FFCP PHASE1:Hg19::chr5:135364668..135364689,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |||
|TSSclassifier=strong | |||
|UniProt=B9ZVW9,D6RHG5 | |||
|association_with_transcript=0bp_to_ENST00000398813,ENST00000504185,ENST00000504205,ENST00000506699_5end | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_1_at_TGFBI_5end | |||
|id=chr5:135364668..135364689,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.81e-28!180;CL:0002371!1.33e-20!591;CL:0000680!1.90e-18!57;CL:0000056!1.90e-18!57;CL:0000355!1.90e-18!57;CL:0000144!8.00e-18!625;CL:0000187!8.18e-17!54;CL:0000183!1.48e-16!59;CL:0000057!1.08e-15!75;CL:0000548!1.26e-15!679;CL:0000004!1.26e-15!679;CL:0000255!1.26e-15!679;CL:0000012!3.85e-15!682;CL:0000192!1.00e-13!42;CL:0000514!1.00e-13!42;CL:0000393!2.05e-13!60;CL:0000211!2.05e-13!60;CL:0000048!4.98e-13!430;CL:0000723!2.13e-12!436;CL:0000359!5.32e-12!32;CL:0000034!3.40e-11!444;CL:0000222!1.79e-09!119;CL:0000003!5.41e-08!722;CL:0002194!1.10e-07!63;CL:0000576!1.10e-07!63;CL:0000040!1.10e-07!63;CL:0000559!1.10e-07!63;CL:0002009!1.16e-07!65;CL:0002334!2.09e-07!12;CL:0002620!3.65e-07!23;CL:0002057!6.15e-07!42;CL:0000220!7.97e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.15e-11;32!CL:0000192;1.34e-09;43!CL:0000187;1.80e-09;55!CL:0002334;2.05e-07;12!CL:0002620;3.39e-07;23!CL:0000393;4.72e-07;61!CL:0000211;4.72e-07;61!CL:0000134;6.52e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.89e-18,58;CL:0000056,4.89e-18,58;CL:0000355,4.89e-18,58;CL:0000187,2.04e-16,55;CL:0000057,2.50e-16,76;CL:0000048,1.04e-13,427;CL:0000192,2.57e-13,43;CL:0000514,2.57e-13,43;CL:0000393,4.07e-13,61;CL:0000211,4.07e-13,61;CL:0000723,4.46e-13,433;CL:0000359,5.17e-12,32;CL:0000034,7.84e-12,441;CL:0000222,3.43e-09,121;CL:0002194,4.44e-08,59;CL:0000576,4.44e-08,59;CL:0000040,4.44e-08,59;CL:0000559,4.44e-08,59;CL:0002009,4.84e-08,61;CL:0000473,6.97e-08,48;CL:0000234,6.97e-08,48;CL:0002334,2.05e-07,12;CL:0002620,3.41e-07,23;CL:0000860,6.05e-07,42;CL:0002057,6.05e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000355;9.98e-10;58!CL:0000514;1.34e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.30e-19!167;UBERON:0000486!1.29e-18!82;UBERON:0000468!1.13e-17!659;UBERON:0000926!1.36e-17!448;UBERON:0004120!1.36e-17!448;UBERON:0006603!1.36e-17!448;UBERON:0001134!2.76e-17!61;UBERON:0002036!2.76e-17!61;UBERON:0003082!2.76e-17!61;UBERON:0000914!4.34e-17!83;UBERON:0002329!4.34e-17!83;UBERON:0003077!4.34e-17!83;UBERON:0003059!4.34e-17!83;UBERON:0007282!4.34e-17!83;UBERON:0009618!4.34e-17!83;UBERON:0007285!4.34e-17!83;UBERON:0004290!6.54e-17!70;UBERON:0002385!1.85e-16!63;UBERON:0001015!1.85e-16!63;UBERON:0000383!1.85e-16!63;UBERON:0000467!1.85e-15!625;UBERON:0005256!3.04e-15!143;UBERON:0000480!4.26e-15!626;UBERON:0002100!1.54e-12!216;UBERON:0003081!7.81e-12!216;UBERON:0000490!2.09e-11!138;UBERON:0002050!4.13e-11!605;UBERON:0005423!4.13e-11!605;UBERON:0000923!4.66e-11!604;UBERON:0005291!4.66e-11!604;UBERON:0006598!4.66e-11!604;UBERON:0002532!4.66e-11!604;UBERON:0000922!1.52e-10!612;UBERON:0001637!1.95e-09!42;UBERON:0003509!1.95e-09!42;UBERON:0004572!1.95e-09!42;UBERON:0000475!2.29e-09!365;UBERON:0003914!3.42e-09!118;UBERON:0004872!1.21e-08!84;UBERON:0000479!1.89e-08!787;UBERON:0004573!2.10e-08!33;UBERON:0004571!2.10e-08!33;UBERON:0003104!3.74e-08!238;UBERON:0009142!3.74e-08!238;UBERON:0002049!3.19e-07!79;UBERON:0007798!3.19e-07!79;UBERON:0004535!4.54e-07!110;UBERON:0000062!6.17e-07!511;UBERON:0001009!9.42e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.75e-08;31!UBERON:0001015;3.75e-08;31!UBERON:0000383;3.75e-08;31!UBERON:0004573;1.54e-07;33!UBERON:0004571;1.54e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.96e-20,167;UBERON:0000926,1.74e-19,315;UBERON:0004120,1.74e-19,315;UBERON:0006