FFCP PHASE1:Hg19::chr4:74606277..74606293,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6025 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000483500_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_IL8_5end | |||
|id=chr4:74606277..74606293,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.62e-23!42;CL:0000766!9.55e-23!76;CL:0000860!2.90e-21!45;CL:0002009!3.52e-20!65;CL:0002194!3.64e-19!63;CL:0000576!3.64e-19!63;CL:0000040!3.64e-19!63;CL:0000559!3.64e-19!63;CL:0000557!8.19e-19!71;CL:0002371!2.03e-18!591;CL:0000048!6.90e-17!430;CL:0000839!9.83e-17!70;CL:0000723!5.21e-16!436;CL:0000034!2.03e-15!444;CL:0000012!3.47e-15!682;CL:0000144!9.11e-15!625;CL:0000763!1.02e-14!112;CL:0000049!1.02e-14!112;CL:0000359!1.56e-14!32;CL:0000548!3.22e-14!679;CL:0000004!3.22e-14!679;CL:0000255!3.22e-14!679;CL:0000738!2.85e-10!140;CL:0000003!3.83e-10!722;CL:0000680!5.29e-10!57;CL:0000056!5.29e-10!57;CL:0000355!5.29e-10!57;CL:0000222!1.12e-09!119;CL:0000192!1.65e-09!42;CL:0000514!1.65e-09!42;CL:0000187!4.28e-09!54;CL:0000063!1.27e-08!578;CL:0000183!2.31e-08!59;CL:0000134!4.88e-08!358;CL:0002320!9.56e-08!365;CL:0000393!4.34e-07!60;CL:0000211!4.34e-07!60;CL:0000037!5.80e-07!172;CL:0000566!5.80e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.58e-18;33!CL:0002057;2.58e-18;33!CL:0000473;1.11e-16;39!CL:0000234;1.11e-16;39!CL:0000359;7.63e-14;32!CL:0000576;5.64e-12;48!CL:0000766;6.41e-11;69!CL:0000192;5.78e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.35e-24,48;CL:0000234,1.35e-24,48;CL:0000766,2.07e-23,72;CL:0000860,5.81e-23,42;CL:0002057,5.81e-23,42;CL:0002009,8.47e-21,61;CL:0002194,9.21e-20,59;CL:0000576,9.21e-20,59;CL:0000040,9.21e-20,59;CL:0000559,9.21e-20,59;CL:0000557,2.31e-19,67;CL:0000839,4.64e-17,66;CL:0000048,2.04e-16,427;CL:0000723,1.29e-15,433;CL:0000034,5.73e-15,441;CL:0000763,8.56e-15,108;CL:0000049,8.56e-15,108;CL:0000359,1.32e-14,32;CL:0000738,5.06e-10,136;CL:0000680,9.60e-10,58;CL:0000056,9.60e-10,58;CL:0000355,9.60e-10,58;CL:0000222,1.32e-09,121;CL:0000192,3.45e-09,43;CL:0000514,3.45e-09,43;CL:0000187,7.65e-09,55;CL:0000134,9.52e-08,354;CL:0002320,1.85e-07,361;CL:0000393,5.05e-07,61;CL:0000211,5.05e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;8.68e-17;42!CL:0000514;5.78e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.78e-25!216;UBERON:0004535!2.33e-21!110;UBERON:0001009!2.67e-20!113;UBERON:0002204!3.30e-19!167;UBERON:0002049!4.23e-18!79;UBERON:0007798!4.23e-18!79;UBERON:0001637!2.18e-17!42;UBERON:0003509!2.18e-17!42;UBERON:0004572!2.18e-17!42;UBERON:0000055!1.36e-16!69;UBERON:0002193!7.12e-16!112;UBERON:0002371!7.86e-16!80;UBERON:0001981!7.96e-16!60;UBERON:0007500!7.96e-16!60;UBERON:0004537!7.96e-16!60;UBERON:0006965!7.96e-16!60;UBERON:0004872!5.19e-15!84;UBERON:0002390!1.99e-14!102;UBERON:0003061!1.99e-14!102;UBERON:0000926!2.39e-14!448;UBERON:0004120!2.39e-14!448;UBERON:0006603!2.39e-14!448;UBERON:0004573!3.37e-14!33;UBERON:0004571!3.37e-14!33;UBERON:0001474!1.00e-12!86;UBERON:0003914!1.11e-12!118;UBERON:0004765!1.53e-11!101;UBERON:0001434!1.53e-11!101;UBERON:0002405!1.68e-11!115;UBERON:0000486!3.88e-09!82;UBERON:0001134!2.09e-08!61;UBERON:0002036!2.09e-08!61;UBERON:0003082!2.09e-08!61;UBERON:0004290!2.29e-08!70;UBERON:0000947!7.43e-08!21;UBERON:0010191!7.43e-08!21;UBERON:0002385!1.04e-07!63;UBERON:0001015!1.04e-07!63;UBERON:0000383!1.04e-07!63;UBERON:0000490!1.93e-07!138;UBERON:0000914!3.08e-07!83;UBERON:0002329!3.08e-07!83;UBERON:0003077!3.08e-07!83;UBERON:0003059!3.08e-07!83;UBERON:0007282!3.08e-07!83;UBERON:0009618!3.08e-07!83;UBERON:0007285!3.08e-07!83;UBERON:0002384!9.28e-07!375;UBERON:0000467!9.45e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.21e-13;33!UBERON:0004571;4.21e-13;33!UBERON:0001637;2.18e-12;42!UBERON:0003509;2.18e-12;42!UBERON:0004572;2.18e-12;42!UBERON:0007500;7.02e-09;56!UBERON:0001981;7.02e-09;56!UBERON:0004537;7.02e-09;56!UBERON:0000055;2.23e-08;65!UBERON:0002049;2.50e-08;75!UBERON:0007798;2.50e-08;75!UBERON:0000947;6.66e-08;21!UBERON:0010191;6.66e-08;21 | |||
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| |||
|short_description=p1@IL8 | |||
}} |
Revision as of 01:33, 22 January 2014
Short description: | p1@IL8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL8_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000483500_5end |
EntrezGene: | IL8 |
HGNC: | 6025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.35e-24 | 48 |
phagocyte | 1.35e-24 | 48 |
myeloid leukocyte | 2.07e-23 | 72 |
classical monocyte | 5.81e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.81e-23 | 42 |
macrophage dendritic cell progenitor | 8.47e-21 | 61 |
monopoietic cell | 9.21e-20 | 59 |
monocyte | 9.21e-20 | 59 |
monoblast | 9.21e-20 | 59 |
promonocyte | 9.21e-20 | 59 |
granulocyte monocyte progenitor cell | 2.31e-19 | 67 |
myeloid lineage restricted progenitor cell | 4.64e-17 | 66 |
multi fate stem cell | 2.04e-16 | 427 |
somatic stem cell | 1.29e-15 | 433 |
stem cell | 5.73e-15 | 441 |
myeloid cell | 8.56e-15 | 108 |
common myeloid progenitor | 8.56e-15 | 108 |
vascular associated smooth muscle cell | 1.32e-14 | 32 |
leukocyte | 5.06e-10 | 136 |
muscle precursor cell | 9.60e-10 | 58 |
myoblast | 9.60e-10 | 58 |
multi-potent skeletal muscle stem cell | 9.60e-10 | 58 |
mesodermal cell | 1.32e-09 | 121 |
smooth muscle cell | 3.45e-09 | 43 |
smooth muscle myoblast | 3.45e-09 | 43 |
muscle cell | 7.65e-09 | 55 |
mesenchymal cell | 9.52e-08 | 354 |
connective tissue cell | 1.85e-07 | 361 |
electrically responsive cell | 5.05e-07 | 61 |
electrically active cell | 5.05e-07 | 61 |