FFCP PHASE1:Mm9::chr5:138660961..138660968,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000122520_5end|description=CAGE_peak_1_at_ENSMUST00000122520_5end|id=chr5:138660961..138660968,+|ontology_enrichment_celltype=CL:0000548!7.09e-39!115;CL:0000004!7.09e-39!115;CL:0000255!7.09e-39!115;CL:0002371!4.00e-37!118;CL:0000144!1.84e-35!121;CL:0000012!1.84e-35!121;CL:0000723!1.64e-34!91;CL:0000048!1.64e-34!91;CL:0000034!4.44e-34!97;CL:0002319!3.08e-25!43;CL:0000055!7.70e-25!50;CL:0002321!1.60e-24!70;CL:0000220!1.60e-24!70;CL:0000221!2.63e-24!44;CL:0000133!2.63e-24!44;CL:0000393!5.75e-22!39;CL:0000211!5.75e-22!39;CL:0000540!9.30e-22!33;CL:0000047!9.30e-22!33;CL:0000031!9.30e-22!33;CL:0000404!9.30e-22!33;CL:0000219!1.04e-17!54;CL:0000117!1.70e-16!23;CL:0000337!1.70e-16!23;CL:0002320!6.23e-15!46;CL:0000134!6.23e-15!46;CL:0002031!1.45e-11!25;CL:0000063!8.32e-11!66;CL:0000839!4.73e-10!13;CL:0000763!1.63e-09!16;CL:0000988!5.10e-09!32;CL:0002032!5.10e-09!32;CL:0000037!5.10e-09!32;CL:0000566!5.10e-09!32;CL:0000837!5.10e-09!32;CL:0000414!8.43e-08!11;CL:0000050!1.07e-07!9;CL:0000107!2.20e-07!9;CL:0000049!3.03e-07!19|ontology_enrichment_celltype_v019_2=CL:0002319,5.98e-31,43;CL:0000221,5.29e-30,44;CL:0000133,5.29e-30,44;CL:0000723,3.21e-28,91;CL:0000048,3.21e-28,91;CL:0000540,9.37e-27,33;CL:0000047,9.37e-27,33;CL:0000031,9.37e-27,33;CL:0000404,9.37e-27,33;CL:0000393,9.87e-27,39;CL:0000211,9.87e-27,39;CL:0002321,1.09e-26,70;CL:0000034,1.37e-25,97;CL:0000117,1.29e-18,23;CL:0000337,1.29e-18,23;CL:0000219,2.00e-10,54;CL:0000107,3.06e-10,9;CL:0000839,1.01e-07,13;CL:0000128,1.85e-07,6;CL:0000126,1.85e-07,6;CL:0000127,1.85e-07,6;CL:0002320,4.76e-07,46;CL:0000134,4.76e-07,46;CL:0002453,5.86e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.13e-23!73;UBERON:0005743!3.13e-23!73;UBERON:0000073!4.45e-22!75;UBERON:0001016!4.45e-22!75;UBERON:0002020!1.61e-16!34;UBERON:0002384!6.23e-15!46;UBERON:0002791!4.90e-14!29;UBERON:0003528!4.90e-14!29;UBERON:0001893!4.90e-14!29;UBERON:0004121!8.65e-12!102;UBERON:0000924!8.65e-12!102;UBERON:0006601!8.65e-12!102;UBERON:0001049!9.33e-12!52;UBERON:0005068!9.33e-12!52;UBERON:0006241!9.33e-12!52;UBERON:0007135!9.33e-12!52;UBERON:0000956!1.05e-11!21;UBERON:0001869!1.05e-11!21;UBERON:0000203!1.05e-11!21;UBERON:0002616!3.96e-11!49;UBERON:0002619!7.08e-11!17;UBERON:0000955!1.10e-10!50;UBERON:0006238!1.10e-10!50;UBERON:0003080!7.17e-10!40;UBERON:0002021!1.01e-09!10;UBERON:0000411!1.01e-09!10;UBERON:0001950!1.01e-09!10;UBERON:0002780!1.21e-09!39;UBERON:0001890!1.21e-09!39;UBERON:0006240!1.21e-09!39;UBERON:0002371!6.86e-09!16;UBERON:0002346!4.17e-08!71;UBERON:0003075!4.17e-08!71;UBERON:0007284!4.17e-08!71;UBERON:0002410!2.20e-07!9;UBERON:0003056!5.86e-07!49;UBERON:0000033!8.21e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-28,73;UBERON:0001016,2.13e-27,75;UBERON:0002020,1.14e-20,34;UBERON:0003528,5.39e-20,29;UBERON:0002791,5.39e-20,29;UBERON:0001893,5.39e-20,29;UBERON:0004121,6.71e-19,95;UBERON:0000924,6.71e-19,95;UBERON:0006601,6.71e-19,95;UBERON:0000073,2.06e-16,54;UBERON:0002619,5.09e-16,17;UBERON:0000956,5.73e-16