FFCP PHASE1:Hg19::chr4:74608512..74608561,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6025 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-293bp_to_AJ227913_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_IL8_5end | |||
|id=chr4:74608512..74608561,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.53e-36!42;CL:0000766!1.26e-33!76;CL:0000860!5.05e-33!45;CL:0002009!5.40e-30!65;CL:0002194!5.82e-28!63;CL:0000576!5.82e-28!63;CL:0000040!5.82e-28!63;CL:0000559!5.82e-28!63;CL:0000557!3.12e-26!71;CL:0000839!8.63e-24!70;CL:0000763!1.23e-21!112;CL:0000049!1.23e-21!112;CL:0000359!1.30e-18!32;CL:0000048!9.31e-17!430;CL:0000738!2.02e-16!140;CL:0000723!4.49e-16!436;CL:0000034!7.57e-16!444;CL:0000192!1.47e-13!42;CL:0000514!1.47e-13!42;CL:0002087!3.02e-12!119;CL:0000094!4.45e-12!8;CL:0000037!1.55e-11!172;CL:0000566!1.55e-11!172;CL:0000680!2.01e-11!57;CL:0000056!2.01e-11!57;CL:0000355!2.01e-11!57;CL:0002032!9.76e-11!165;CL:0000837!9.76e-11!165;CL:0002031!1.37e-10!124;CL:0000187!1.37e-10!54;CL:0000988!1.46e-10!182;CL:0000183!7.40e-10!59;CL:0000393!8.70e-09!60;CL:0000211!8.70e-09!60;CL:0000012!1.30e-08!682;CL:0002539!1.89e-08!10;CL:0002371!2.40e-08!591;CL:0000548!2.85e-08!679;CL:0000004!2.85e-08!679;CL:0000255!2.85e-08!679;CL:0000081!3.26e-08!11;CL:0002595!5.79e-08!5;CL:0000144!2.34e-07!625;CL:0000134!2.62e-07!358;CL:0000003!6.20e-07!722;CL:0002320!8.79e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-50;33!CL:0002057;1.33e-50;33!CL:0000473;4.52e-39;39!CL:0000234;4.52e-39;39!CL:0000576;1.77e-28;48!CL:0000359;2.56e-27;32!CL:0000766;6.49e-24;69!CL:0000094;8.43e-18;8!CL:0000192;5.53e-15;43!CL:0002595;3.52e-14;5!CL:0002539;1.06e-12;10!CL:0000081;1.25e-12;11!CL:0000763;1.05e-10;100!CL:0000775;4.03e-10;3!CL:0000187;1.99e-08;55!CL:0000738;3.06e-08;136!CL:0002087;4.92e-08;104!CL:0000771;1.56e-07;2!CL:0002594;6.87e-07;4!CL:0002593;8.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.48e-53,42;CL:0002057,4.48e-53,42;CL:0000473,4.95e-52,48;CL:0000234,4.95e-52,48;CL:0000766,1.16e-49,72;CL:0002009,1.40e-43,61;CL:0002194,7.75e-40,59;CL:0000576,7.75e-40,59;CL:0000040,7.75e-40,59;CL:0000559,7.75e-40,59;CL:0000557,6.58e-39,67;CL:0000839,9.49e-35,66;CL:0000763,2.26e-33,108;CL:0000049,2.26e-33,108;CL:0000359,1.16e-29,32;CL:0000738,2.68e-27,136;CL:0000192,1.04e-20,43;CL:0000514,1.04e-20,43;CL:0000037,4.97e-20,168;CL:0000048,2.16e-19,427;CL:0000034,3.19e-19,441;CL:0002087,4.77e-19,115;CL:0002032,6.02e-19,161;CL:0000837,6.02e-19,161;CL:0000723,6.52e-19,433;CL:0000988,1.83e-18,177;CL:0002031,6.97e-18,120;CL:0000094,8.77e-18,8;CL:0000187,4.60e-15,55;CL:0002595,2.70e-14,5;CL:0000680,5.05e-14,58;CL:0000056,5.05e-14,58;CL:0000355,5.05e-14,58;CL:0000393,4.36e-13,61;CL:0000211,4.36e-13,61;CL:0002539,1.22e-12,10;CL:0000081,1.29e-12,11;CL:0000775,4.03e-10,3;CL:0000134,1.07e-07,354;CL:0000771,1.53e-07,2;CL:0002320,2.47e-07,361;CL:0002594,7.32e-07,4;CL:0002593,8.96e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.09e-38;42!CL:0000514;5.53e-15;43!CL:0000049