FFCP PHASE1:Hg19::chr5:150020342..150020353,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30672 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=102bp_to_ENST00000519664_5end | |||
|description=CAGE_peak_11_at_SYNPO_5end | |||
|id=chr5:150020342..150020353,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.29e-16!119;CL:0000359!1.08e-14!32;CL:0000192!2.12e-12!42;CL:0000514!2.12e-12!42;CL:0000220!2.16e-11!246;CL:0002321!5.98e-11!248;CL:0000187!7.37e-11!54;CL:0000183!1.22e-10!59;CL:0000680!2.06e-10!57;CL:0000056!2.06e-10!57;CL:0000355!2.06e-10!57;CL:0000055!5.01e-10!180;CL:0000393!4.02e-08!60;CL:0000211!4.02e-08!60;CL:0000213!1.82e-07!57;CL:0000215!1.82e-07!57;CL:0000076!6.76e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.39e-18;32!CL:0000192;8.83e-11;43!CL:0002539;2.45e-08;10!CL:0002595;2.70e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.14e-19,32;CL:0000192,6.31e-15,43;CL:0000514,6.31e-15,43;CL:0000222,9.03e-12,121;CL:0000187,6.50e-11,55;CL:0000680,5.94e-10,58;CL:0000056,5.94e-10,58;CL:0000355,5.94e-10,58;CL:0000393,4.27e-09,61;CL:0000211,4.27e-09,61;CL:0002595,1.87e-08,5;CL:0002539,3.29e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;8.83e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!3.13e-23!286;UBERON:0002049!9.35e-23!79;UBERON:0007798!9.35e-23!79;UBERON:0000055!1.94e-22!69;UBERON:0004111!9.79e-22!241;UBERON:0004872!1.13e-20!84;UBERON:0001981!8.20e-20!60;UBERON:0007500!8.20e-20!60;UBERON:0004537!8.20e-20!60;UBERON:0006965!8.20e-20!60;UBERON:0001009!4.28e-18!113;UBERON:0000025!5.73e-18!194;UBERON:0001637!8.52e-18!42;UBERON:0003509!8.52e-18!42;UBERON:0004572!8.52e-18!42;UBERON:0000483!3.45e-17!309;UBERON:0000119!5.11e-17!312;UBERON:0004535!7.32e-17!110;UBERON:0000481!2.80e-15!347;UBERON:0000475!1.19e-14!365;UBERON:0003914!3.27e-14!118;UBERON:0004573!3.10e-13!33;UBERON:0004571!3.10e-13!33;UBERON:0000490!1.81e-10!138;UBERON:0000467!7.36e-10!625;UBERON:0000480!1.07e-09!626;UBERON:0001134!1.98e-09!61;UBERON:0002036!1.98e-09!61;UBERON:0003082!1.98e-09!61;UBERON:0002385!3.26e-09!63;UBERON:0001015!3.26e-09!63;UBERON:0000383!3.26e-09!63;UBERON:0000468!4.18e-09!659;UBERON:0003075!5.02e-09!86;UBERON:0007284!5.02e-09!86;UBERON:0007100!5.50e-09!27;UBERON:0000033!1.05e-08!123;UBERON:0002346!5.13e-08!90;UBERON:0000153!5.95e-08!129;UBERON:0007811!5.95e-08!129;UBERON:0000914!6.41e-08!83;UBERON:0002329!6.41e-08!83;UBERON:0003077!6.41e-08!83;UBERON:0003059!6.41e-08!83;UBERON:0007282!6.41e-08!83;UBERON:0009618!6.41e-08!83;UBERON:0007285!6.41e-08!83;UBERON:0000486!6.60e-08!82;UBERON:0000948!1.15e-07!24;UBERON:0005498!1.15e-07!24;UBERON:0004140!1.15e-07!24;UBERON:0009881!1.15e-07!24;UBERON:0004141!1.15e-07!24;UBERON:0003084!1.15e-07!24;UBERON:0007005!1.15e-07!24;UBERON:0004139!1.15e-07!24;UBERON:0004291!1.15e-07!24;UBERON:0001869!1.31e-07!32;UBERON:0003056!1.62e-07!61;UBERON:0001893!1.87e-07!34;UBERON:0002780!2.94e-07!41;UBERON:0001890!2.94e-07!41;UBERON:0006240!2.94e-07!41;UBERON:0004290!4.22e-07!70;UBERON:0002791!5.58e-07!33;UBERON:0003080!8.08e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.39e-17;42!UBERON:0003509;2.39e-17;42!UBERON:0004572;2.39e-17;42!UBERON:0004573;2.99e-14;33!UBERON:0004571;2.99e-14;33!UBERON:0000055;1.20e-10;65!UBERON:0007500;2.62e-10;56!UBERON:0001981;2.62e-10;56!UBERON:0004537;2.62e-10;56!UBERON:0002619;2.57e-09;22!UBERON:0001950;7.12e-09;20!UBERON:0002049;9.47e-09;75!UBERON:0007798;9.47e-09;75!UBERON:0001869;1.04e-08;32!UBERON:0000200;1.28e-08;6!UBERON:0004237;2.45e-08;10!UBERON:0004695;2.45e-08;10!UBERON:0002111;2.45e-08;10!UBERON:0004178;2.45e-08;10!UBERON:0003834;2.70e-08;5!UBERON:0001533;2.70e-08;5!UBERON:0007100;3.21e-08;25!UBERON:0001893;3.36e-08;34!UBERON:0002791;6.02e-08;32!UBERON:0000956;8.54e-08;25!UBERON:0000203;8.54e-08;25!UBERON:0003528;3.09e-07;34!UBERON:0002020;3.09e-07;34!UBERON:0000948;6.58e-07;22!UBERON:0003914;8.75e-07;74!UBERON:0000947;9.27e-07;21!UBERON:0010191;9.27e-07;21 | |||
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| |||
|short_description=p11@SYNPO | |||
}} |
Revision as of 08:22, 22 January 2014
Short description: | p11@SYNPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SYNPO_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_ENST00000519664_5end |
EntrezGene: | SYNPO |
HGNC: | 30672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.14e-19 | 32 |
smooth muscle cell | 6.31e-15 | 43 |
smooth muscle myoblast | 6.31e-15 | 43 |
mesodermal cell | 9.03e-12 | 121 |
muscle cell | 6.50e-11 | 55 |
muscle precursor cell | 5.94e-10 | 58 |
myoblast | 5.94e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.94e-10 | 58 |
electrically responsive cell | 4.27e-09 | 61 |
electrically active cell | 4.27e-09 | 61 |
smooth muscle cell of the subclavian artery | 1.87e-08 | 5 |
aortic smooth muscle cell | 3.29e-08 | 10 |