FFCP PHASE1:Hg19::chr6:132270471..132270530,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2500 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-84bp_to_AF127918_5end | |||
|coexpression_cluster_id=C506 | |||
|description=CAGE_peak_5_at_CTGF_5end | |||
|id=chr6:132270471..132270530,- | |||
|ontology_enrichment_celltype=CL:0000055!1.25e-27!180;CL:0000222!6.34e-24!119;CL:0000192!1.23e-14!42;CL:0000514!1.23e-14!42;CL:0000680!2.44e-14!57;CL:0000056!2.44e-14!57;CL:0000355!2.44e-14!57;CL:0000183!3.14e-14!59;CL:0000220!4.86e-14!246;CL:0002321!6.63e-14!248;CL:0000187!9.70e-14!54;CL:0000057!1.43e-13!75;CL:0000359!1.27e-12!32;CL:0000393!4.62e-12!60;CL:0000211!4.62e-12!60;CL:0000115!5.24e-12!35;CL:0000213!4.93e-11!57;CL:0000215!4.93e-11!57;CL:0002139!1.26e-10!24;CL:0002078!4.69e-10!44;CL:0000071!8.00e-08!18;CL:0002546!8.00e-08!18;CL:0002494!3.78e-07!16;CL:0002371!9.03e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.98e-15;36!CL:0002139;1.02e-14;24!CL:0000359;3.78e-13;32!CL:0002078;1.09e-10;45!CL:0000192;2.61e-10;43!CL:0000071;4.36e-10;18!CL:0002334;3.33e-09;12!CL:0002494;4.86e-09;16!CL:1000413;3.56e-08;9!CL:0000213;3.08e-07;58!CL:0000215;3.08e-07;58!CL:0002548;3.52e-07;6!CL:0000153;4.53e-07;9!CL:0000447;4.53e-07;9!CL:0000138;5.89e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.95e-21,121;CL:0000115,5.90e-18,36;CL:0002078,8.37e-15,45;CL:0002139,1.30e-14,24;CL:0000192,2.37e-14,43;CL:0000514,2.37e-14,43;CL:0000359,1.56e-13,32;CL:0000213,6.46e-12,58;CL:0000215,6.46e-12,58;CL:0000057,8.59e-12,76;CL:0000187,3.49e-11,55;CL:0000680,6.61e-11,58;CL:0000056,6.61e-11,58;CL:0000355,6.61e-11,58;CL:0000071,3.28e-10,18;CL:0002546,3.28e-10,18;CL:0002321,1.25e-09,250;CL:0000393,3.46e-09,61;CL:0000211,3.46e-09,61;CL:0002334,3.55e-09,12;CL:0002494,5.52e-09,16;CL:1000413,2.51e-08,9;CL:0000048,7.92e-08,427;CL:0000153,2.11e-07,9;CL:0000447,2.11e-07,9;CL:0000723,2.49e-07,433;CL:0002548,2.77e-07,6;CL:0000058,4.03e-07,6;CL:0000138,4.03e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;2.61e-10;43!CL:0002546;4.36e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.24e-29!79;UBERON:0007798!4.24e-29!79;UBERON:0004872!9.17e-26!84;UBERON:0003914!4.84e-25!118;UBERON:0000055!4.87e-25!69;UBERON:0004535!3.07e-23!110;UBERON:0001009!8.71e-23!113;UBERON:0001981!1.84e-22!60;UBERON:0007500!1.84e-22!60;UBERON:0004537!1.84e-22!60;UBERON:0006965!1.84e-22!60;UBERON:0001637!1.88e-19!42;UBERON:0003509!1.88e-19!42;UBERON:0004572!1.88e-19!42;UBERON:0000490!9.92e-18!138;UBERON:0005256!6.07e-16!143;UBERON:0002100!6.39e-16!216;UBERON:0004573!8.61e-15!33;UBERON:0004571!8.61e-15!33;UBERON:0001134!1.71e-13!61;UBERON:0002036!1.71e-13!61;UBERON:0003082!1.71e-13!61;UBERON:0002385!1.78e-13!63;UBERON:0