FFCP PHASE1:Hg19::chr3:37217852..37217899,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C778 | |||
|description=CAGE_peak_at_chr3:37217852..37217899,+ | |||
|id=chr3:37217852..37217899,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-29!115;UBERON:0001049!2.21e-29!57;UBERON:0005068!2.21e-29!57;UBERON:0006241!2.21e-29!57;UBERON:0007135!2.21e-29!57;UBERON:0002616!1.31e-26!59;UBERON:0000955!9.44e-24!69;UBERON:0006238!9.44e-24!69;UBERON:0003075!1.25e-23!86;UBERON:0007284!1.25e-23!86;UBERON:0003080!1.77e-23!42;UBERON:0002780!3.80e-23!41;UBERON:0001890!3.80e-23!41;UBERON:0006240!3.80e-23!41;UBERON:0001017!1.25e-22!82;UBERON:0002346!4.02e-22!90;UBERON:0005743!6.77e-22!86;UBERON:0002020!7.94e-20!34;UBERON:0003528!7.94e-20!34;UBERON:0001893!1.39e-19!34;UBERON:0000073!3.48e-19!94;UBERON:0001016!3.48e-19!94;UBERON:0002791!3.60e-19!33;UBERON:0001869!2.61e-18!32;UBERON:0003056!1.35e-17!61;UBERON:0000153!9.71e-16!129;UBERON:0007811!9.71e-16!129;UBERON:0000033!7.41e-15!123;UBERON:0002619!2.89e-14!22;UBERON:0000956!3.40e-14!25;UBERON:0000203!3.40e-14!25;UBERON:0001950!5.62e-13!20;UBERON:0004121!2.15e-11!169;UBERON:0000924!6.89e-11!173;UBERON:0006601!6.89e-11!173;UBERON:0002308!3.74e-07!9;UBERON:0000125!3.74e-07!9;UBERON:0003076!3.86e-07!15;UBERON:0003057!3.86e-07!15;UBERON:0002420!9.17e-07!9;UBERON:0007245!9.17e-07!9;UBERON:0010009!9.17e-07!9;UBERON:0010011!9.17e-07!9;UBERON:0000454!9.17e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.05e-19;41!UBERON:0001890;1.05e-19;41!UBERON:0003528;3.08e-19;34!UBERON:0002020;3.08e-19;34!UBERON:0002791;3.27e-19;32!UBERON:0001893;5.68e-19;34!UBERON:0001869;7.99e-19;32!UBERON:0000073;1.57e-17;53!UBERON:0002616;1.57e-17;53!UBERON:0002619;9.78e-17;22!UBERON:0000956;1.39e-15;25!UBERON:0000203;1.39e-15;25!UBERON:0001950;4.03e-15;20!UBERON:0000955;5.57e-12;68!UBERON:0001017;2.93e-11;75!UBERON:0007023;2.36e-09;114!UBERON:0001016;1.00e-08;83!UBERON:0000125;1.31e-08;9!UBERON:0002308;1.31e-08;9!UBERON:0002420;8.99e-08;9!UBERON:0007245;8.99e-08;9!UBERON:0010009;8.99e-08;9!UBERON:0010011;8.99e-08;9!UBERON:0000454;8.99e-08;9!UBERON:0009663;4.57e-07;7!UBERON:0004732;7.59e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.54e-34,56;UBERON:0005068,1.54e-34,56;UBERON:0006241,1.54e-34,56;UBERON:0007135,1.54e-34,56;UBERON:0007023,3.79e-33,114;UBERON:0000073,2.95e-32,53;UBERON:0002616,2.95e-32,53;UBERON:0002780,1.38e-27,41;UBERON:0001890,1.38e-27,41;UBERON:0003080,1.38e-27,41;UBERON:0006240,1.38e-27,41;UBERON:0003075,5.80e-27,82;UBERON:0007284,5.80e-27,82;UBERON:0000955,1.66e-25,68;UBERON:0006238,1.66e-25,68;UBERON:0001017,1.76e-25,81;UBERON:0002346,4.83e-25,86;UBERON:0003528,1.79e-23,34;UBERON:0002020,1.79e-23,34;UBERON:0001893,3.53e-23,34;UBERON:0002791,6.43e-22,32;UBERON:0001016,6.95e-22,89;UBERON:0001869,1.32e-21,32;UBERON:0003056,4.01e-20,61;UBERON:0010371,9.78e-20,104;UBERON:0010314,1.28e-18,132;UBERON:0002619,2.91e-17,22;UBERON:0000956,1.56e-16,25;UBERON:0000203,1.56e-16,25;UBERON:0001950,1.14e-15,20;UBERON:0004121,3.73e-13,171;UBERON:0000924,3.73e-13,171;UBERON:0006601,3.73e-13,171;UBERON:0011216,8.04e-09,223;UBERON:0000125,1.77e-08,9;UBERON:0002308,1.77e-08,9;UBERON:0003076,3.71e-08,15;UBERON:0003057,3.71e-08,15;UBERON:0002420,5.35e-08,9;UBERON:0007245,5.35e-08,9;UBERON:0010009,5.35e-08,9;UBERON:0010011,5.35e-08,9;UBERON:0000454,5.35e-08,9;UBERON:0009663,5.97e-07,7;UBERON:0004732,7.04e-07,13 | |||
