FFCP PHASE1:Hg19::chr5:156693159..156693213,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13760 | |||
|TSSclassifier=strong | |||
|UniProt=E7EVF4,E5RFQ0,Q96F07 | |||
|association_with_transcript=0bp_to_ENST00000347377,ENST00000520419,NM_001037332,uc003lwr.2_5end | |||
|description=CAGE_peak_2_at_CYFIP2_5end | |||
|id=chr5:156693159..156693213,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.94e-27!53;CL:0000051!2.94e-27!53;CL:0000838!1.10e-26!52;CL:0000738!8.88e-25!140;CL:0000988!6.41e-20!182;CL:0000037!1.04e-19!172;CL:0000566!1.04e-19!172;CL:0002087!1.05e-19!119;CL:0002032!3.46e-17!165;CL:0000837!3.46e-17!165;CL:0002031!2.94e-16!124;CL:0000084!4.09e-13!25;CL:0000827!4.09e-13!25;CL:0000945!7.75e-13!24;CL:0000826!7.75e-13!24;CL:0000791!1.55e-11!18;CL:0000789!1.55e-11!18;CL:0002420!1.55e-11!18;CL:0002419!1.55e-11!18;CL:0000790!1.55e-11!18;CL:0000236!1.77e-09!14;CL:0000625!1.68e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.96e-17;53!CL:0000084;3.62e-14;25!CL:0000945;7.66e-14;24!CL:0000791;2.03e-12;18!CL:0000789;2.03e-12;18!CL:0002419;2.03e-12;18!CL:0000236;8.44e-10;13!CL:0002087;8.12e-09;104!CL:0000625;5.11e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.77e-29,53;CL:0000051,1.77e-29,53;CL:0000838,7.47e-29,52;CL:0000738,3.50e-28,136;CL:0000037,6.23e-23,168;CL:0002087,6.84e-23,115;CL:0000988,7.32e-23,177;CL:0002032,4.36e-20,161;CL:0000837,4.36e-20,161;CL:0002031,9.10e-19,120;CL:0000084,4.15e-14,25;CL:0000827,4.15e-14,25;CL:0000945,8.31e-14,24;CL:0000826,8.31e-14,24;CL:0000791,2.14e-12,18;CL:0000789,2.14e-12,18;CL:0002420,2.14e-12,18;CL:0002419,2.14e-12,18;CL:0000790,2.14e-12,18;CL:0000236,3.68e-10,14;CL:0000625,5.15e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.96e-17;53!CL:0000790;2.03e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-21!115;UBERON:0001049!4.26e-17!57;UBERON:0005068!4.26e-17!57;UBERON:0006241!4.26e-17!57;UBERON:0007135!4.26e-17!57;UBERON:0005743!2.49e-16!86;UBERON:0001017!1.63e-15!82;UBERON:0000073!1.84e-15!94;UBERON:0001016!1.84e-15!94;UBERON:0002780!6.78e-15!41;UBERON:0001890!6.78e-15!41;UBERON:0006240!6.78e-15!41;UBERON:0003080!2.01e-14!42;UBERON:0002616!3.46e-14!59;UBERON:0003075!1.13e-13!86;UBERON:0007284!1.13e-13!86;UBERON:0000955!1.56e-13!69;UBERON:0006238!1.56e-13!69;UBERON:0002346!2.28e-13!90;UBERON:0001869!2.55e-12!32;UBERON:0001893!2.76e-12!34;UBERON:0003056!5.49e-12!61;UBERON:0002020!5.98e-12!34;UBERON:0003528!5.98e-12!34;UBERON:0002791!7.72e-12!33;UBERON:0002619!2.14e-10!22;UBERON:0000956!6.84e-10!25;UBERON:0000203!6.84e-10!25;UBERON:0001950!1.62e-09!20;UBERON:0000178!4.20e-08!15;UBERON:0000179!4.20e-08!15;UBERON:0000463!4.20e-08!15;UBERON:0000153!8.98e-08!129;UBERON:0007811!8.98e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.55e-12;32!UBERON:0002780;1.18e-11;41!UBERON:0001890;1.18e-11;41!UBERON:0001893;1.69e-11;34!UBERON:0002791;2.77e-11;32!UBERON:0003528;3.52e-11;34!UBERON:0002020;3.52e-11;34!UBERON:0002619;3.81e-11;22!UBERON:0000073;5.47e-11;53!UBERON:0002616;5.47e-11;53!UBERON:0000956;1.87e-10;25!UBERON:0000203;1.87e-10;25!UBERON:0001950;3.39e-10;20!UBERON:0000178;1.12e-08;15!UBERON:0000179;1.12e-08;15!UBERON:0000463;1.12e-08;15!UBERON:0000955;2.13e-07;68!UBERON:0001017;2.70e-07;75!UBERON:0007023;8.69e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.58e-21,114;UBERON:0001049,6.75e-19,56;UBERON:0005068,6.75e-19,56;UBERON:0006241,6.75e-19,56;UBERON:0007135,6.75e-19,56;UBERON:0000073,7.69e-19,53;UBERON:0002616,7.69e-19,53;UBERON:0001017,2.60e-17,81;UBERON:0002780,4.83e-16,41;UBERON:0001890,4.83e-16,41;UBERON:0003080,4.83e-16,41;UBERON:0006240,4.83e-16,41;UBERON:0001016,7.10e-16,89;UBERON:0003075,2.07e-15,82;UBERON:0007284,2.07e-15,82;UBERON:0000955,3.61e-15,68;UBERON:0006238,3.61e-15,68;UBERON:0002346,4.96e-15,86;UBERON:0003056,1.34e-13,61;UBERON:0001869,3.03e-13,32;UBERON:0001893,3.31e-13,34;UBERON:0003528,7.65e-13,34;UBERON:0002020,7.65e-13,34;UBERON:0002791,1.95e-12,32;UBERON:0002619,3.72e-11,22;UBERON:0000956,1.31e-10,25;UBERON:0000203,1.31e-10,25;UBERON:0001950,3.35e-10,20;UBERON:0010371,8.97e-10,104;UBERON:0000178,1.15e-08,15;UBERON:0000179,1.15e-08,15;UBERON:0000463,1.15e-08,15 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,5.89761447603621,4.18680700783456,0.218441372130172,0,0.123766352960047,0.662794751455832,1.34465029290355,0.602694528023977,2.19093027116212,0.487932798790507,2.09305798730539,1.42800483870977,2.5076377718247,2.57612388417951,2.87436292653057,1.88313959392204,15.741161584078,12.8076919541915,14.1679406364623,18.8814852887474,16.5046641181801,10.9919447554414,0,0,0,66.3119236967382,47.7688621157736,11.7440175733939,11.0799081706375,14.8402891127905,14.7567392086779,1.56740831967947,5.50619232232265,1.80302897343931,2.4717700592526,3.02300754951048,6.79235371325885,3.0215774797739,2.87817521615278,5.26500830521676,2.8769239232215,1.7931249457037,2.60130452877444,3.7922024881028,2.5819387343353,9.47985406160392,5.27078550719293,1.09162460023138,5.61808711112712,7.03992952453076,5.45579346029359,12.7867425159808,1.31940520074686,1.59570926097305,2.55734850319616,4.93355705668593,1.70215567407342,9.9651559839292,3.26623264833766,3.65038042894141,3.47502151528187,1.81619850790011,2.94622108790052,3.79754864929061,3.59133986730301,6.59073329891635,3.98351426465914,0.786300418025466,0.901061357049038,2.25015821375912,10.5454715184262,13.9241674039363,10.959849225878,56.3187982276233,50.7908908473782,51.5915367240862,31.5780364699215,34.0336588980611,58.0499964354028,55.5277693139284,46.7486339722328,96.7662047486062,98.6558478143177,102.831498365687,18.5039860010636,7.8471198817415,7.11137028892708,68.0615804593862,69.169894243853,57.1572167218636,129.569533927776,39.762516529298,42.610302516126,75.9824240790854,62.3898558556972,42.7178565838514,43.4206433383897,58.4936345732434,84.1559970597686,74.0037687615707,56.2377633744572,54.9936535393838,87.2307288062508,69.5463981230063,69.2930744752357,77.3562876156828,90.3075461299602,34.106623930571,29.8955877569888,47.5677020996665,37.2721534759193,31.9030892389645,39.9189858668317,37.3426295312876,47.9949791829069,33.7312961691334,34.0959242943384,28.7394798922366,60.0788094809703,66.8600489458768,65.8951037666735,2.43806866313962,0,0.383587685530591,0.361439152384566,0,0.869079113764942,0,1.45990461090791,2.74150969775797,1.55210578223795,3.86473057049755,20.1707776266477,0,0.741568885568859,0.97364218096405,1.91542711029194,1.46253756570752,16.4558530770686,10.2959083940423,14.486842551853,0.596287222100115,0,1.04142150482278,1.69592382577203,0,0.275118041940067,1.46296476575767,1.03366703667732,2.49036383880697,0.33472061276467,1.61131726843659,0,0.488124115096339,0.367663080345869,0,0.446498641420399,0,0.337834441449967,1.53316637465883,0,0.916008719652036,129.144809087342,89.1894607541148,1.3082821564276,0,0.12663051166458,0.529636723252875,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.49333509683432,0,0.269421344139376,0,1.51357427644931,0.576175924479999,2.10889288650417,0.312160076830321,0,0.298897361103602,0.587172493218824,0.161872944368132,0.421352420106746,1.02077085627447,0.368502951935304,1.03325781175765,1.18800285728205,1.23633464639278,0,0,1.0100166837244,1.12606667884768,0.554128230968366,0,0,0.45071417671979,0.113432183160021,0.358779271377724,0.213557388818567,0,0.300091096084402,0.618315175430633,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0.386521706326594,0,0.286804595389004,3.78118489001746,4.37348235460901,3.71820617182459,4.14644220061482,3.28017106138317,3.6497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,3.80265104465493,5.89696330006576,4.13552934676983,30.0194907601962,0.614942192715568,1.3725