001015!1.78e-13!63;UBERON:0000383!1.78e-13!63;UBERON:0000477!2.29e-13!286;UBERON:0000914!6.03e-13!83;UBERON:0002329!6.03e-13!83;UBERON:0003077!6.03e-13!83;UBERON:0003059!6.03e-13!83;UBERON:0007282!6.03e-13!83;UBERON:0009618!6.03e-13!83;UBERON:0007285!6.03e-13!83;UBERON:0004290!6.03e-12!70;UBERON:0000947!2.29e-11!21;UBERON:0010191!2.29e-11!21;UBERON:0000119!3.22e-11!312;UBERON:0000483!4.09e-11!309;UBERON:0000486!4.40e-11!82;UBERON:0000475!1.88e-10!365;UBERON:0004111!2.42e-10!241;UBERON:0006914!2.02e-09!25;UBERON:0003104!2.53e-09!238;UBERON:0009142!2.53e-09!238;UBERON:0000487!2.57e-09!22;UBERON:0000468!5.38e-09!659;UBERON:0000025!2.37e-08!194;UBERON:0001986!8.00e-08!18;UBERON:0004638!8.00e-08!18;UBERON:0004852!8.00e-08!18;UBERON:0000926!1.18e-07!448;UBERON:0004120!1.18e-07!448;UBERON:0006603!1.18e-07!448;UBERON:0000467!1.54e-07!625;UBERON:0000480!2.11e-07!626;UBERON:0009569!3.08e-07!113;UBERON:0000481!3.29e-07!347;UBERON:0000948!5.54e-07!24;UBERON:0005498!5.54e-07!24;UBERON:0004140!5.54e-07!24;UBERON:0009881!5.54e-07!24;UBERON:0004141!5.54e-07!24;UBERON:0003084!5.54e-07!24;UBERON:0007005!5.54e-07!24;UBERON:0004139!5.54e-07!24;UBERON:0004291!5.54e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.70e-21;42!UBERON:0003509;4.70e-21;42!UBERON:0004572;4.70e-21;42!UBERON:0004573;3.54e-19;33!UBERON:0004571;3.54e-19;33!UBERON:0007500;4.96e-16;56!UBERON:0001981;4.96e-16;56!UBERON:0004537;4.96e-16;56!UBERON:0000055;1.93e-15;65!UBERON:0000947;1.83e-14;21!UBERON:0010191;1.83e-14;21!UBERON:0002049;3.07e-14;75!UBERON:0007798;3.07e-14;75!UBERON:0006914;7.00e-12;25!UBERON:0003914;1.15e-11;74!UBERON:0000487;2.23e-11;22!UBERON:0004638;4.36e-10;18!UBERON:0001986;4.36e-10;18!UBERON:0004852;4.36e-10;18!UBERON:0003688;8.63e-09;6!UBERON:0002358;8.63e-09;6!UBERON:0003684;8.63e-09;6!UBERON:0001178;8.63e-09;6!UBERON:0004457;1.45e-08;9!UBERON:0000042;1.45e-08;9!UBERON:0004535;1.62e-08;109!UBERON:0003915;3.56e-08;9!UBERON:0004700;3.56e-08;9!UBERON:0001917;3.56e-08;9!UBERON:0001009;1.37e-07;112!UBERON:0000490;1.48e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,8.19e-32,83;UBERON:0000055,3.36e-31,68;UBERON:0002049,3.67e-31,78;UBERON:0007798,3.67e-31,78;UBERON:0007500,7.00e-29,59;UBERON:0001981,7.00e-29,59;UBERON:0004537,7.00e-29,59;UBERON:0006965,7.00e-29,59;UBERON:0001637,1.95e-28,42;UBERON:0003509,1.95e-28,42;UBERON:0004572,1.95e-28,42;UBERON:0004535,2.03e-27,109;UBERON:0001009,4.34e-26,112;UBERON:0003914,3.64e-25,117;UBERON:0004573,4.96e-21,33;UBERON:0004571,4.96e-21,33;UBERON:0000947,1.54e-14,21;UBERON:0010191,1.54e-14,21;UBERON:0000490,1.72e-12,148;UBERON:0006914,3.80e-12,25;UBERON:0007503,1.24e-11,78;UBERON:0000487,1.73e-11,22;UBERON:0001134,1.93e-10,62;UBERON:0002036,1.93e-10,62