|phase1_expression=1.45342703416445,0.428201047781966,0.986680828671798,2.00146596706261,0.893922188854576,1.74467704820074,0,0,1.04474251279935,0.491467873003018,0,0,0.263766978228454,0.495065411840187,0,0.672325146451775,3.01347264011988,2.19093027116212,1.46379839637152,0.61560529038394,1.42800483870977,1.25381888591235,0.85870796139317,1.77936752594749,1.75759695432724,0.916960868975415,0.410502947249729,0.314843125254717,0.786728553697808,0.383829398097213,0.154816123316076,0.919421224478927,0.6024118375565,1.10926203050036,0.697204805222715,0.995184627411951,1.17440175733939,1.66198622559563,0.802177789880567,1.51907609501096,1.11957737119962,1.29557466407592,1.80302897343931,1.45398238779565,1.88937971844405,1.21292030593908,0.929716147622738,0.411167888021826,1.54853185447552,0.863077176966451,1.5369642391746,0.47296445977717,2.06847408441971,1.29096936716765,1.35426486594342,0.941211697713023,1.09162460023138,0.898893937780338,1.53041946185451,1.60464513538047,0.639337125799041,2.63881040149373,0.997318288108159,1.27867425159808,1.7412554317715,0.56738522469114,1.86846674698672,2.51248665256743,1.0429658368404,1.08594422352558,2.42159801053347,3.68277635987565,5.69632297393592,1.05627643155971,0.212604299965044,0.419317291016752,0.22465726229299,0.750884464207532,0.964353520182481,2.56511469367124,1.39241674039363,1.0959849225878,0,1.09227722252426,3.55803701545422,0.426730222566507,3.2031678962881,2.87376219977242,5.2883589822789,2.86216126360609,0,0.587237189370939,1.14681968437569,1.32171328579026,2.80254281490768,0,0.590129310341499,0.786021525498329,0.205601498999509,1.5046784585161,2.28145586643513,1.4203434172042,1.94826728407911,1.00269411196656,0.883817722424512,0.664601683750863,1.08321545506006,1.0247305578054,0.910415432919148,1.31550323682941,2.48715016007264,0.289803085735052,0.593146252648242,1.07016331235885,1.04535523804977,1.13309342697566,0,0.34362744548263,0.506039384039006,2.86708872891687,1.95325036156926,1.90090408889675,1.35517607169996,1.4078527226986,2.49861453104692,0.947109008176067,2.46338399076314,0,0.267440195783507,0.579297615531196,2.43806866313962,0.670700859703636,0.255725123687061,0.722878304769133,0,1.15877215168659,0.795285947051099,1.94653948121054,0.850813354476611,0.665188192387692,0.527008714158756,1.57174890597255,2.18577172975525,1.11235332835329,1.29818957461873,0.522389211897802,1.06366368415092,0.715471872916026,0,0,1.19257444420023,1.72046919021225,0,1.13061588384802,1.25849830862972,0.275118041940067,0.626984899610432,2.06733407335463,1.06729878806013,2.00832367658802,0.805658634218294,0.760272105718513,0.976248230192678,0,1.62028389576352,0.982297011124877,0.673588117878509,1.80178368773316,3.06633274931766,0,0.549605231791222,0,0,1.3082821564276,0.496971951695318,0.379891534993739,1.32409180813219,1.14734648299525,0.354668382198357,1.12135520028461,0,0.74000264525148,0.622422070799533,0.808264032418128,1.47115712802113,1.05950199351452,1.15235184896,0.937285727335186,1.24864030732128,0.570471821544449,0.298897361103602,2.23125547423153,0.971237666208789,1.26405726032024,1.02077085627447,1.59684612505298,1.65321249881225,0,1.7308685049499,0,0,2.35670559535693,2.50237039743928,1.93944880838928,1.31693286264251,0,0.600952235626387,0.226864366320042,0.717558542755448,2.13557388818567,1.48352330811693,2.10063767259082,1.54578793857658,3.60696756063881,1.67505170698431,2.02531598689519,0.779496041289589,1.26216887122057,2.02509777013059,1.61646056818812,0,1.20902517