FFCP PHASE1:Hg19::chr2:118572460..118572474,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2741 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-159bp_to_ENST00000474694_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_DDX18_5end | |||
|id=chr2:118572460..118572474,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.60e-60!140;CL:0000037!4.33e-49!172;CL:0000566!4.33e-49!172;CL:0002057!2.15e-47!42;CL:0000988!1.34e-46!182;CL:0002031!6.17e-44!124;CL:0002087!6.27e-44!119;CL:0000860!1.98e-43!45;CL:0002032!1.59e-42!165;CL:0000837!1.59e-42!165;CL:0000766!9.13e-42!76;CL:0000557!3.30e-34!71;CL:0002009!4.81e-31!65;CL:0000839!2.55e-29!70;CL:0000763!5.65e-29!112;CL:0000049!5.65e-29!112;CL:0002194!1.07e-28!63;CL:0000576!1.07e-28!63;CL:0000040!1.07e-28!63;CL:0000559!1.07e-28!63;CL:0002393!2.34e-15!9;CL:0002397!2.34e-15!9;CL:0000094!3.09e-15!8;CL:0000134!3.80e-15!358;CL:0002320!1.97e-14!365;CL:0000081!3.57e-13!11;CL:0000219!1.82e-12!390;CL:0000838!2.62e-12!52;CL:0000791!2.86e-12!18;CL:0000789!2.86e-12!18;CL:0002420!2.86e-12!18;CL:0002419!2.86e-12!18;CL:0000790!2.86e-12!18;CL:0000542!5.94e-12!53;CL:0000051!5.94e-12!53;CL:0000624!1.12e-11!6;CL:0000034!4.34e-09!444;CL:0000048!4.98e-09!430;CL:0000723!1.27e-08!436;CL:0000084!5.53e-08!25;CL:0000827!5.53e-08!25;CL:0000898!4.76e-07!3;CL:0000623!7.97e-07!3;CL:0000825!7.97e-07!3;CL:0000775!8.13e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.19e-25;8!CL:0000860;3.38e-22;33!CL:0002057;3.38e-22;33!CL:0000576;1.69e-19;48!CL:0002393;4.28e-19;6!CL:0002397;4.28e-19;6!CL:0000624;6.18e-19;6!CL:0000766;4.77e-18;69!CL:0000081;5.95e-18;11!CL:0000473;6.94e-16;39!CL:0000234;6.94e-16;39!CL:0002087;7.52e-15;104!CL:0000791;1.09e-12;18!CL:0000789;1.09e-12;18!CL:0002419;1.09e-12;18!CL:0000898;3.78e-11;3!CL:0000623;1.13e-10;3!CL:0000775;1.14e-10;3!CL:0000738;1.23e-10;136!CL:0000226;3.53e-10;3!CL:0000842;3.53e-10;3!CL:0000767;1.07e-09;3!CL:0000084;1.15e-08;25!CL:0000771;2.46e-08;2!CL:0000763;2.49e-08;100!CL:0000815;4.19e-08;2!CL:0000792;4.19e-08;2!CL:0002677;4.19e-08;2!CL:0000542;1.68e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.53e-52,136;CL:0000037,6.97e-42,168;CL:0002087,6.62e-41,115;CL:0000988,3.83e-39,177;CL:0000860,5.67e-38,42;CL:0002057,5.67e-38,42;CL:0000766,3.40e-37,72;CL:0002032,1.34e-36,161;CL:0000837,1.34e-36,161;CL:0002031,1.18e-32,120;CL:0000473,2.07e-32,48;CL:0000234,2.07e-32,48;CL:0000094,2.36e-25,8;CL:0002194,1.22e-24,59;CL:0000576,1.22e-24,59;CL:0000040,1.22e-24,59;CL:0000559,1.22e-24,59;CL:0000763,8.79e-24,108;CL:0000049,8.79e-24,108;CL:0002009,1.22e-23,61;CL:0000557,5.24e-23,67;CL:0000839,2.11e-21,66;CL:0000624,3.78e-19,6;CL:0000081,4.80e-18,11;CL:0002393,1.98e-16,9;CL:0002397,1.98e-16,9;CL:0000134,2.58e-14,354;CL:0002320,8.46e-14,361;CL:0000791,9.23e-13,18;CL:0000789,9.23e-13,18;CL:0002420,9.23e-13,18;CL:0002419,9.23e-13,18;CL:0000790,9.23e-13,18;CL:0000219,5.51e-12,386;CL:0000838,6.06e-12,52;CL:0000542,1.20e-11,53;CL:0000051,1.20e-11,53;CL:0000898,4.11e-11,3;CL:0000623,1.00e-10,3;CL:0000825,1.00e-10,3;CL:0000775,1.04e-10,3;CL:0000226,3.21e-10,3;CL:0000842,3.21e-10,3;CL:0000767,8.78e-10,3;CL:0000048,8.94e-10,427;CL:0000034,9.07e-10,441;CL:0000723,1.80e-09,433;CL:0000084