424823882,0.109750285408626,1.1240175325762,0.201057944823262,0.555530670951178,5.2129328849652,0,2.88662684050547,2.78232971940184,2.93521735589554,0.577465791044295,0,0.380508304469197,2.37061319387782,2.57545848628462,0.738651018262192,0,0.297262324577456,0,0.503946384596579,0.141775097242386,0.0895585227028483,0.290633938513962,3.06706143332169,1.97065295158377,3.43388892651582,0.414656231081544,0.288239906833923,0.25248486685276,0,1.14596527667483,0,0,0.102827492703324,0,0,0.784917590417525,1.74384027533312,0.2933531432838,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0,0,0,1.64648067356154,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0.179060963239896,47.187845621275,59.503289580982,68.353941230467,55.572534709131,6.35236560556159,5.20559415430487,5.41302168944387,7.203199409377,3.18969375826582,113.849067639972,74.7903648010062,91.1714129559278,0.49076596687656,0,1.08506009479894,0.623912584592421,0.713715955188647,0,0.117141414992713,0.300946099727719,0,0,0,0,0.60818530127658,0.979005787313703,0.686286847621712,43.0077494335606,31.9257017211553,40.7699270809157,0,0,0,0,0,0,0,0,0,0,0,0.532685175939381,0.164254312027618,0,0.116210378459959,0.966875596732978,1.80455823272956,0.552485933615378,0.229628896329213,0,0.917870904715969,8.57279264524082,6.62331899097967,4.70609861506113,10.2297457257282,6.64975262025117,1.13733384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| |||
|short_description=p2@CYFIP2 | |||
}} |
Revision as of 08:40, 22 January 2014
Short description: | p2@CYFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CYFIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000347377, ENST00000520419, NM_001037332, uc003lwr.2_5end |
EntrezGene: | CYFIP2 |
HGNC: | 13760 |
UniProt: | E7EVF4E5RFQ0Q96F07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.77e-29 | 53 |
common lymphoid progenitor | 1.77e-29 | 53 |
lymphoid lineage restricted progenitor cell | 7.47e-29 | 52 |
leukocyte | 3.50e-28 | 136 |
hematopoietic stem cell | 6.23e-23 | 168 |
nongranular leukocyte | 6.84e-23 | 115 |
hematopoietic cell | 7.32e-23 | 177 |
hematopoietic oligopotent progenitor cell | 4.36e-20 | 161 |
hematopoietic multipotent progenitor cell | 4.36e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 9.10e-19 | 120 |
T cell | 4.15e-14 | 25 |
pro-T cell | 4.15e-14 | 25 |
lymphocyte of B lineage | 8.31e-14 | 24 |
pro-B cell | 8.31e-14 | 24 |
mature alpha-beta T cell | 2.14e-12 | 18 |
alpha-beta T cell | 2.14e-12 | 18 |
immature T cell | 2.14e-12 | 18 |
mature T cell | 2.14e-12 | 18 |
immature alpha-beta T cell | 2.14e-12 | 18 |
B cell | 3.68e-10 | 14 |
CD8-positive, alpha-beta T cell | 5.15e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.58e-21 | 114 |
neural tube | 6.75e-19 | 56 |
neural rod | 6.75e-19 | 56 |
future spinal cord | 6.75e-19 | 56 |
neural keel | 6.75e-19 | 56 |
regional part of nervous system | 7.69e-19 | 53 |
regional part of brain | 7.69e-19 | 53 |
central nervous system | 2.60e-17 | 81 |
regional part of forebrain | 4.83e-16 | 41 |
forebrain | 4.83e-16 | 41 |
anterior neural tube | 4.83e-16 | 41 |
future forebrain | 4.83e-16 | 41 |
nervous system | 7.10e-16 | 89 |
neural plate | 2.07e-15 | 82 |
presumptive neural plate | 2.07e-15 | 82 |
brain | 3.61e-15 | 68 |
future brain | 3.61e-15 | 68 |
neurectoderm | 4.96e-15 | 86 |
pre-chordal neural plate | 1.34e-13 | 61 |
cerebral hemisphere | 3.03e-13 | 32 |
telencephalon | 3.31e-13 | 34 |
brain grey matter | 7.65e-13 | 34 |
gray matter | 7.65e-13 | 34 |
regional part of telencephalon | 1.95e-12 | 32 |
regional part of cerebral cortex | 3.72e-11 | 22 |
cerebral cortex | 1.31e-10 | 25 |
pallium | 1.31e-10 | 25 |
neocortex | 3.35e-10 | 20 |
ecto-epithelium | 8.97e-10 | 104 |
blood | 1.15e-08 | 15 |
haemolymphatic fluid | 1.15e-08 | 15 |
organism substance | 1.15e-08 | 15 |