;1.90e-08;108!CL:0000355;1.49e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.51e-07!14;DOID:120!4.27e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.67e-25!167;UBERON:0003081!2.73e-22!216;UBERON:0002371!1.11e-21!80;UBERON:0001474!3.39e-19!86;UBERON:0002193!6.97e-18!112;UBERON:0002390!7.17e-18!102;UBERON:0003061!7.17e-18!102;UBERON:0004765!4.07e-16!101;UBERON:0001434!4.07e-16!101;UBERON:0001637!5.23e-16!42;UBERON:0003509!5.23e-16!42;UBERON:0004572!5.23e-16!42;UBERON:0002405!2.47e-14!115;UBERON:0004573!5.21e-14!33;UBERON:0004571!5.21e-14!33;UBERON:0000055!1.09e-12!69;UBERON:0001981!1.49e-12!60;UBERON:0007500!1.49e-12!60;UBERON:0004537!1.49e-12!60;UBERON:0006965!1.49e-12!60;UBERON:0004872!3.48e-10!84;UBERON:0001134!3.86e-10!61;UBERON:0002036!3.86e-10!61;UBERON:0003082!3.86e-10!61;UBERON:0004535!5.27e-10!110;UBERON:0002049!7.13e-10!79;UBERON:0007798!7.13e-10!79;UBERON:0002385!1.45e-09!63;UBERON:0001015!1.45e-09!63;UBERON:0000383!1.45e-09!63;UBERON:0001009!1.93e-09!113;UBERON:0000926!1.99e-09!448;UBERON:0004120!1.99e-09!448;UBERON:0006603!1.99e-09!448;UBERON:0004290!1.31e-08!70;UBERON:0004237!1.89e-08!10;UBERON:0004695!1.89e-08!10;UBERON:0002111!1.89e-08!10;UBERON:0004178!1.89e-08!10;UBERON:0000486!4.25e-08!82;UBERON:0003834!5.79e-08!5;UBERON:0001533!5.79e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.70e-18;33!UBERON:0004571;9.70e-18;33!UBERON:0001637;2.72e-14;42!UBERON:0003509;2.72e-14;42!UBERON:0004572;2.72e-14;42!UBERON:0003834;3.52e-14;5!UBERON:0001533;3.52e-14;5!UBERON:0004237;1.06e-12;10!UBERON:0004695;1.06e-12;10!UBERON:0002111;1.06e-12;10!UBERON:0004178;1.06e-12;10!UBERON:0003513;4.98e-10;7!UBERON:0001135;3.99e-08;15!UBERON:0007500;4.04e-07;56!UBERON:0001981;4.04e-07;56!UBERON:0004537;4.04e-07;56!UBERON:0001310;6.87e-07;4!UBERON:0002456;8.09e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.10e-36,167;UBERON:0002371,2.85e-33,76;UBERON:0003081,1.07e-32,203;UBERON:0001474,3.37e-30,82;UBERON:0002405,3.66e-29,93;UBERON:0002390,3.24e-27,98;UBERON:0003061,3.24e-27,98;UBERON:0002193,4.61e-27,108;UBERON:0004765,9.76e-27,90;UBERON:0001434,3.44e-23,100;UBERON:0001637,2.50e-21,42;UBERON:0003509,2.50e-21,42;UBERON:0004572,2.50e-21,42;UBERON:0004573,3.89e-20,33;UBERON:0004571,3.89e-20,33;UBERON:0000926,6.22e-20,315;UBERON:0004120,6.22e-20,315;UBERON:0006603,6.22e-20,315;UBERON:0003834,2.70e-14,5;UBERON:0001533,2.70e-14,5;UBERON:0000055,6.12e-14,68;UBERON:0007500,1.06e-13,59;UBERON:0001981,1.06e-13,59;UBERON:0004537,1.06e-13,59;UBERON:0006965,1.06e-13,59;UBERON:0001134,8.52e-13,62;UBERON:0002036,8.52e-13,62;UBERON:0003082,8.52e-13,62;UBERON:0004237,1.22e-12,10;UBERON:0004695,1.22e-12,10;UBERON:0002111,1.22e-12,10;UBERON:0004178,1.22e-12,10;UBERON:0002385,3.05e-12,64;UBERON:0001015,3.05e-12,64;UBERON:0000383,3.05e-12,64;UBERON:0002049,1.87e-11,78;UBERON:0007798,1.87e-11,78;UBERON:0002329,1.48e-10,71;UBERON:0003059,1.48e-10,71;UBERON:0007282,1.48e-10,71;UBERON:0004290,1.48e-10,71;UBERON:0009618,1.48e-10,71;UBERON:0004872,1.87e-10