FFCP PHASE1:Mm9::chr2:121097139..121097146,-: Difference between revisions
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{{FFCP|EntrezGene=27223|HGNC=|UniProt=A2AU91|association_with_transcript=0bp_to_ENSMUST00000110648_5end|description=CAGE_peak_4_at_Trp53bp1_5end|id=chr2:121097139..121097146,-|ontology_enrichment_celltype=CL:0000117!8.66e-12!23;CL:0000337!8.66e-12!23;CL:0000540!2.56e-10!33;CL:0000047!2.56e-10!33;CL:0000031!2.56e-10!33;CL:0000404!2.56e-10!33;CL:0000393!1.31e-08!39;CL:0000211!1.31e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-33,23;CL:0000337,2.05e-33,23;CL:0000540,7.46e-23,33;CL:0000047,7.46e-23,33;CL:0000031,7.46e-23,33;CL:0000404,7.46e-23,33;CL:0000393,4.15e-19,39;CL:0000211,4.15e-19,39;CL:0002319,3.45e-17,43;CL:0000221,9.20e-17,44;CL:0000133,9.20e-17,44;CL:0002609,2.20e-15,6;CL:0002321,6.09e-10,70;CL:0002608,8.48e-09,3;CL:0000723,1.10e-08,91;CL:0000048,1.10e-08,91;CL:0002614,1.31e-08,3;CL:0002613,2.18e-08,3;CL:0002612,3.32e-08,3;CL:0000034,4.91e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.35e-07!102;UBERON:0000924!3.35e-07!102;UBERON:0006601!3.35e-07!102;UBERON:0002346!4.53e-07!71;UBERON:0003075!4.53e-07!71;UBERON:0007284!4.53e-07!71;UBERON:0000073!6.95e-07!75;UBERON:0001016!6.95e-07!75;UBERON:0001017!9.93e-07!73;UBERON:0005743!9.93e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.87e-22,34;UBERON:0003528,3.84e-18,29;UBERON:0002791,3.84e-18,29;UBERON:0001893,3.84e-18,29;UBERON:0002420,1.11e-17,8;UBERON:0007245,1.11e-17,8;UBERON:0010009,1.11e-17,8;UBERON:0010011,1.11e-17,8;UBERON:0000454,1.11e-17,8;UBERON:0000073,9.59e-16,54;UBERON:0001049,6.07e-14,52;UBERON:0005068,6.07e-14,52;UBERON:0006241,6.07e-14,52;UBERON:0007135,6.07e-14,52;UBERON:0001017,3.20e-13,73;UBERON:0002780,3.59e-13,39;UBERON:0001890,3.59e-13,39;UBERON:0006240,3.59e-13,39;UBERON:0001016,8.07e-13,75;UBERON:0003080,8.25e-13,40;UBERON:0002346,5.00e-11,64;UBERON:0003075,5.00e-11,64;UBERON:0007284,5.00e-11,64;UBERON:0002616,5.70e-11,46;UBERON:0000369,1.02e-10,5;UBERON:0002435,1.02e-10,5;UBERON:0000204,1.02e-10,5;UBERON:0010082,1.02e-10,5;UBERON:0000955,1.04e-10,47;UBERON:0006238,1.04e-10,47;UBERON:0003056,3.22e-10,49;UBERON:0004121,9.94e-10,95;UBERON:0000924,9.94e-10,95;UBERON:0006601,9.94e-10,95;UBERON:0010371,1.83e-09,73;UBERON:0002038,1.31e-08,3;UBERON:0009663,1.31e-08,3;UBERON:0009661,1.31e-08,3;UBERON:0000125,1.31e-08,3;UBERON:0002308,1.31e-08,3;UBERON:0002257,3.32e-08,3;UBERON:0001954,7.61e-08,7;UBERON:0003022,7.61e-08,7;UBERON:0002421,7.61e-08,7;UBERON:0000349,7.61e-08,7;UBERON:0002600,7.61e-08,7;UBERON:0010314,3.68e-07,92|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.10556277196391,0.297872853602656,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0,0.202316460859598,0.528990979272033,1.90149421051854,0,0.889294796111139,0,0,0,0,0,1.55534418462716,0.945041568321835,1.05162480675691,0.856952953211411,0.662605622854841,0.61245399607477,2.01275489138296,4.5960939330501,0,1.0214987046815,0.768032666281217,1.05509030184155,2.19570344645783,0,0.837548997004143,2.25105044012672,1.5279824777681,0.294628585473668,1.42371680799103,1.1183966749518,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.519572009205738,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0,0.301445281105245,0.117588707135705,0.502666365318702,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0.457500602818626,1.88481528169297,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0.407357455401265,0.248813941220186,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0.150704817835715,0.612328492361951,0.12811372028485,0.468508622798644,0,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,1.02904612379284,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.561086559122548,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0.333690211432188,0,0,0,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.390267295