,21;UBERON:0001869,5.73e-16,21;UBERON:0000203,5.73e-16,21;UBERON:0002021,1.03e-13,10;UBERON:0000411,1.03e-13,10;UBERON:0001950,1.03e-13,10;UBERON:0001049,2.66e-13,52;UBERON:0005068,2.66e-13,52;UBERON:0006241,2.66e-13,52;UBERON:0007135,2.66e-13,52;UBERON:0002780,4.13e-13,39;UBERON:0001890,4.13e-13,39;UBERON:0006240,4.13e-13,39;UBERON:0003080,1.28e-12,40;UBERON:0002616,1.52e-12,46;UBERON:0002346,3.57e-12,64;UBERON:0003075,3.57e-12,64;UBERON:0007284,3.57e-12,64;UBERON:0000955,3.99e-12,47;UBERON:0006238,3.99e-12,47;UBERON:0002410,3.06e-10,9;UBERON:0010371,1.22e-09,73;UBERON:0003056,4.01e-09,49;UBERON:0000010,4.99e-08,11;UBERON:0010314,5.76e-08,92;UBERON:0002384,4.76e-07,46;UBERON:0011216,6.79e-07,194|phase1_expression=0,0,0.454999239389536,0,1.00179145989269,0,0.233612640595526,1.16210991097419,1.40788722151667,1.40438715793196,0.171217968225505,0.239316476986009,0.513602189793617,0.34968160967599,3.66420737997229,0.607425802169478,4.19737126876888,0.473193248037357,0.822686601634433,3.81950686618227,0,0.0992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,18.4158895303293,14.7615549020297,31.6963362030877,0,0,0,0,0,0,0,0.683045484958446,0,0,0.101376931219515,0,7.82391344348039,2.18025156380447,1.5378032791413,3.30530828426282,1.81982348112971,4.31257693094915,0,0,0.672187598284928,1.28629718017973,2.57880095944881,4.12537673821954,3.03474691289397,10.5798195854407,7.60597684207415,0.677689064138264,9.78224275722253,0.449949858640699,14.8329954385046,13.4991221839759,1.19840044207362,0.768436610643109,0.414758449233911,5.53524347159932,2.3135745748652,0.571301968807607,1.98781686856452,2.20483438586917,2.97120960156533,10.1114066527102,23.1243350098716,2.80912143787413,2.76491759861238,5.40733779693795,2.8361169516747,1.04182674111352,2.79182999001381,2.8138130501584,3.81995619442025,1.76777151284201,0.569486723196412,1.1183966749518,0,0,0.289864488701678,0,1.3599426674155,3.77792234146472,5.19821133958135,4.03224198387602,0,0,1.81850203222008,0.70667914902068,0,0,0,0,0.432982082022428,1.26679932737549,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,7.53956419696361,2.71952841909355,0,0,0,0,0,0,1.57754109708128,1.56175497718655,4.30846795465598,3.34556317133573,4.90157082981267,2.54768877709949,2.83367491172426,2.04579100537918,3.95287777946523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.887943813496259,0.179427713218951,0.503653849092235,0,0,0,0,0,3.3885110557024,5.06357760157895,6.30185064783336,1.89038500578056,6.85082519770642,10.5755145634558,4.72515750162264,5.85417564191487,6.79713613476307,5.69536342927002,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p1@ENSMUST00000122520}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000122520_5end | |||
|cluster_id=chr5:138660961..138660968,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000122520_5end | |||
