FFCP PHASE1:Hg19::chr5:135382052..135382068,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11771 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=28bp_to_uc011cyb.1_5end | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_2_at_TGFBI_5end | |||
|id=chr5:135382052..135382068,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-29!180;CL:0002371!1.70e-23!591;CL:0000144!5.93e-21!625;CL:0000680!3.27e-19!57;CL:0000056!3.27e-19!57;CL:0000355!3.27e-19!57;CL:0000548!9.55e-19!679;CL:0000004!9.55e-19!679;CL:0000255!9.55e-19!679;CL:0000012!8.63e-18!682;CL:0000187!1.81e-17!54;CL:0000183!2.08e-17!59;CL:0000057!7.49e-17!75;CL:0000192!1.40e-14!42;CL:0000514!1.40e-14!42;CL:0000393!4.23e-13!60;CL:0000211!4.23e-13!60;CL:0000359!1.04e-12!32;CL:0000048!1.25e-12!430;CL:0000723!2.19e-12!436;CL:0000034!4.46e-11!444;CL:0000003!3.75e-10!722;CL:0000222!7.63e-09!119;CL:0000220!6.47e-08!246;CL:0002620!7.89e-08!23;CL:0002334!1.14e-07!12;CL:0002321!1.45e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.08e-13;32!CL:0000192;2.60e-10;43!CL:0000187;5.05e-10;55!CL:0002620;2.81e-08;23!CL:0002334;5.10e-08;12!CL:0000393;2.15e-07;61!CL:0000211;2.15e-07;61!CL:0000057;3.43e-07;73!CL:0000134;8.92e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.41e-19,58;CL:0000056,2.41e-19,58;CL:0000355,2.41e-19,58;CL:0000057,7.44e-18,76;CL:0000187,1.56e-17,55;CL:0000048,2.09e-16,427;CL:0000723,4.27e-16,433;CL:0000192,1.85e-14,43;CL:0000514,1.85e-14,43;CL:0000034,3.46e-14,441;CL:0000359,2.51e-13,32;CL:0000393,2.56e-13,61;CL:0000211,2.56e-13,61;CL:0002620,2.67e-08,23;CL:0002334,5.22e-08,12;CL:0000222,5.80e-08,121;CL:0002320,1.24e-07,361;CL:0000134,7.84e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000355;1.92e-10;58!CL:0000514;2.60e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!5.03e-19!82;UBERON:0004290!1.72e-17!70;UBERON:0001134!2.16e-17!61;UBERON:0002036!2.16e-17!61;UBERON:0003082!2.16e-17!61;UBERON:0000914!3.27e-17!83;UBERON:0002329!3.27e-17!83;UBERON:0003077!3.27e-17!83;UBERON:0003059!3.27e-17!83;UBERON:0007282!3.27e-17!83;UBERON:0009618!3.27e-17!83;UBERON:0007285!3.27e-17!83;UBERON:0002204!6.28e-17!167;UBERON:0000926!7.80e-17!448;UBERON:0004120!7.80e-17!448;UBERON:0006603!7.80e-17!448;UBERON:0002385!1.83e-16!63;UBERON:0001015!1.83e-16!63;UBERON:0000383!1.83e-16!63;UBERON:0000468!2.28e-15!659;UBERON:0005256!3.75e-15!143;UBERON:0000467!4.81e-13!625;UBERON:0000480!8.79e-13!626;UBERON:0002100!7.50e-12!216;UBERON:0000490!4.50e-11!138;UBERON:0003081!3.16e-10!216;UBERON:0001637!7.37e-10!42;UBERON:0003509!7.37e-10!42;UBERON:0004572!7.37e-10!42;UBERON:0002050!1.44e-09!605;UBERON:0005423!1.44e-09!605;UBERON:0000923!1.55e-09!604;UBERON:0005291!1.55e-09!604;UBERON:0006598!1.55e-09!604;UBERON:0002532!1.55e-09!604;UBERON:0000475!2.71e-09!365;UBERON:0000922!3.67e-09!612;UBERON:0003914!8.95e-09!118;UBERON:0004573!1.62e-08!33;UBERON:0004571!1.62e-08!33;UBERON:0003104!2.02e-08!238;UBERON:0009142!2.02e-08!238;UBERON:0004872!2.10e-08!84;UBERON:0000479!5.10e-08!787;UBERON:0002199!1.99e-07!45;UBERON:0002416!1.99e-07!45;UBERON:0003102!4.77e-07!95;UBERON:0004535!7.35e-07!110;UBERON:0002097!9.05e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.40e-07;33!UBERON:0004571;1.40e-07;33!UBERON:0002385;2.10e-07;31!UBERON:0001015;2.10e-07;31!UBERON:0000383;2.10e-07;31!UBERON:0001637;9.70e-07;42!UBERON:0003509;9.70e-07;