715598,0.315270288212382,0,0.478364305972461,0,0,0.289298117163023,1.50791283939272,0,0,0.275936746304732,0,0.35163505977661,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0.849229592366497,0,0.584511715822624,0,0.321321316421807,0.283880170416537,0.534196811001766,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0,0.32977250588296,0.322928853391811,0.120625849856312,0.477489376012546,0,0,0.18542530201051,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0.324016022465404,0,0,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0.56369293868419,0.598066184175915,0.330916980914195,0.972255941720238,0.516639293910924,0.337912250981556,0.117357238645754,0.5208175393758,0.419437377702843,0.241584120826006,0.576060012515731,0,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0,0.228620419965,0.201652370273681,0,0.192423683280659,0.116876902181569,0,0,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0,0,0.68741272937475,0,0,0,0,0,0,0.62272408550506,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.187283014939765,0.320125762024346,0.574354689556133,0.476293691283074,0.115884325944855,0.77163688185482,0.412085900803307,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0,0,0.182927972872773,0.263069711437843,0.950628796921032,0,0.593175090620871,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0.749431733813838,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p4@Trp53bp1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:27223 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AU91 | |||
|association_with_transcript=0bp_to_ENSMUST00000110648_5end | |||
|cluster_id=chr2:121097139..121097146,- | |||
|description=CAGE_peak_4_at_Trp53bp1_5end | |||
|id=chr2:121097139..121097146,- | |||
|ontology_enrichment_celltype=CL:0000117!8.66e-12!23;CL:0000337!8.66e-12!23;CL:0000540!2.56e-10!33;CL:0000047!2.56e-10!33;CL:0000031!2.56e-10!33;CL:0000404!2.56e-10!33;CL:0000393!1.31e-08!39;CL:0000211!1.31e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-33,23;CL:0000337,2.05e-33,23;CL:0000540,7.46e-23,33;CL:0000047,7.46e-23,33;CL:0000031,7.46e-23,33;CL:0000404,7.46e-23,33;CL:0000393,4.15e-19,39;CL:0000211,4.15e-19,39;CL:0002319,3.45e-17,43;CL:0000221,9.20e-17,44;CL:0000133,9.20e-17,44;CL:0002609,2.20e-15,6;CL:0002321,6.09e-10,70;CL:0002608,8.48e-09,3;CL:0000723,1.10e-08,91;CL:0000048,1.10e-08,91;CL:0002614,1.31e-08,3;CL:0002613,2.18e-08,3;CL:0002612,3.32e-08,3;CL:0000034,4.91e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.35e-07!102;UBERON:0000924!3.35e-07!102;UBERON:0006601!3.35e-07!102;UBERON:0002346!4.53e-07!71;UBERON:0003075!4.53e-07!71;UBERON:0007284!4.53e-07!71;UBERON:0000073!6.95e-07!75;UBERON:0001016!6.95e-07!75;UBERON:0001017!9.93e-07!73;UBERON:0005743!9.93e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.87e-22,34;UBERON:0003528,3.84e-18,29;UBERON:0002791,3.84e-18,29;UBERON:0001893,3.84e-18,29;UBERON:0002420,1.11e-17,8;UBERON:0007245,1.11e-17,8;UBERON:0010009,1.11e-17,8;UBERON:0010011,1.11e-17,8;UBERON:0000454,1.11e-17,8;UBERON:0000073,9.59e-16,54;UBERON:0001049,6.07e-14,52;UBERON:0005068,6.07e-14,52;UBERON:0006241,6.07e-14,52;UBERON:0007135,6.07e-14,52;UBERON:0001017,3.20e-13,73;UBERON:0002780,3.59e-13,39;UBERON:0001890,3.59e-13,39;UBERON:0006240,3.59e-13,39;UBERON:0001016,8.07e-13,75;UBERON:0003080,8.25e-13,40;UBERON:0002346,5.00e-11,64;UBERON:0003075,5.00e-11,64;UBERON:0007284,5.00e-11,64;UBERON:0002616,5.70e-11,46;UBERON:0000369,1.02e-10,5;UBERON:0002435,1.02e-10,5;UBERON:0000204,1.02e-10,5;UBERON:0010082,1.02e-10,5;UBERON:0000955,1.04e-10,47;UBERON:0006238,1.04e-10,47;UBERON:0003056,3.22e-10,49;UBERON:0004121,9.94e-10,95;UBERON:0000924,9.94e-10,95;UBERON:0006601,9.94e-10,95;UBERON:0010371,1.83e-09,73;UBERON:0002038,1.31e-08,3;UBERON:0009663,1.31e-08,3;UBERON:0009661,1.31e-08,3;UBERON:0000125,1.31e-08,3;UBERON:0002308,1.31e-08,3;UBERON:0002257,3.32e-08,3;UBERON:0001954,7.61e-08,7;UBERON:0003022,7.61e-08,7;UBERON:0002421,7.61e-08,7;UBERON:0000349,7.61e-08,7;UBERON:0002600,7.61e-08,7;UBERON:0010314,3.68e-07,92 