603,1.74e-19,315;UBERON:0000486,2.58e-18,83;UBERON:0001134,6.41e-17,62;UBERON:0002036,6.41e-17,62;UBERON:0003082,6.41e-17,62;UBERON:0002329,1.36e-16,71;UBERON:0003059,1.36e-16,71;UBERON:0007282,1.36e-16,71;UBERON:0004290,1.36e-16,71;UBERON:0009618,1.36e-16,71;UBERON:0002385,4.05e-16,64;UBERON:0001015,4.05e-16,64;UBERON:0000383,4.05e-16,64;UBERON:0007524,4.25e-16,73;UBERON:0003077,5.05e-16,72;UBERON:0007285,5.05e-16,72;UBERON:0007503,9.06e-16,78;UBERON:0005256,2.58e-14,122;UBERON:0003104,2.96e-13,160;UBERON:0009142,2.96e-13,160;UBERON:0002100,3.69e-12,199;UBERON:0002050,4.69e-12,564;UBERON:0003081,6.72e-12,203;UBERON:0005423,1.43e-11,581;UBERON:0000490,1.43e-11,148;UBERON:0000923,2.47e-11,560;UBERON:0010316,2.47e-11,560;UBERON:0005291,2.47e-11,560;UBERON:0006598,2.47e-11,560;UBERON:0010317,2.47e-11,560;UBERON:0002532,2.47e-11,560;UBERON:0000922,5.92e-11,592;UBERON:0001637,1.91e-09,42;UBERON:0003509,1.91e-09,42;UBERON:0004572,1.91e-09,42;UBERON:0003914,2.44e-09,117;UBERON:0004573,2.06e-08,33;UBERON:0004571,2.06e-08,33;UBERON:0004872,2.94e-08,83;UBERON:0000479,3.06e-08,773;UBERON:0002049,7.57e-07,78;UBERON:0007798,7.57e-07,78;UBERON:0004535,9.03e-07,109 | |||
|phase1_expression=4869.34392120946,4665.8927171562,4080.77095298246,2153.57738055937,4655.0997984602,2841.2065729949,1380.48433601729,1059.3942277368,51.714754383568,2129.03882584907,1221.15204395175,5396.59409847591,4520.70223985747,380.210236293263,799.330470255733,4374.8197279617,4909.54962528332,4847.79837999138,4518.25771680009,8470.2363114507,5107.76930737361,4645.08551758378,386.418582626927,1049.14246818366,610.89048426831,2.8272960126742,1.47781061009902,1.33808328233255,420.899776228327,291.710342553882,618.180780401092,467.065982035295,1098.79919170306,430.393667834141,0,0,7.34001098337118,578.925201915812,730.182333238786,393.223697737123,340.351520844685,201.461860263805,287.711909047386,1461.54309621218,1578.76569273185,1690.56832241789,1172.37206215227,1180.87417439868,1257.71757220502,1687.31588096941,1813.87396293256,1257.84898077738,829.802853533041,782.327436503597,702.863465424634,1638.27308103929,2005.31439062505,1394.6339444662,1401.86422705873,1163.36772315084,1211.54385338918,2093.2363509849,2139.247727992,2287.54823610897,708.110542253745,653.627778844193,556.803090602044,1641.4075301223,1429.38467938977,1169.34473989235,690.15543300204,538.790181449807,411.717566060591,397.371193552763,329.324060645852,411.350262487433,767.092222099415,557.606803120513,685.012450502956,280.167527097647,286.837848521088,326.420842777401,0,7.09980194640771,1.77901850772711,24.7503529088574,2.40237592221607,3.4485146397269,7.27149360063348,1.90810750907073,2.27685187643779,15.2681669236444,5.3518251937532,2.64342657158052,49.3247535423752,35.0300832750852,1.96709770113833,6.6811829667358,17.8873304129573,0,0.651844533267181,0.473447805734733,0,0,1.76763544484902,2.43687284041983,1.62482318259009,0.25618263945135,0.260118695119756,0.164437904603676,1.65810010671509,1.44901542867526,0.741432815810302,3.47803076516627,1.04535523804977,0.453237370790265,2.68254345521345,6.52892146416997,7.33757106856558,13.6983128159362,9.11516835398986,4.75226022224187,34.48170226881,25.4693356197293,41.2271397622741,39.0682465872628,13.9591759476578,1.41124720257313,6.68600489458768,1.44824403882799,192.60742438803,2270.32241009681,1000.52454642562,4852.3206207628,7001.1839220302,8260.16243677889,4553.01204686754,12511.8691503511,1878.78495631868,3939.24447531991,2820.0236294635,58.0237304454867,732.597824756302,804.602240842212,2550.2934193385,2697.44376050295,2707.55590800617,1009.53081268451,890.596076084659,1054.56784627463,2.78267370313387,51.6140757063675,10.7613555498354,23.7429335608084,148.502800418307,127.104535376311,136.891