42!UBERON:0004572;9.70e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,3.96e-19,83;UBERON:0002204,1.52e-17,167;UBERON:0002329,1.65e-17,71;UBERON:0003059,1.65e-17,71;UBERON:0007282,1.65e-17,71;UBERON:0004290,1.65e-17,71;UBERON:0009618,1.65e-17,71;UBERON:0001134,2.46e-17,62;UBERON:0002036,2.46e-17,62;UBERON:0003082,2.46e-17,62;UBERON:0000926,3.28e-17,315;UBERON:0004120,3.28e-17,315;UBERON:0006603,3.28e-17,315;UBERON:0007503,6.14e-17,78;UBERON:0007524,6.62e-17,73;UBERON:0003077,7.61e-17,72;UBERON:0007285,7.61e-17,72;UBERON:0002385,6.33e-16,64;UBERON:0001015,6.33e-16,64;UBERON:0000383,6.33e-16,64;UBERON:0005256,2.57e-14,122;UBERON:0003104,3.80e-13,160;UBERON:0009142,3.80e-13,160;UBERON:0002100,5.17e-12,199;UBERON:0003081,4.05e-10,203;UBERON:0000490,4.30e-10,148;UBERON:0001637,1.30e-09,42;UBERON:0003509,1.30e-09,42;UBERON:0004572,1.30e-09,42;UBERON:0002050,6.17e-09,564;UBERON:0005423,1.11e-08,581;UBERON:0000479,1.37e-08,773;UBERON:0000923,1.99e-08,560;UBERON:0010316,1.99e-08,560;UBERON:0005291,1.99e-08,560;UBERON:0006598,1.99e-08,560;UBERON:0010317,1.99e-08,560;UBERON:0002532,1.99e-08,560;UBERON:0004573,2.10e-08,33;UBERON:0004571,2.10e-08,33;UBERON:0003914,4.33e-08,117;UBERON:0002384,9.44e-08,371;UBERON:0004872,1.24e-07,83;UBERON:0002199,1.52e-07,46;UBERON:0002416,1.52e-07,46;UBERON:0000922,2.64e-07,592;UBERON:0002097,4.78e-07,41 | |||
|phase1_expression=43.7844894042041,57.1648398788925,39.8900963591598,16.0117277365009,44.2491483483015,29.6595098194125,5.06599756336621,12.0026775951098,0.522371256399677,19.1672470471177,11.1648186875588,63.5664392898801,41.4114155818672,6.06455129504228,5.96515276310248,55.8029871554973,57.2559801622778,60.615737502152,51.2329438730032,66.731613477619,47.9401624423995,47.9585723861474,4.29353980696585,10.2655818804663,5.64941878176613,0.152826811495903,0.0821005894499457,0,3.54027849164014,2.68680578668049,5.88301268601089,4.59710612239464,15.0602959389125,7.39508020333575,0,0,0,1.66198622559563,4.21143339687298,3.25516306073778,3.80656306207871,1.6194683300949,0.77272670290256,8.86929256555345,6.80176698639857,8.00527401919793,8.59987436551033,7.40102198439286,6.50383378879718,10.6446185159196,7.68482119587302,5.43909128743746,4.13694816883942,1.93645405075148,2.70852973188684,8.65914761895982,15.5556505532972,6.96642801779762,11.0190201253525,5.45579346029359,10.8687311385837,7.91643120448119,9.77371922345996,12.7867425159808,4.64334781805734,3.97169657283798,2.4912889959823,10.5524439407832,9.90817544998383,5.86409880703815,5.44859552370032,3.68277635987565,2.21523671208619,2.32380814943136,4.03948169933583,2.93522103711726,6.06574608191074,4.8056605709282,3.69668849403284,1.14005097496499,1.9891667719909,2.92262646023414,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,2.43806866313962,26.8280343881454,9.20610445273418,53.8544337053004,66.1766042039374,79.2310458715706,16.7010048880731,125.55179653808,26.0916095372827,41.685126722962,31.5326880638322,0.654895377488563,5.82872461268068,8.89882662682631,16.5519170763889,24.7264226964959,27.7882137484428,9.77811559651902,1.14398982156026,2.60020250930695,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,1.10047216776027,2.08994966536811,0,0.35576626268671,0,0.805658634218294,0,1.46437234528902,0,4.86085168729056,0.625098097988558,0,0.112611480483322,0,0,0.549605231791222,0,0,9.59