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.10556277196391,0.297872853602656,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0,0.202316460859598,0.528990979272033,1.90149421051854,0,0.889294796111139,0,0,0,0,0,1.55534418462716,0.945041568321835,1.05162480675691,0.856952953211411,0.662605622854841,0.61245399607477,2.01275489138296,4.5960939330501,0,1.0214987046815,0.768032666281217,1.05509030184155,2.19570344645783,0,0.837548997004143,2.25105044012672,1.5279824777681,0.294628585473668,1.42371680799103,1.1183966749518,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.519572009205738,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0,0.301445281105245,0.117588707135705,0.502666365318702,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0.457500602818626,1.88481528169297,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0.407357455401265,0.248813941220186,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0.150704817835715,0.612328492361951,0.12811372028485,0.468508622798644,0,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,1.02904612379284,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.561086559122548,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0.333690211432188,0,0,0,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.390267295715598,0.315270288212382,0,0.478364305972461,0,0,0.289298117163023,1.50791283939272,0,0,0.275936746304732,0,0.35163505977661,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0.849229592366497,0,0.584511715822624,0,0.321321316421807,0.283880170416537,0.534196811001766,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0,0.32977250588296,0.322928853391811,0.120625849856312,0.477489376012546,0,0,0.18542530201051,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0.324016022465404,0,0,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0.56369293868419,0.598066184175915,0.330916980914195,0.972255941720238,0.516639293910924,0.337912250981556,0.117357238645754,0.5208175393758,0.419437377702843,0.241584120826006,0.576060012515731,0,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0,0.228620419965,0.201652370273681,0,0.192423683280659,0.116876902181569,0,0,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0,0,0.68741272937475,0,0,0,0,0,0,0.62272408550506,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.187283014939765,0.320125762024346,0.574354689556133,0.476293691283074,0.115884325944855,0.77163688185482,0.412085900803307,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0,0,0.182927972872773,0.263069711437843,0.950628796921032,0,0.593175090620871,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0.749431733813838,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Trp53bp1 | |||
}} |
Revision as of 21:37, 3 August 2015
Short description: | p4@Trp53bp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trp53bp1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000110648_5end |
EntrezGene: | 27223 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.05e-33 | 23 |
neuroblast (sensu Vertebrata) | 2.05e-33 | 23 |
neuron | 7.46e-23 | 33 |
neuronal stem cell | 7.46e-23 | 33 |
neuroblast | 7.46e-23 | 33 |
electrically signaling cell | 7.46e-23 | 33 |
electrically responsive cell | 4.15e-19 | 39 |
electrically active cell | 4.15e-19 | 39 |
neural cell | 3.45e-17 | 43 |
ectodermal cell | 9.20e-17 | 44 |
neurectodermal cell | 9.20e-17 | 44 |
neuron of cerebral cortex | 2.20e-15 | 6 |
embryonic cell | 6.09e-10 | 70 |
hippocampal neuron | 8.48e-09 | 3 |
somatic stem cell | 1.10e-08 | 91 |
multi fate stem cell | 1.10e-08 | 91 |
neuron of the substantia nigra | 1.31e-08 | 3 |
striatum neuron | 2.18e-08 | 3 |
neuron of the ventral spinal cord | 3.32e-08 | 3 |
stem cell | 4.91e-08 | 97 |