FFCP PHASE1:Hg19::chr4:160024207..160024239,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4388 | |||
|description=CAGE_peak_at_chr4:160024207..160024239,+ | |||
|id=chr4:160024207..160024239,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.11e-17!140;CL:0002057!8.59e-17!42;CL:0000037!6.36e-15!172;CL:0000566!6.36e-15!172;CL:0002031!2.37e-14!124;CL:0000860!1.05e-13!45;CL:0002032!5.15e-13!165;CL:0000837!5.15e-13!165;CL:0000766!1.17e-12!76;CL:0000988!7.11e-12!182;CL:0002087!1.10e-11!119;CL:0000557!4.46e-10!71;CL:0000839!6.32e-10!70;CL:0000763!3.94e-09!112;CL:0000049!3.94e-09!112;CL:0002009!5.73e-08!65;CL:0002194!2.14e-07!63;CL:0000576!2.14e-07!63;CL:0000040!2.14e-07!63;CL:0000559!2.14e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-12;33!CL:0002057;1.57e-12;33!CL:0000576;2.20e-08;48!CL:0000766;4.57e-08;69!CL:0000473;6.81e-08;39!CL:0000234;6.81e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.09e-19,136;CL:0000860,4.75e-17,42;CL:0002057,4.75e-17,42;CL:0000037,5.79e-17,168;CL:0002031,2.03e-16,120;CL:0000766,6.29e-15,72;CL:0002032,6.49e-15,161;CL:0000837,6.49e-15,161;CL:0000988,7.04e-14,177;CL:0002087,1.86e-13,115;CL:0000473,2.31e-13,48;CL:0000234,2.31e-13,48;CL:0000557,4.46e-12,67;CL:0000839,6.39e-12,66;CL:0000763,7.74e-11,108;CL:0000049,7.74e-11,108;CL:0002009,9.64e-10,61;CL:0002194,4.16e-09,59;CL:0000576,4.16e-09,59;CL:0000040,4.16e-09,59;CL:0000559,4.16e-09,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.10e-24!115;UBERON:0001049!2.32e-15!57;UBERON:0005068!2.32e-15!57;UBERON:0006241!2.32e-15!57;UBERON:0007135!2.32e-15!57;UBERON:0002780!4.31e-15!41;UBERON:0001890!4.31e-15!41;UBERON:0006240!4.31e-15!41;UBERON:0003080!8.35e-15!42;UBERON:0001893!4.25e-14!34;UBERON:0002020!5.06e-14!34;UBERON:0003528!5.06e-14!34;UBERON:0001869!8.45e-14!32;UBERON:0001017!9.71e-14!82;UBERON:0002791!1.46e-13!33;UBERON:0005743!2.51e-13!86;UBERON:0002619!1.65e-12!22;UBERON:0000956!2.23e-12!25;UBERON:0000203!2.23e-12!25;UBERON:0000073!8.54e-12!94;UBERON:0001016!8.54e-12!94;UBERON:0002616!1.90e-11!59;UBERON:0001950!2.28e-11!20;UBERON:0000955!1.29e-10!69;UBERON:0006238!1.29e-10!69;UBERON:0002390!4.61e-10!102;UBERON:0003061!4.61e-10!102;UBERON:0002346!4.22e-09!90;UBERON:0002193!6.54e-09!112;UBERON:0003075!7.23e-09!86;UBERON:0007284!7.23e-09!86;UBERON:0003056!5.94e-08!61;UBERON:0001474!2.01e-07!86;UBERON:0002371!3.49e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.43e-13;32!UBERON:0000956;5.74e-13;25!UBERON:0000203;5.74e-13;25!UBERON:0002619;5.75e-13;22!UBERON:0001893;6.96e-13;34!UBERON:0003528;8.77e-13;34!UBERON:0002020;8.77e-13;34!UBERON:0002791;1.10e-12;32!UBERON:0001950;8.67e-12;20!UBERON:0002780;1.00e-11;41!UBERON:0001890;1.00e-11;41!UBERON:0000073;9.66e-10;53!UBERON:0002616;9.66e-10;53!UBERON:0007023;3.82e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.89e-24,114;UBERON:0001049,6.39e-16,56;UBERON:0005068,6.39e-16,56;UBERON:0006241,6.39e-16,56;UBERON:0007135,6.39e-16,56;UBERON:0002780,2.55e-15,41;UBERON:0001890,2.55e-15,41;UBERON:0003080,2.55e-15,41;UBERON:0006240,2.55e-15,41;UBERON:0000073,3.83e-15,53;UBERON:0002616,3.83e-15,53;UBERON:0001893,2.61e-14,34;UBERON:0003528