406914713576,66.5942415271727,24.5663192629285,12.711281358069,84.9036397416489,16.3147455811244,17.3810056044115,58.7119476513377,75.4802698156509,5.60179863719579,4.84958419450877,6.53847612453835,12.2599516392394,19.01380550784,3.51482147750695,12.1742429963825,2.85235910772225,5.23070381931304,2.70099346880659,2.75184005425824,2.52811452064047,2.85815839756851,1.22834317311768,3.51307655997603,2.37600571456411,7.91254173691382,10.9219363432563,34.4936708071794,0.336672227908132,0.875829639103749,1.10825646193673,5.70670907145089,11.0335606487647,19.0802334811378,6.23877007380116,164.679685562375,57.0198228145575,42.5983121330719,199.560578896128,47.4041634496819,125.470943002221,53.2294209108347,141.097013753699,105.329402579256,143.382383770657,48.1420969899226,20.6906952728079,430.271626130137,98.1325436737216,18.6516651541536,11.5956511897978,5.45492241181669,4.01526433544605,0.243947412259191,0,0.69716365721711,0.829288440122964,0.756962552626885,0.36497735907583,7.8224766164908,3.85944562915731,9.66944449467364,1.39310378409594,1.44375896333917,1.8929088006375,1.34867752062481,2.6511213287183,2.31617342738027,1.30727666455444,1.66089433377768,1.61797569792197,1.56977172100277,0.769494313892781,0,1.40241773803446,27.1638847478724,57.3333974403614,3.80265104465493,0.982827216677626,0,0,0.737930631258681,30.024366802242,13.0602839636264,6.74410519545717,0.502644862058154,2.12953423864618,1.3032332212413,4.15973914111831,33.1962086658129,3.70977295920246,15.3805389448926,1.29929802984966,0,0,0.790204397959275,0,13.7881523408942,2.80805118167085,17.8357394746474,1.87467667973554,58.625762741402,10.0660319042094,1.07470227243418,2.61570544662566,5.75074018747817,0,0,0.207328115540772,0,0,0,0.381988425558278,0,5.13217338068116,0.514137463516618,1.20137223137567,0,4.14885012077835,29.645284680663,4.5469737208989,19.6493007951822,42.9187735022259,43.110440380356,6.11657668145202,0,6.68739173081569,1.41849132023278,3.99633268524149,43.1793540847606,64.5719710415817,18.9345277459577,27.3618394806737,35.183802925512,31.6780749173372,3.01439377059586,3.48613383440118,6.59821741801577,9.72990245129524,12.5564272858032,14.7583757638122,21.805861849734,20.6751484501405,1.42636905040718,45.4613302936199,66.985281151425,92.574517995026,0,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0,0.837581326671744,0,0,0,0,23.5567664100749,26.5090376161629,1.08506009479894,27.8680954451282,14.4527480925701,3.31175071571263,6.2084949946138,10.8340595901979,0,17.5904221197258,33.2112799267718,28.3928519554223,3.99664626553181,11.1606659753762,7.89229874764969,3.3082884179662,3.23571301227925,2.881644060693,6.66880657181771,16.6435439510497,45.358543999452,82.6199000036527,79.4933021632163,108.334796451166,135.699359061787,40.9365799253363,75.9230507797827,32.651974617898,28.0661642720833,26.2791353463428,18.4786101031071,50.8869340599949,20.4530266089528,0.966875596732978,19.8501405600252,0.920809889358963,26.6369519741888,16.5702962886112,31.6009840052212,0.902399225814824,5.16002758599579,3.92174884588428,8.76835347919564,14.8827796738955,1.13733384070897,1.02056223165909,3.02282282542995,1.54227252690289,3.52230368807009,5.51858751240339,1.27438136522519,0.831076008928724,8.2833659247206,0,0,0.256450125116389,6.23227826829441,6.50756789328606,1.95777922130672,0.183138929636687,0,15.5051695