873168,1.01736355386293,0.57978255948989,0.545492241181669,0.860413786167011,0.487894824518382,0.530119073285941,0.929551542956147,1.7622379352613,0.252320850875628,0.36497735907583,0,1.92972281457866,0,2.3218396401599,1.44375896333917,0.591534000199219,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0.588664395376038,0,0.738155454624648,0,1.2347220339942,0,0,0,0,1.32438929824395,0.983907508344908,0.171567810298526,0.329250856225877,0,0.100528972411631,0.833296006426766,1.3032332212413,1.03993478527958,0,1.15930404975077,0.234817388471643,0.433099343283221,0,1.33177906564219,3.1608175918371,0.858486162094873,1.23108503043699,0.468008530278475,0.445893486866185,0,0.335964256397719,0.425325291727159,0.268675568108545,0.290633938513962,0,0.985326475791887,1.32072651019839,1.03664057770386,1.44119953416961,1.13618190083742,0.317489471460845,0.763976851116555,0,0,0.925447434329912,0.901029173531752,0.285826432630578,0.336393253036082,0.87192013766656,0,0.129271715757778,0,0,2.12750493267896,1.04007436911366,0.771622122786426,0,0.532844358032199,1.00084595560703,1.08524321078289,0,0,0.710783897485092,0.791951872933429,0.602878754119172,0,0.499864955910285,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,1.01346914667305,1.02738161275192,0.716243852959582,0.896681151948218,0.394061520403854,0.215627574859517,0.385029108839245,0.508189248444927,1.30139853857622,5.41302168944387,1.34013012267479,1.27587750330633,0,0,0,0.613457458595699,1.00034104211935,0.542530047399471,1.03985430765404,0.713715955188647,0.946214490203608,1.52283839490527,0.601892199455438,0,1.03473071292505,0,1.29058417979192,1.12948698808508,0.783204629850962,0.686286847621712,0,0,0.106727557803444,0.606255142892519,0,0.604780586659361,0.744323423456331,1.99500565274481,0.841980283299221,0.896974044789907,1.02341449813341,0.804269605718038,0,0,0,0.328508624055237,1.03850885836724,0,0.120859449591622,0.40101294060657,1.84161977871793,0.34444334449382,1.0925470080403,2.22911505431021,0,0.539107359730903,0.784349769176855,0,0.73886140225013,0,0.340187410553031,0.215915916102139,0,0.541892875087706,0.501689773854853,0.764628819135115,0,1.34324852833307,0.877039506583738,0.522870902049801,0.512900250232778,0.984043937099117,0.325378394664303,3.09123034943167,1.46511143709349,0.907604499126468,0.574265537996172,0,3.21367859688319,1.06337790121334,0.154048617114644,1.68854042198743,1.7918754422989,2.47066563197029,3.77043404176994,1.96021243057032,0.445160178233687,0.991709492165869,0.960950336825531,2.29702882490251,1.6185244936888,0,1.25924938732256,0.6970372701606,0.924100740528266,0,3.47973196830029,0.37064843820784,0.429374660225974,0.744316738719335,0.949138274156178,1.33441135746677,0,0.855877976067841,0.636406495851874,0,0.359744915166629,1.09814811894422,1.88499843753098,0.808729926293264,0,0.421258456238981,1.46290121726877,0.243713489631284,0,1.09199929126389,0.565621727814851,1.13008116620243,1.10273068709225,0,0,1.15755106853338,0.655894752046633,0.405820753925408,0.6196469961995,0.563391205064483,0.430234056612155,0.294747123039363,1.426684205925,0.354761064070598,0.844430541190656,2.63435914367922,0.379473173765715,2.0996083214699,0.288666338176536,0,2.17781969722645,2.63602642174982,0.86101074534246,0,2.66058092122005,3.44585100310439,1.01489521846434,1.52927441428475,0.569647187174163,1.19115887728894,2.46817363851717,1.94541993357815,1.08006287447623,2.37937552888281,0.320472213382419,0.962479