|id=chr5:138660961..138660968,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.09e-39!115;CL:0000004!7.09e-39!115;CL:0000255!7.09e-39!115;CL:0002371!4.00e-37!118;CL:0000144!1.84e-35!121;CL:0000012!1.84e-35!121;CL:0000723!1.64e-34!91;CL:0000048!1.64e-34!91;CL:0000034!4.44e-34!97;CL:0002319!3.08e-25!43;CL:0000055!7.70e-25!50;CL:0002321!1.60e-24!70;CL:0000220!1.60e-24!70;CL:0000221!2.63e-24!44;CL:0000133!2.63e-24!44;CL:0000393!5.75e-22!39;CL:0000211!5.75e-22!39;CL:0000540!9.30e-22!33;CL:0000047!9.30e-22!33;CL:0000031!9.30e-22!33;CL:0000404!9.30e-22!33;CL:0000219!1.04e-17!54;CL:0000117!1.70e-16!23;CL:0000337!1.70e-16!23;CL:0002320!6.23e-15!46;CL:0000134!6.23e-15!46;CL:0002031!1.45e-11!25;CL:0000063!8.32e-11!66;CL:0000839!4.73e-10!13;CL:0000763!1.63e-09!16;CL:0000988!5.10e-09!32;CL:0002032!5.10e-09!32;CL:0000037!5.10e-09!32;CL:0000566!5.10e-09!32;CL:0000837!5.10e-09!32;CL:0000414!8.43e-08!11;CL:0000050!1.07e-07!9;CL:0000107!2.20e-07!9;CL:0000049!3.03e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.98e-31,43;CL:0000221,5.29e-30,44;CL:0000133,5.29e-30,44;CL:0000723,3.21e-28,91;CL:0000048,3.21e-28,91;CL:0000540,9.37e-27,33;CL:0000047,9.37e-27,33;CL:0000031,9.37e-27,33;CL:0000404,9.37e-27,33;CL:0000393,9.87e-27,39;CL:0000211,9.87e-27,39;CL:0002321,1.09e-26,70;CL:0000034,1.37e-25,97;CL:0000117,1.29e-18,23;CL:0000337,1.29e-18,23;CL:0000219,2.00e-10,54;CL:0000107,3.06e-10,9;CL:0000839,1.01e-07,13;CL:0000128,1.85e-07,6;CL:0000126,1.85e-07,6;CL:0000127,1.85e-07,6;CL:0002320,4.76e-07,46;CL:0000134,4.76e-07,46;CL:0002453,5.86e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.13e-23!73;UBERON:0005743!3.13e-23!73;UBERON:0000073!4.45e-22!75;UBERON:0001016!4.45e-22!75;UBERON:0002020!1.61e-16!34;UBERON:0002384!6.23e-15!46;UBERON:0002791!4.90e-14!29;UBERON:0003528!4.90e-14!29;UBERON:0001893!4.90e-14!29;UBERON:0004121!8.65e-12!102;UBERON:0000924!8.65e-12!102;UBERON:0006601!8.65e-12!102;UBERON:0001049!9.33e-12!52;UBERON:0005068!9.33e-12!52;UBERON:0006241!9.33e-12!52;UBERON:0007135!9.33e-12!52;UBERON:0000956!1.05e-11!21;UBERON:0001869!1.05e-11!21;UBERON:0000203!1.05e-11!21;UBERON:0002616!3.96e-11!49;UBERON:0002619!7.08e-11!17;UBERON:0000955!1.10e-10!50;UBERON:0006238!1.10e-10!50;UBERON:0003080!7.17e-10!40;UBERON:0002021!1.01e-09!10;UBERON:0000411!1.01e-09!10;UBERON:0001950!1.01e-09!10;UBERON:0002780!1.21e-09!39;UBERON:0001890!1.21e-09!39;UBERON:0006240!1.21e-09!39;UBERON:0002371!6.86e-09!16;UBERON:0002346!4.17e-08!71;UBERON:0003075!4.17e-08!71;UBERON:0007284!4.17e-08!71;UBERON:0002410!2.20e-07!9;UBERON:0003056!5.86e-07!49;UBERON:0000033!8.21e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-28,73;UBERON:0001016,2.13e-27,75;UBERON:0002020,1.14e-20,34;UBERON:0003528,5.39e-20,29;UBERON:0002791,5.39e-20,29;UBERON:0001893,5.39e-20,29;UBERON:0004121,6.71e-19,95;UBERON:0000924,6.71e-19,95;UBERON:0006601,6.71e-19,95;UBERON:0000073,2.06e-16,54;UBERON:0002619,5.09e-16,17;UBERON:0000956,5.73e-16,21;UBERON:0001869,5.73e-16,21;UBERON:0000203,5.73e-16,21;UBERON:0002021,1.03e-13,10;UBERON:0000411,1.03e-13,10;UBERON:0001950,1.03e-13,10;UBERON:0001049,2.66e-13,52;UBERON:0005068,2.66e-13,52;UBERON:0006241,2.66e-13,52;UBERON:0007135,2.66e-13,52;UBERON:0002780,4.13e-13,39;UBERON:0001890,4.13e-13,39;UBERON:0006240,4.13e-13,39;UBERON:0003080,1.28e-12,40;UBERON:0002616,1.52e-12,46;UBERON:0002346,3.57e-12,64;UBERON:0003075,3.57e-12,64;UBERON:0007284,3.57e-12,64;UBERON:0000955,3.99e-12,47;UBERON:0006238,3.99e-12,47;UBERON:0002410,3.06e-10,9;UBERON:0010371,1.22e-09,73;UBERON:0003056,4.01e-09,49;UBERON:0000010,4.99e-08,11;UBERON:0010314,5.76e-08,92;UBERON:0002384,4.76e-07,46;UBERON:0011216,6.79e-07,194 | |||