,1.03e-08,25;CL:0000827,1.03e-08,25;CL:0000771,2.46e-08,2;CL:0000815,4.41e-08,2;CL:0000792,4.41e-08,2;CL:0002677,4.41e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.13e-26;42!CL:0000790;1.09e-12;18!CL:0000051;1.68e-07;53!CL:0000049;9.89e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.64e-31!102;UBERON:0003061!4.64e-31!102;UBERON:0002371!1.49e-30!80;UBERON:0001474!1.67e-27!86;UBERON:0002193!6.13e-27!112;UBERON:0004765!1.15e-22!101;UBERON:0001434!1.15e-22!101;UBERON:0002405!1.06e-20!115;UBERON:0002384!1.84e-13!375;UBERON:0002204!6.18e-09!167;UBERON:0003081!1.80e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.66e-20,98;UBERON:0003061,9.66e-20,98;UBERON:0002371,1.50e-19,76;UBERON:0001474,1.14e-17,82;UBERON:0002193,3.03e-17,108;UBERON:0002405,2.34e-16,93;UBERON:0004765,1.49e-15,90;UBERON:0001434,2.18e-13,100;UBERON:0002384,4.27e-13,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.53531759238885,1.85779347979291,0,0,0,0,0,0.880801318004542,6.64794490238253,5.81578897663411,5.64228263861215,0,0,0,0,0,0.242584061187816,0,0.822335776043652,3.09706370895104,0,2.0492856522328,2.12834006899727,11.0318617835718,10.3277549373412,8.12558919566051,0.752969358170419,0.818718450173537,1.79778787556068,9.48860066349798,9.62787081228281,7.67204550958849,0,0.199463657621632,0.852449501065388,0.580418477257168,0.56738522469114,0.622822248995575,1.50749199154046,2.08593167368081,3.69221035998698,0,1.47311054395026,2.21523671208619,1.05627643155971,2.12604299965044,2.51590374610051,4.94245977044578,0.750884464207532,2.25015821375912,0.285012743741249,0.39783335439818,1.0959849225878,0,0,0,0,0.400395987036012,0,0.661044872784862,1.90810750907073,5.12291672198504,2.93618594685469,4.20500550937752,3.96513985737078,0.560508562981536,0,1.96709770113833,1.96505381374582,2.87842098599313,0,6.19252306603822,3.78758244587787,7.79306913631645,0.222820913770347,9.13278313171995,1.32920336750173,2.43723477388514,0,0,0,0.276350017785848,0,4.89345658434799,1.33770414044857,3.1360657141493,0,4.59864592322305,3.09264700934367,4.80737414837055,0.95569624297229,0,0,0,0.383959833463255,0,0.236777252044017,0,3.42731463482045,2.67440195783507,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9916918359339,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92576900504818,3.88129634747131,4.2353201972317,0,0,0,0,0,4.49404214368309,2.99161459204025,7.45947924184864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,4.74571241800957,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0.77380195455795,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@DDX18 | |||
}} |
Revision as of 05:09, 21 January 2014
Short description: | p4@DDX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DDX18_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -159bp_to_ENST00000474694_5end |
EntrezGene: | DDX18 |
HGNC: | 2741 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.66e-20 | 98 |
blood island | 9.66e-20 | 98 |
bone marrow | 1.50e-19 | 76 |
bone element | 1.14e-17 | 82 |
hemolymphoid system | 3.03e-17 | 108 |
immune system | 2.34e-16 | 93 |
skeletal element | 1.49e-15 | 90 |
skeletal system | 2.18e-13 | 100 |
connective tissue | 4.27e-13 | 371 |