258967,5.85054221432869,28.9231073719487,9.76374254750432,24.8018273554577,29.4727055474169,8.54586749404089,57.1475702699216,21.4624706993058,20.1987106976159,37.6605510785699,19.5036200125954,11.7235941092715,4.21121951232128,4.4509423576442,8.36721988735114,194.239217994505,11.1525963225696,20.6382498717979,20.2276291520468,21.7483248018768,68.9406095066582,21.8981076715247,7.44316738719335,5.37845022021834,7.05331717518152,1.535386747868,0.42793898803392,32.1385280405196,30.61299696777,9.89298516708231,35.6898138656871,22.9734184574089,23.8575328256513,3.17020642346017,46.7596886425269,25.3569544326587,16.0850903156648,49.6555689756751,7.23449530462324,41.856007858299,27.1219479888583,78.2938787835496,43.1235333906793,31.5684637382709,17.3632660280006,5.9030527684197,35.1034952145478,33.1511142966733,40.845862367175,5.0193973271418,2.45622602532803,42.4438551262688,3.54761064070598,111.253723801869,32.9294892959902,3.41525856389144,5.59895552391973,6.83177000351136,9.38423185750102,9.80018863751903,1.69458841398202,27.9828492236299,15.1624328100863,30.1532504404939,36.0665738324926,1.52234282769651,1.52927441428475,1.13929437434833,1.19115887728894,2.05681136543097,1.94541993357815,0,1.58625035258854,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,1.22896305723383,1.56573275524691,1.33479313369527,0,0,0,0,0,0,0,2.19762268907841,0,0,6.5351313765475,0.47748896947538,6.53322297831805,0.614321404198464,0,0.140669416410513,3.7844959707788,0,0,3.38721580026819,0,0,5.62477753761851,0,28.6156420648863,4.49341755736634,0,0,1.67693789582787,7.18449277040819,1.11136990144637,0,0.371072392647405,1.99613798001194,0,0,0,3.41380344856499,8.89887776024682,0,0,0,1.38899995946634,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,1.25481369850743,0.692552326534174,0.341826167541004,0,0,0.217294743844016,1.5950057986596,1.55715908783166,3.19820865611181,0,0,0,0,0,0,0,0,8.86191871017714,1.14262965711403,1.27217764290547,0,0,0.707660516026713,2.4441205797345,0,0,0,0.337005664903385,1.60515529459758,0,0,1.9566461893209,0.242780379534093,0.789168805698781,1.20990716048664,0.30607276163049,10.0466661609296,0,0,0.664653872707185,1.65495977937749,0.313932918407225,0,0,0.138674673013139,0.694238953340524,2.25382514053069,5.13649318824375,3.31980669659857,0,0.677294319023596,0.146178634172371,0.0821154570532092,1.06687918137261,0,4.51961481561065,0.137041924646751,22.8521803458438,0,0,18.5968462983558,2.98834192635094,1.59847687665704,0,0,0,0.288109595976299,0,0.235694034616795,0,0,13.1577700750855,24.5608001416291,0,0,0,1.28929632425987,0,0.558564802544508,1.14580212005842,0,0.199679000498991,0.858452096273142,0.446342914883745,1.14211903227435,50.0816838123941,0,5.59360594381288,6.18118937858748,5.05526578906387,0.0984274815147488,0,0,0.408610218334727,0,0,0,1.799791132412,2.32140586367385,0,3.35434687599266,0.709251365692784,1.99327434912993,2.85120908602398,49.3040183165323,1.15149118391667,5.00286728461357,1.98627591109629,0,7.60199442455198,39.7541885952583,57.1527880191466,10.7757172406239,0,29.1363517253071,2.15292973888239,1.46552233678082,5.30027555648885,0.258565912723101,0,5.47477881229854,0,1.49502377594773,1.41483874589699,2.07119527673598,2.48083010905975,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.554645257684261,0.496771223531068,0,3.12451019905266,0,3.14011866899