855263359,0.245040215981032,0.743212700502875,0,0.355709216742071,0.797131363644112,0.997896857164083,1.1490322207942,0.423347165447766,1.29848776109822,0.561594356226918,0.228234679033192,0,2.50634477090067,0,0.1605880751037,0.201799707191048,0.851692475380653,1.37402137902306,0.614481528616916,0.671028323677248,0.500547425135725,0.19538809540204,0.278406173895242,2.46174797895425,0,1.33228787199128,4.22961015263549,0,1.61158997199083,0.728163130497081,2.11742430127209,0,0.71623345421307,1.18785872333055,0,1.9882952955326,7.17414023693615,0,1.31843099381408,5.27813520319984,3.38721580026819,2.48655523978033,0,0.20453736500431,0.246169610922139,0.933118762985422,0.179736702294654,0,0.511572370226872,1.479651084554,0,1.11136990144637,1.93866549219044,2.50473865036998,3.99227596002388,1.30213880542617,0.0874599999961957,2.17499872630438,0.341380344856499,1.01701460117107,0.472775363535873,0.689486746482929,1.16641845353302,1.56262495439963,6.20018970069687,8.32115426515315,1.52581736317083,6.3030178160798,2.06883333267483,2.19385397153973,0.435753854075961,0.41827123283581,3.77056266668606,0.341826167541004,0.69169171316418,0.359030577639089,0.869178975376065,0.31900115973192,0.824378340616761,0.533034776018635,0,0.627921025580099,0.831058409500782,0.902382642468723,1.37243774022418,2.3495022176618,1.3282761290693,0.317873157960757,0,0,0.141353071433941,0.649165919226273,4.97630965539252,1.23840590304675,2.4441205797345,0.593042257361244,0.370691816839509,0.417687798021821,6.13350310124161,5.61804353109152,3.74823113160543,0,0.586993856796269,0.242780379534093,1.18375320854817,3.62972148145992,9.79432837217568,0.31593289814244,0.150323419414493,0.207376382794494,1.32930774541437,0.661983911750998,1.56966459203613,1.19472429772959,0.284609546029793,0.416024019039416,0,0.489961987071888,0,3.14508002835654,0.51595809741485,0.580537987734511,0.219267951258557,0.739039113478883,2.03676934625681,0.176512253383001,1.58186518546373,0.274083849293502,1.19228767021794,2.21587785845575,0.586654148204409,0.320635281006135,1.92107695265417,0.19980960958213,0,0.572682980829578,0.171594997861965,0.576219191952599,0.124252535565433,0.707082103850386,0.543616824294456,0.732219924186332,0.203996435272644,1.15580235960608,16.2113477951643,9.8571872802235,2.55493176133945,1.28929632425987,0.525774708558629,4.74780082162832,5.95817102430378,0.717873024576814,0.599037001496973,1.71690419254628,1.78537165953498,1.88113722962834,2.88239906833923,1.16495949527454,0.709048640765013,0.164831716762333,0,0.295282444544246,0.338693328263138,8.74752658790234,9.26183161558714,0.160753148465019,0,0,0.899895566206002,0,2.73373004961111,0.670869375198532,0.630445658393585,2.25554728980492,0,0.896436696664224,0.959575986597226,1.42939065274673,0.662091970365432,0.5085370753095,0,1.72844298240254,0.326587360109409,2.39460383124975,0.410462603746695,0.681552087141687,0.453248366080503,0,0,7.23984555624683,6.74386268887719,0,0.704815022316672,1.38823636338003,2.04365596629566,3.31391244277756,1.48849806543585,0,0,1.27668251554036,1.08803560673895,1.5041393641362,1.22538230705385,1.31149052283922,0.471162288750703,7.08854543973589,6.71144456960797,9.01374701086799,4.58727356552057,7.2103883498954,4.22255540001407,0.691743174681154,0.624902039810533,0.454947352624943,0.570930667089935,0.941063278792687,1.87333962322753,1.30428925749743,0,0.233713309847224,0.554805861502613,0.378806010550178,0.251567901752575,0.889811