FFCP PHASE1:Hg19::chr3:126194815..126194848,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79364 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28160 | |||
|TSSclassifier=strong | |||
|UniProt=Q2QGD7 | |||
|association_with_transcript=-53bp_to_ENST00000389709,NM_001040653,NM_025112,uc003eiv.2,uc003eix.2,uc010hsh.2_5end | |||
|description=CAGE_peak_2_at_ZXDC_5end | |||
|id=chr3:126194815..126194848,- | |||
|ontology_enrichment_celltype=CL:0000037!1.42e-14!172;CL:0000566!1.42e-14!172;CL:0002057!1.30e-13!42;CL:0000988!1.31e-13!182;CL:0000738!3.70e-13!140;CL:0000860!1.00e-12!45;CL:0002032!3.36e-12!165;CL:0000837!3.36e-12!165;CL:0002087!2.50e-11!119;CL:0000766!3.40e-10!76;CL:0002031!5.09e-10!124;CL:0000763!2.50e-09!112;CL:0000049!2.50e-09!112;CL:0000557!5.11e-08!71;CL:0002194!5.32e-08!63;CL:0000576!5.32e-08!63;CL:0000040!5.32e-08!63;CL:0000559!5.32e-08!63;CL:0000839!7.86e-08!70;CL:0002009!1.03e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.90e-11;33!CL:0002057;5.90e-11;33!CL:0000576;1.33e-09;48!CL:0000473;4.88e-07;39!CL:0000234;4.88e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.75e-15,168;CL:0000738,8.08e-15,136;CL:0000860,1.52e-14,42;CL:0002057,1.52e-14,42;CL:0000988,5.40e-14,177;CL:0002032,1.08e-12,161;CL:0000837,1.08e-12,161;CL:0002087,1.62e-12,115;CL:0000766,7.89e-12,72;CL:0000473,1.33e-11,48;CL:0000234,1.33e-11,48;CL:0002031,3.32e-11,120;CL:0000763,6.10e-10,108;CL:0000049,6.10e-10,108;CL:0000557,1.38e-09,67;CL:0002194,1.99e-09,59;CL:0000576,1.99e-09,59;CL:0000040,1.99e-09,59;CL:0000559,1.99e-09,59;CL:0000839,2.97e-09,66;CL:0002009,3.49e-09,61 | |||
|ontology_enrichment_development_v019=CL:0002057;4.71e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.77e-17!115;UBERON:0001017!1.81e-17!82;UBERON:0000073!6.56e-17!94;UBERON:0001016!6.56e-17!94;UBERON:0001049!2.15e-16!57;UBERON:0005068!2.15e-16!57;UBERON:0006241!2.15e-16!57;UBERON:0007135!2.15e-16!57;UBERON:0005743!3.66e-16!86;UBERON:0000955!3.11e-13!69;UBERON:0006238!3.11e-13!69;UBERON:0002616!3.85e-13!59;UBERON:0003080!8.90e-13!42;UBERON:0002780!1.27e-12!41;UBERON:0001890!1.27e-12!41;UBERON:0006240!1.27e-12!41;UBERON:0002346!1.17e-10!90;UBERON:0001893!3.83e-10!34;UBERON:0002020!4.95e-10!34;UBERON:0003528!4.95e-10!34;UBERON:0002791!8.15e-10!33;UBERON:0003075!3.45e-09!86;UBERON:0007284!3.45e-09!86;UBERON:0001869!3.92e-09!32;UBERON:0002390!4.49e-08!102;UBERON:0003061!4.49e-08!102;UBERON:0002619!7.56e-07!22;UBERON:0000956!8.32e-07!25;UBERON:0000203!8.32e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.50e-10;41!UBERON:0001890;2.50e-10;41!UBERON:0000073;3.41e-10;53!UBERON:0002616;3.41e-10;53!UBERON:0001893;2.74e-09;34!UBERON:0003528;5.76e-09;34!UBERON:0002020;5.76e-09;34!UBERON:0002791;8.07e-09;32!UBERON:0001869;1.25e-08;32!UBERON:0002619;2.10e-07;22!UBERON:0001950;5.20e-07;20!UBERON:0001017;6.36e-07;75!UBERON:0000956;6.39e-07;25!UBERON:0000203;6.39e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.47e-19,114;UBERON:0001016,2.72e-18,89;UBERON:0001017,7.93e-18,81;UBERON:0001049,3.94e-17,56;UBERON:0005068,3.94e-17,56;UBERON:0006241,3.94e-17,56;UBERON:0007135,3.94e-17,56;UBERON:0000073,4.67e-16,53;UBERON:0002616,4.67e-16,53;UBERON:0002780,1.87e-13,41;UBERON:0001890,1.87e-13,41;UBERON:0003080,1.87e-13,41;UBERON:0006240,1.87e-13,41;UBERON:0000955,3.21e-13,68;UBERON:0006238,3.21e-13,68;UBERON:0002346,4.86e-12,86;UBERON:0001893,1.03e-10,34;UBERON:0003528,1.36e-10,34;UBERON:0002020,1.36e-10,34;UBERON:0003075,2.31e-10,82;UBERON:0007284,2.31e-10,82;UBERON:0002791,8.77e-10,32;UBERON:0001869,1.32e-09,32;UBERON:0002390,1.97e-09,98;UBERON:0003061,1.97e-09,98;UBERON:0002193,1.14e-07,108;UBERON:0002371,1.25e-07,76;UBERON:0002619,2.35e-07,22;UBERON:0003056,2.68e-07,61;UBERON:0001474,4.49e-07,82;UBERON:0000956,4.82e-07,25;UBERON:0000203,4.82e-07,25;UBERON:0001950,6.51e-07,20;UBERON:0002405,7.33e-07,93 | |||
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| |||
|short_description=p2@ZXDC | |||
}} |
Revision as of 21:07, 21 January 2014
Short description: | p2@ZXDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZXDC_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_ENST00000389709, NM_001040653, NM_025112, uc003eiv.2, uc003eix.2, uc010hsh.2_5end |
EntrezGene: | ZXDC |
HGNC: | 28160 |
UniProt: | Q2QGD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.75e-15 | 168 |
leukocyte | 8.08e-15 | 136 |
classical monocyte | 1.52e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-14 | 42 |
hematopoietic cell | 5.40e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.08e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-12 | 161 |
nongranular leukocyte | 1.62e-12 | 115 |
myeloid leukocyte | 7.89e-12 | 72 |
defensive cell | 1.33e-11 | 48 |
phagocyte | 1.33e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 3.32e-11 | 120 |
myeloid cell | 6.10e-10 | 108 |
common myeloid progenitor | 6.10e-10 | 108 |
granulocyte monocyte progenitor cell | 1.38e-09 | 67 |
monopoietic cell | 1.99e-09 | 59 |
monocyte | 1.99e-09 | 59 |
monoblast | 1.99e-09 | 59 |
promonocyte | 1.99e-09 | 59 |
myeloid lineage restricted progenitor cell | 2.97e-09 | 66 |
macrophage dendritic cell progenitor | 3.49e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.47e-19 | 114 |
nervous system | 2.72e-18 | 89 |
central nervous system | 7.93e-18 | 81 |
neural tube | 3.94e-17 | 56 |
neural rod | 3.94e-17 | 56 |
future spinal cord | 3.94e-17 | 56 |
neural keel | 3.94e-17 | 56 |
regional part of nervous system | 4.67e-16 | 53 |
regional part of brain | 4.67e-16 | 53 |
regional part of forebrain | 1.87e-13 | 41 |
forebrain | 1.87e-13 | 41 |
anterior neural tube | 1.87e-13 | 41 |
future forebrain | 1.87e-13 | 41 |
brain | 3.21e-13 | 68 |
future brain | 3.21e-13 | 68 |
neurectoderm | 4.86e-12 | 86 |
telencephalon | 1.03e-10 | 34 |
brain grey matter | 1.36e-10 | 34 |
gray matter | 1.36e-10 | 34 |
neural plate | 2.31e-10 | 82 |
presumptive neural plate | 2.31e-10 | 82 |
regional part of telencephalon | 8.77e-10 | 32 |
cerebral hemisphere | 1.32e-09 | 32 |
hematopoietic system | 1.97e-09 | 98 |
blood island | 1.97e-09 | 98 |
hemolymphoid system | 1.14e-07 | 108 |
bone marrow | 1.25e-07 | 76 |
regional part of cerebral cortex | 2.35e-07 | 22 |
pre-chordal neural plate | 2.68e-07 | 61 |
bone element | 4.49e-07 | 82 |
cerebral cortex | 4.82e-07 | 25 |
pallium | 4.82e-07 | 25 |
neocortex | 6.51e-07 | 20 |
immune system | 7.33e-07 | 93 |