
Revision as of 03:36, 21 January 2014
Short description: | p@chr2:67753505..67753511, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:67753505..67753511, - |
Coexpression cluster: | C1718_mesenchymal_Sertoli_Fibroblast_Mesothelial_Mesenchymal_placenta_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 4.51e-26 | 4 |
migratory trunk neural crest cell | 4.51e-26 | 4 |
cardiocyte | 9.01e-14 | 16 |
smooth muscle cell of the internal thoracic artery | 5.20e-13 | 2 |
smooth muscle cell of the subclavian artery | 2.00e-11 | 5 |
vascular associated smooth muscle cell | 6.12e-11 | 32 |
smooth muscle cell of the coronary artery | 3.67e-09 | 3 |
synovial cell | 7.30e-09 | 3 |
smooth muscle cell | 7.57e-08 | 43 |
smooth muscle myoblast | 7.57e-08 | 43 |
androgen binding protein secreting cell | 8.00e-08 | 1 |
seminiferous tubule epithelial cell | 8.00e-08 | 1 |
Sertoli cell | 8.00e-08 | 1 |
mesodermal cell | 5.77e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.57e-34 | 14 |
female reproductive organ cancer | 6.87e-17 | 27 |
reproductive organ cancer | 1.27e-15 | 29 |