,3.12e-14,34;UBERON:0002020,3.12e-14,34;UBERON:0001869,5.25e-14,32;UBERON:0001017,9.67e-14,81;UBERON:0002791,1.19e-13,32;UBERON:0002619,1.08e-12,22;UBERON:0000956,1.46e-12,25;UBERON:0000203,1.46e-12,25;UBERON:0001016,7.60e-12,89;UBERON:0002390,1.08e-11,98;UBERON:0003061,1.08e-11,98;UBERON:0001950,1.56e-11,20;UBERON:0000955,1.42e-10,68;UBERON:0006238,1.42e-10,68;UBERON:0002193,3.92e-10,108;UBERON:0002346,3.73e-09,86;UBERON:0001474,6.01e-09,82;UBERON:0003075,6.37e-09,82;UBERON:0007284,6.37e-09,82;UBERON:0002371,9.78e-09,76;UBERON:0003056,4.08e-08,61;UBERON:0002405,9.59e-08,93 | |||
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| |||
|short_description=p@chr4:160024207..160024239,+ | |||
}} |
Revision as of 03:46, 22 January 2014
Short description: | p@chr4:160024207..160024239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:160024207..160024239, + |
Coexpression cluster: | C4388_Wilms_Neutrophils_Eosinophils_Mast_Reticulocytes_extraskeletal_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.09e-19 | 136 |
classical monocyte | 4.75e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.75e-17 | 42 |
hematopoietic stem cell | 5.79e-17 | 168 |
hematopoietic lineage restricted progenitor cell | 2.03e-16 | 120 |
myeloid leukocyte | 6.29e-15 | 72 |
hematopoietic oligopotent progenitor cell | 6.49e-15 | 161 |
hematopoietic multipotent progenitor cell | 6.49e-15 | 161 |
hematopoietic cell | 7.04e-14 | 177 |
nongranular leukocyte | 1.86e-13 | 115 |
defensive cell | 2.31e-13 | 48 |
phagocyte | 2.31e-13 | 48 |
granulocyte monocyte progenitor cell | 4.46e-12 | 67 |
myeloid lineage restricted progenitor cell | 6.39e-12 | 66 |
myeloid cell | 7.74e-11 | 108 |
common myeloid progenitor | 7.74e-11 | 108 |
macrophage dendritic cell progenitor | 9.64e-10 | 61 |
monopoietic cell | 4.16e-09 | 59 |
monocyte | 4.16e-09 | 59 |
monoblast | 4.16e-09 | 59 |
promonocyte | 4.16e-09 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.89e-24 | 114 |
neural tube | 6.39e-16 | 56 |
neural rod | 6.39e-16 | 56 |
future spinal cord | 6.39e-16 | 56 |
neural keel | 6.39e-16 | 56 |
regional part of forebrain | 2.55e-15 | 41 |
forebrain | 2.55e-15 | 41 |
anterior neural tube | 2.55e-15 | 41 |
future forebrain | 2.55e-15 | 41 |
regional part of nervous system | 3.83e-15 | 53 |
regional part of brain | 3.83e-15 | 53 |
telencephalon | 2.61e-14 | 34 |
brain grey matter | 3.12e-14 | 34 |
gray matter | 3.12e-14 | 34 |
cerebral hemisphere | 5.25e-14 | 32 |
central nervous system | 9.67e-14 | 81 |
regional part of telencephalon | 1.19e-13 | 32 |
regional part of cerebral cortex | 1.08e-12 | 22 |
cerebral cortex | 1.46e-12 | 25 |
pallium | 1.46e-12 | 25 |
nervous system | 7.60e-12 | 89 |
hematopoietic system | 1.08e-11 | 98 |
blood island | 1.08e-11 | 98 |
neocortex | 1.56e-11 | 20 |
brain | 1.42e-10 | 68 |
future brain | 1.42e-10 | 68 |
hemolymphoid system | 3.92e-10 | 108 |
neurectoderm | 3.73e-09 | 86 |
bone element | 6.01e-09 | 82 |
neural plate | 6.37e-09 | 82 |
presumptive neural plate | 6.37e-09 | 82 |
bone marrow | 9.78e-09 | 76 |
pre-chordal neural plate | 4.08e-08 | 61 |
immune system | 9.59e-08 | 93 |