;UBERON:0003082,1.93e-10,62;UBERON:0004638,3.28e-10,18;UBERON:0001986,3.28e-10,18;UBERON:0004852,3.28e-10,18;UBERON:0000926,4.14e-10,315;UBERON:0004120,4.14e-10,315;UBERON:0006603,4.14e-10,315;UBERON:0002385,8.16e-10,64;UBERON:0001015,8.16e-10,64;UBERON:0000383,8.16e-10,64;UBERON:0007524,1.02e-09,73;UBERON:0003081,1.08e-09,203;UBERON:0002329,2.33e-09,71;UBERON:0003059,2.33e-09,71;UBERON:0007282,2.33e-09,71;UBERON:0004290,2.33e-09,71;UBERON:0009618,2.33e-09,71;UBERON:0000025,2.90e-09,192;UBERON:0004111,3.14e-09,240;UBERON:0003077,4.30e-09,72;UBERON:0007285,4.30e-09,72;UBERON:0005256,4.96e-09,122;UBERON:0003688,8.98e-09,6;UBERON:0002358,8.98e-09,6;UBERON:0003684,8.98e-09,6;UBERON:0001178,8.98e-09,6;UBERON:0003915,2.51e-08,9;UBERON:0004700,2.51e-08,9;UBERON:0001917,2.51e-08,9;UBERON:0002100,6.22e-08,199;UBERON:0000948,6.42e-08,24;UBERON:0005498,6.42e-08,24;UBERON:0004140,6.42e-08,24;UBERON:0009881,6.42e-08,24;UBERON:0004141,6.42e-08,24;UBERON:0003084,6.42e-08,24;UBERON:0007005,6.42e-08,24;UBERON:0004139,6.42e-08,24;UBERON:0004291,6.42e-08,24;UBERON:0000486,7.14e-08,83;UBERON:0000483,1.09e-07,306;UBERON:0000119,2.10e-07,309;UBERON:0004457,2.95e-07,12;UBERON:0000042,2.95e-07,12;UBERON:0003104,8.53e-07,160;UBERON:0009142,8.53e-07,160 | |||
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| |||
|short_description=p5@CTGF | |||
}} |
Revision as of 13:54, 22 January 2014
Short description: | p5@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CTGF_5end |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | -84bp_to_AF127918_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.95e-21 | 121 |
endothelial cell | 5.90e-18 | 36 |
meso-epithelial cell | 8.37e-15 | 45 |
endothelial cell of vascular tree | 1.30e-14 | 24 |
smooth muscle cell | 2.37e-14 | 43 |
smooth muscle myoblast | 2.37e-14 | 43 |
vascular associated smooth muscle cell | 1.56e-13 | 32 |
lining cell | 6.46e-12 | 58 |
barrier cell | 6.46e-12 | 58 |
fibroblast | 8.59e-12 | 76 |
muscle cell | 3.49e-11 | 55 |
muscle precursor cell | 6.61e-11 | 58 |
myoblast | 6.61e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.61e-11 | 58 |
blood vessel endothelial cell | 3.28e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.28e-10 | 18 |
embryonic cell | 1.25e-09 | 250 |
electrically responsive cell | 3.46e-09 | 61 |
electrically active cell | 3.46e-09 | 61 |
preadipocyte | 3.55e-09 | 12 |
cardiocyte | 5.52e-09 | 16 |
endothelial cell of artery | 2.51e-08 | 9 |
multi fate stem cell | 7.92e-08 | 427 |
GAG secreting cell | 2.11e-07 | 9 |
carbohydrate secreting cell | 2.11e-07 | 9 |
somatic stem cell | 2.49e-07 | 433 |
cardiac fibroblast | 2.77e-07 | 6 |
chondroblast | 4.03e-07 | 6 |
chondrocyte | 4.03e-07 | 6 |