,83;UBERON:0003077,2.42e-10,72;UBERON:0007285,2.42e-10,72;UBERON:0004535,3.00e-10,109;UBERON:0007524,3.90e-10,73;UBERON:0003513,4.14e-10,7;UBERON:0001009,8.24e-10,112;UBERON:0007503,3.49e-09,78;UBERON:0000486,2.37e-08,83;UBERON:0001135,4.36e-08,15;UBERON:0001310,7.32e-07,4;UBERON:0002384,7.67e-07,371;UBERON:0002456,8.96e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,4.21886169616784,1.46062018077475,4.39139518911456,0,0,0,0,0,0,0,0,0,1.57345710739562,0.767658796194425,2.01260960310899,0,0,0,0,0,0,4.43196326825502,7.42014455639524,12.8036413722353,0,0,0,1.01778767145695,0,0.242584061187816,6.97287110717054,6.98985409637104,7.74265927237759,12.3707728698525,8.45330331546032,8.0403958162119,48.6091409838632,45.1839278508678,24.3767675869815,1.88242339542605,1.91034305040492,6.51698104890745,55.7072684115043,23.4278189765548,49.8682958123252,0,0.598390972864896,1.27867425159808,48.1747336123449,63.5471451654077,73.4930253814778,2.51248665256743,8.86520961314342,3.9093992046921,20.5835830895345,26.1477121551171,49.368132440778,0,0,0.209658645508376,0,0.750884464207532,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,2.43317435151318,0,0,0,0,0,0,0,0,0.132957960518865,0.953962497221368,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,30.3094960102945,73.6782501881818,0,0,0,0,0,0,0,1.06748995729705,0,0,0.67355336034844,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.600952235626387,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,1.15493158208859,0.925971025153221,2.09279567458058,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,4.21667878966063,0,0,0,0.144781306667579,0,0.358121926479791,0,0.197030760201927,0,0,0,0,0,0,0,14.2311334549965,29.9161459204025,14.9189584836973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.37285620900479,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,4.1822236209636,0.616067160352178,1.06461206063404,2.60979897622522,3.7064843820784,2.86249773483982,0,0,0,0,0,0.318203247925937,4.70969184119538,0,0,0.235624804691373,0.808729926293264,1.58510321173008,1.68503382495592,0,6.09283724078211,3.16950440270266,0,0,0,4.41092274836899,1.99031692572366,4.82295973779139,0,0,3.85529716229138,2.16876448669825,0,0,0,3.21003946333125,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,1.5476039091159,0,0,0,0.104909176269996,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.915360273587694,0,0,2.66139269981341,1.43367090447332,5.39763734596325,1.08684069813382,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0.909243296012797,0.322231671127465,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0.68732060563215,1.24082554265728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p6@IL8 | |||
}} |
Revision as of 01:34, 22 January 2014
Short description: | p6@IL8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IL8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -293bp_to_AJ227913_5end |
EntrezGene: | IL8 |
HGNC: | 6025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data