221596536,0.915360273587694,0.302461847526478,0.310874401165561,0,0.318593534327405,0.449803112163605,0.465788870628778,0,0.797525143673985,0,0.300515217994437,1.14241563650639,0,0.545545977607678,0.214821114084977,1.85613503951397,0.398095888698616,0,0.686791410365586,1.34699795506368,3.78554694685953,1.73357847366573,2.35885750512418,0.260994291965212,0.226705925512272,0.694567422971502,0.489473409012935,2.14906609297785,0,0.438568099157414,0.530067437837643,0.38582807654183,0.844712203265363,3.07489822305536,0.345430341731199,0,7.60421398834519,0.194860308839388,1.72724292407372,1.79921933681429,1.31043939538565,0.491545817507439,0.211312123358627,0.59996218756479,0.320075189082423,1.37771983728653,1.13503190713367,0.368211900503681,0.419638523158333,0.622077260032973,0.383683113910955,0.431299245586727,0.471797825567689,1.09209638192014,0.169732529954025,1.2754495206101,0.247871528518004,0,0.954013051960256,2.68129933004261,0,1.05802783107205,0.6124909547064,3.3399197050159,15.5866233958143,11.3340039930577,3.89721092057435,12.8556565073076,2.97376185596137,5.65164759711479,15.704636228507,0.196295437002051,0.707818340086442,0,0.115525666150338,0.381382095467167,0.690359926060101,0,1.95546853708069,0.80682027481408,0.781514011233092,0,0.818859587550484,0.295712172434091,2.4988906308806,11.7161714792077,6.82066428453907,3.29762213008315,8.75159694429151,0,2.48105589194647,0.879356221798103,0,7.49982570229601,6.72567444437648,1.21393120847326,2.73194629621557,2.04015451374069,0.115233987555779,2.57232014156128,2.92269851800376,1.71009211263408,0.236387681767936,0.111231401892069,2.19780659981439,6.59885477647208,0.280272163313789,10.0447459256045,0.431855182437243,1.9110067515482,2.50167904618297,0.790068058663633,0.464965701472501,0,2.40513409419076,0,1.53646629384555,1.38251932362818,0.430227358820278,0.354996002191696,0.426067023795788,2.11693525095465,1.60374807980835,0.62041277132864,0.955538938977433,0.111855431797792,0,0.121917924982269,0,0.718639647993729,0,2.91426595835484,0.233939463462106,0.994753875806841,0,0.11294608203896,0.989464650708862,0.905777061400041,0.694567422971502,1.74847648403166,0,2.45148321753905,0.471353094203252,9.03018948728748,6.53502080719589,3.3812458206672,1.35941691750254,0.939839179798536,1.99819452718089,0.0999411559249289,0.357107877211315,0.705789743431384,0.320965466756673,2.92134555298607,1.37618785021362,10.177110403753,0.315543124386369,3.46756599973665,10.9087672585094,2.1161073620616,1.11598505450025,2.77305377178851,2.59575937274273,0.252332849670158,0.546327859818478,0.633492505057185,0.101988829741982,0.801652215796681,0.18378979906969,0.50141507858475,1.74291005901951,0.803892390468535,13.2667110313405,10.1364335944657,2.98527574661373,3.57096647195611,2.26061184426021,3.1037357147929,1.79410980128981,2.67318064768293,2.42540626749863,1.08858373948481,1.71116650542641,1.21233695426258,0.430333232356058,2.32862249582209,0.0814032686109745,0.426909383510862,0,0.0898252021065869,0,3.54500188130313,2.84827324821017,5.3260541934841,0.805095174364105,0.641136984606466 | |||
|short_description=p@chr3:37217852..37217899,+ | |||
}} |
Revision as of 18:12, 21 January 2014
Short description: | p@chr3:37217852..37217899, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:37217852..37217899, + |
Coexpression cluster: | C778_thalamus_substantia_optic_spinal_globus_hippocampus_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data