464,2.82318983637806,0,0,40.1495419765691,57.25976091257,13.3153406760627,8.90194124792919,17.6097531226803,23.1350917615099,24.7147273868677,4.68815863666041,59.6878850237877,12.5676877491189,18.0005346894984,8.09645601894488,24.8420731002015,19.4911917685202,34.5594228925393,21.9132925960928,63.1081957788317,28.5603909126597,18.3091829942098,20.3670498306867,36.3047682803611,19.4894179148967,18.710506768835,38.4026654076627,87.2225091164294,73.4113885509704,0,7.51217338588483,0,1.04397716786085,3.62729480819636,14.8174383567254,5.62894420364875,18.0879729492302,3.39681591877069,3.28926074368061,4.06385035675526,3.27953865060555,13.6843376928989,1.53744911152768,0.690860683462397,6.98877899207979,0,0,0.132864840313363,0,6.87980682577466,2.45772908753719,0,0,0,0,0,1.28874165176289,0.839277046316667,5.59869534029676,0,0,0,0,0,0,0,0,35.9344916238363,0,0,5.29013915536026,24.8058836656092,0.192687675289379,0,0.159633859057151,0,0,0,0,0,5.79071539156051,0,9.90514432017067,15.711490596446,0,0.690359926060101,0.198916222116275,1.27857558193737,20.3722119390555,0,0,5.73201711285339,14.7856086217045,0,0,0,0,0,0,3.96968942711435,0,9.07113236241126,1.07140367175657,0.672567444437648,0,0,3.28198769601764,0,29.8389136421108,0.135939465953663,0,2.48207065856333,0,1.56986185701028,0,2.5224494698241,4.56579360254748,41.0262423315381,6.21077194253165,1.1436247068265,0,0,0.521574816907738,3.20684545892101,1.03608082081518,0.3414369541879,0.691259661814092,0.860454717640555,3.31329602045583,3.49374959512547,0,0.4582137370881,1.5510319283216,11.4664672677292,0,0,0,0,0.615976841137482,2.3196288626764,3.88568794447312,0,0,0,3.84016678932464,0,0,0.617393264863557,3.27839340755936,11.7579324090381,0.245148321753905,0.235676547101626,0.392616934229891,0,0,45.8803209657106,2.16163011353663,3.0939786227317,0,3.39252483350749,1.41157948686277,0.160482733378337,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,68.4470833426822,36.9740502905135,58.8372124488353,0.252332849670158,0.437062287854782,0,0,0,0,0,1.13668047327359,0.535928260312357,0,0.103432995861895,1.49263787330687,0.714193294391221,0.322944549180031,0.744896571550295,9.41907645677153,0.381882949668989,0.808468755832877,1.95945073107265,7.1868993227909,0.606168477131288,1.57788851863888,4.65724499164419,3.09332420721703,0.106727345877715,1.9307228228694,1.3473780315988,7.03922827210363,1.34465588601153,2.03448089157869,0.665756774185513,2.61655931668334,0 | |||
|short_description=p2@TGFBI | |||
}} |
Revision as of 07:34, 22 January 2014
Short description: | p2@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | 28bp_to_uc011cyb.1_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.41e-19 | 58 |
myoblast | 2.41e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.41e-19 | 58 |
fibroblast | 7.44e-18 | 76 |
muscle cell | 1.56e-17 | 55 |
multi fate stem cell | 2.09e-16 | 427 |
somatic stem cell | 4.27e-16 | 433 |
smooth muscle cell | 1.85e-14 | 43 |
smooth muscle myoblast | 1.85e-14 | 43 |
stem cell | 3.46e-14 | 441 |
vascular associated smooth muscle cell | 2.51e-13 | 32 |
electrically responsive cell | 2.56e-13 | 61 |
electrically active cell | 2.56e-13 | 61 |
skin fibroblast | 2.67e-08 | 23 |
preadipocyte | 5.22e-08 | 12 |
mesodermal cell | 5.80e-08 | 121 |
connective tissue cell | 1.24e-07 | 361 |
mesenchymal cell | 7.84e-07 | 354 |