703081611,6.20200222006389,28.8170672776235,32.1331788254083,106.346939716815,21.2876189601184,70.7779966889692,44.4872327218501,780.166695810135,22.7714307124403,28.9642890687759,19.4817861236147,9.19899824795299,13.2897192339538,58.2581545698695,3.9534125230819,3.87780264148325,995.166626989263,7366.11826802801,2001.64849788201,1554.74860110882,7224.84080342112,1467.6177655368,2010.58987411031,3793.85930823372,6526.57666356963,831.244675552776,427.975805165399,594.020555914309,1789.65022447367,1950.93168028928,396.706184094618,1199.31901518209,260.135150624269,353.44612950501,207.859062599464,338.961945506867,321.351445734745,230.898367689284,102.566654955326,465.689295759175,458.569102910873,946.785072207594,5403.62800582606,3681.48074052459,35.1822478163998,116.235104961055,155.987097017595,1038.18207338318,1041.13904232927,2946.01809709946,550.940113608222,12249.9800522853,5344.91432735111,3735.7236217396,16876.8231526907,4390.8621657914,11960.1891499982,5475.37179641904,17871.0507156987,10641.4850816751,13065.9721548754,4477.03092026551,1822.23599851847,32323.6233986377,8618.33448239235,1715.10539122058,1166.52250969366,912.063027255751,508.791352220093,8.41618572294208,6.22889911110981,34.0448252607689,42.1900493912558,29.7738604033242,10.5843434131991,547.573363154356,581.489808126368,613.319050805014,233.112699872053,73.6317071302977,128.244571243191,132.170397021232,130.14595613708,136.874820160901,139.44284421914,132.634276083103,140.629054411051,125.189294749971,119.656365810327,16.9775754563669,800.780528417676,3048.11712792035,5143.83481138011,121.684833428958,171.011935701907,85.0737465621222,0,52.7620401349957,2986.30930605614,987.75256867763,285.500453274354,53.380884350576,106.291535041992,127.716855681647,730.034219266264,2095.69108620697,439.376234855541,2341.48158914499,77.2360495521745,60.651102147536,22.259735811448,20.5453143469412,17.1697232418975,1753.06508334227,405.763395751438,1960.7422929129,848.291197580332,5471.51387969325,936.708067480447,88.1255863396027,122.356888114378,361.529866452794,0,0,8.70778085271243,4.61183850934277,4.03975786964416,3.61937997465364,1.52795370223311,0,331.880545284048,18.8174311647082,133.051974624855,0.857479297891735,318.56441062517,4185.65262086832,450.297074940633,2026.20487278741,4334.79612372482,4061.67972603158,387.205897747571,211.135096930073,466.059762163001,143.267623343511,459.311836623755,3695.40922408848,5787.059421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| |||
|short_description=p1@TGFBI | |||
}} |
Revision as of 07:33, 22 January 2014
Short description: | p1@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000398813, ENST00000504185, ENST00000504205, ENST00000506699_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | B9ZVW9D6RHG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.89e-18 | 58 |
myoblast | 4.89e-18 | 58 |
multi-potent skeletal muscle stem cell | 4.89e-18 | 58 |
muscle cell | 2.04e-16 | 55 |
fibroblast | 2.50e-16 | 76 |
multi fate stem cell | 1.04e-13 | 427 |
smooth muscle cell | 2.57e-13 | 43 |
smooth muscle myoblast | 2.57e-13 | 43 |
electrically responsive cell | 4.07e-13 | 61 |
electrically active cell | 4.07e-13 | 61 |
somatic stem cell | 4.46e-13 | 433 |
vascular associated smooth muscle cell | 5.17e-12 | 32 |
stem cell | 7.84e-12 | 441 |
mesodermal cell | 3.43e-09 | 121 |
monopoietic cell | 4.44e-08 | 59 |
monocyte | 4.44e-08 | 59 |
monoblast | 4.44e-08 | 59 |
promonocyte | 4.44e-08 | 59 |
macrophage dendritic cell progenitor | 4.84e-08 | 61 |
defensive cell | 6.97e-08 | 48 |
phagocyte | 6.97e-08 | 48 |
preadipocyte | 2.05e-07 | 12 |
skin fibroblast | 3.41e-07 | 23 |
classical monocyte | 6.05e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.05e-07 | 42 |