FFCP PHASE1:Hg19::chr3:58552139..58552144,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C550 | |||
|description=CAGE_peak_at_chr3:58552139..58552144,- | |||
|id=chr3:58552139..58552144,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.66e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.43e-70!57;UBERON:0005068!2.43e-70!57;UBERON:0006241!2.43e-70!57;UBERON:0007135!2.43e-70!57;UBERON:0007023!6.19e-61!115;UBERON:0002616!1.15e-59!59;UBERON:0000955!1.45e-52!69;UBERON:0006238!1.45e-52!69;UBERON:0001017!7.62e-52!82;UBERON:0002020!7.74e-51!34;UBERON:0003528!7.74e-51!34;UBERON:0001893!8.52e-51!34;UBERON:0002780!1.28e-49!41;UBERON:0001890!1.28e-49!41;UBERON:0006240!1.28e-49!41;UBERON:0003075!1.38e-49!86;UBERON:0007284!1.38e-49!86;UBERON:0005743!4.51e-49!86;UBERON:0003080!2.60e-48!42;UBERON:0002791!6.21e-48!33;UBERON:0002346!5.26e-47!90;UBERON:0001869!9.96e-45!32;UBERON:0000073!1.14e-43!94;UBERON:0001016!1.14e-43!94;UBERON:0002619!5.39e-33!22;UBERON:0003056!1.74e-31!61;UBERON:0001950!2.11e-31!20;UBERON:0000033!5.27e-30!123;UBERON:0000956!9.32e-29!25;UBERON:0000203!9.32e-29!25;UBERON:0000153!3.19e-28!129;UBERON:0007811!3.19e-28!129;UBERON:0002308!1.02e-25!9;UBERON:0000125!1.02e-25!9;UBERON:0000025!4.37e-25!194;UBERON:0004121!1.43e-23!169;UBERON:0004111!2.46e-23!241;UBERON:0000924!8.03e-23!173;UBERON:0006601!8.03e-23!173;UBERON:0003076!2.01e-22!15;UBERON:0003057!2.01e-22!15;UBERON:0000477!2.63e-20!286;UBERON:0002420!3.53e-20!9;UBERON:0007245!3.53e-20!9;UBERON:0010009!3.53e-20!9;UBERON:0010011!3.53e-20!9;UBERON:0000454!3.53e-20!9;UBERON:0009663!3.12e-19!7;UBERON:0004733!3.00e-18!12;UBERON:0002028!3.00e-18!12;UBERON:0007277!3.00e-18!12;UBERON:0004732!9.67e-17!13;UBERON:0002298!7.13e-16!8;UBERON:0000369!1.88e-15!4;UBERON:0002435!1.88e-15!4;UBERON:0000204!1.88e-15!4;UBERON:0010082!1.88e-15!4;UBERON:0000200!3.23e-15!6;UBERON:0002680!4.99e-14!9;UBERON:0001895!4.99e-14!9;UBERON:0010092!4.99e-14!9;UBERON:0000483!8.04e-14!309;UBERON:0000119!1.37e-13!312;UBERON:0005383!1.45e-12!3;UBERON:0005382!1.45e-12!3;UBERON:0002771!3.45e-12!3;UBERON:0001872!6.21e-12!5;UBERON:0001871!6.24e-12!7;UBERON:0006331!9.40e-12!3;UBERON:0000988!3.10e-11!3;UBERON:0000064!3.29e-10!219;UBERON:0001873!5.37e-09!2;UBERON:0010122!5.37e-09!2;UBERON:0000475!7.84e-09!365;UBERON:0002148!2.81e-08!2;UBERON:0009662!2.81e-08!2;UBERON:0000481!3.68e-08!347;UBERON:0000062!9.62e-08!511;UBERON:0000349!2.12e-07!5;UBERON:0002021!2.99e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000349;1.69e-32;5!UBERON:0001871;1.44e-23;6!UBERON:0002771;4.66e-21;2!UBERON:0001876;4.66e-21;2!UBERON:0001897;4.66e-21;2!UBERON:0001873;4.66e-21;2!UBERON:0001954;4.66e-21;2!UBERON:0003022;4.66e-21;2!UBERON:0002421;4.66e-21;2!UBERON:0010225;4.66e-21;2!UBERON:0002600;4.66e-21;2!UBERON:0002780;1.32e-20;41!UBERON:0001890;1.32e-20;41!UBERON:0002791;6.29e-20;32!UBERON:0001869;6.29e-20;32!UBERON:0002420;1.35e-18;9!UBERON:0007245;1.35e-18;9!UBERON:0010009;1.35e-18;9!UBERON:0010011;1.35e-18;9!UBERON:0000454;1.35e-18;9!UBERON:0003528;4.04e-18;34!UBERON:0002020;4.04e-18;34!UBERON:0001893;4.04e-18;34!UBERON:0002619;2.71e-16;22!UBERON:0005383;1.60e-14;3!UBERON:0005382;1.60e-14;3!UBERON:0000956;1.62e-14;25!UBERON:0000203;1.62e-14;25!UBERON:0000073;1.34e-12;53!UBERON:0002616;1.34e-12;53!UBERON:0000369;3.10e-11;4!UBERON:0002435;3.10e-11;4!UBERON:0002784;3.10e-11;4!UBERON:0000204;3.10e-11;4!UBERON:0001950;1.42e-08;20!UBERON:0000200;6.33e-08;6!UBERON:0001017;2.03e-07;75!UBERON:0001894;5.70e-07;7!UBERON:0009663;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000349,1.44e-32,5;UBERON:0002780,4.07e-24,41;UBERON:0001890,4.07e-24,41;UBERON:0003080,4.07e-24,41;UBERON:0006240,4.07e-24,41;UBERON:0001871,1.61e-23,6;UBERON:0001954,3.11e-21,2;UBERON:0003022,3.11e-21,2;UBERON:0002421,3.11e-21,2;UBERON:0002600,3.11e-21,2;UBERON:0001873,3.81e-21,2;UBERON:0010122,3.81e-21,2;UBERON:0002771,4.66e-21,2;UBERON:0001876,5.70e-21,2;UBERON:0001897,6.96e-21,2;UBERON:0010225,6.96e-21,2;UBERON:0002791,7.06e-20,32;UBERON:0001869,7.06e-20,32;UBERON:0000073,6.22e-19,53;UBERON:0002616,6.22e-19,53;UBERON:0003528,8.68e-19,34;UBERON:0002020,8.68e-19,34;UBERON:0001893,8.68e-19,34;UBERON:0002420,1.35e-18,9;UBERON:0007245,1.35e-18,9;UBERON:0010009,1.35e-18,9;UBERON:0010011,1.35e-18,9;UBERON:0000454,1.35e-18,9;UBERON:0001049,5.63e-18,56;UBERON:0005068,5.63e-18,56;UBERON:0006241,5.63e-18,56;UBERON:0007135,5.63e-18,56;UBERON:0003056,1.38e-16,61;UBERON:0002619,2.57e-16,22;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0005383,1.40e-14,3;UBERON:0005382,1.40e-14,3;UBERON:0000956,1.55e-14,25;UBERON:0000203,1.55e-14,25;UBERON:0001017,1.45e-12,81;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,5.13e-12,86;UBERON:0001016,2.13e-11,89;UBERON:0000369,2.80e-11,4;UBERON:0002435,2.80e-11,4;UBERON:0000204,2.80e-11,4;UBERON:0010082,2.80e-11,4;UBERON:0002784,3.79e-11,4;UBERON:0010371,4.61e-10,104;UBERON:0007023,2.58e-09,114;UBERON:0001950,1.48e-08,20;UBERON:0010314,4.60e-08,132;UBERON:0000200,6.34e-08,6;UBERON:0009663,5.38e-07,7;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.60298219312704,0,0.442317039724898,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,1.90684768556206,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,1.70836770862748,0.3755727921195,0,0.776503360757966,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0.41023272848151,0,0.207471757392654,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0.826747186004736,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03432995861895,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.402547587182052,0 | |||
|short_description=p@chr3:58552139..58552144,- | |||
}} |
Revision as of 19:28, 21 January 2014
Short description: | p@chr3:58552139..58552144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:58552139..58552144, - |
Coexpression cluster: | C550_hippocampus_amygdala_globus_medial_occipital_thalamus_middle |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data