|phase1_expression=0,0,0.454999239389536,0,1.00179145989269,0,0.233612640595526,1.16210991097419,1.40788722151667,1.40438715793196,0.171217968225505,0.239316476986009,0.513602189793617,0.34968160967599,3.66420737997229,0.607425802169478,4.19737126876888,0.473193248037357,0.822686601634433,3.81950686618227,0,0.0992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,18.4158895303293,14.7615549020297,31.6963362030877,0,0,0,0,0,0,0,0.683045484958446,0,0,0.101376931219515,0,7.82391344348039,2.18025156380447,1.5378032791413,3.30530828426282,1.81982348112971,4.31257693094915,0,0,0.672187598284928,1.28629718017973,2.57880095944881,4.12537673821954,3.03474691289397,10.5798195854407,7.60597684207415,0.677689064138264,9.78224275722253,0.449949858640699,14.8329954385046,13.4991221839759,1.19840044207362,0.768436610643109,0.414758449233911,5.53524347159932,2.3135745748652,0.571301968807607,1.98781686856452,2.20483438586917,2.97120960156533,10.1114066527102,23.1243350098716,2.80912143787413,2.76491759861238,5.40733779693795,2.8361169516747,1.04182674111352,2.79182999001381,2.8138130501584,3.81995619442025,1.76777151284201,0.569486723196412,1.1183966749518,0,0,0.289864488701678,0,1.3599426674155,3.77792234146472,5.19821133958135,4.03224198387602,0,0,1.81850203222008,0.70667914902068,0,0,0,0,0.432982082022428,1.26679932737549,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,7.53956419696361,2.71952841909355,0,0,0,0,0,0,1.57754109708128,1.56175497718655,4.30846795465598,3.34556317133573,4.90157082981267,2.54768877709949,2.83367491172426,2.04579100537918,3.95287777946523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.887943813496259,0.179427713218951,0.503653849092235,0,0,0,0,0,3.3885110557024,5.06357760157895,6.30185064783336,1.89038500578056,6.85082519770642,10.5755145634558,4.72515750162264,5.85417564191487,6.79713613476307,5.69536342927002,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p1@ENSMUST00000122520 | |||
}} |
Latest revision as of 22:21, 3 August 2015
Short description: | p1@ENSMUST00000122520 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000122520_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000122520_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.98e-31 | 43 |
ectodermal cell | 5.29e-30 | 44 |
neurectodermal cell | 5.29e-30 | 44 |
somatic stem cell | 3.21e-28 | 91 |
multi fate stem cell | 3.21e-28 | 91 |
neuron | 9.37e-27 | 33 |
neuronal stem cell | 9.37e-27 | 33 |
neuroblast | 9.37e-27 | 33 |
electrically signaling cell | 9.37e-27 | 33 |
electrically responsive cell | 9.87e-27 | 39 |
electrically active cell | 9.87e-27 | 39 |
embryonic cell | 1.09e-26 | 70 |
stem cell | 1.37e-25 | 97 |
CNS neuron (sensu Vertebrata) | 1.29e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-18 | 23 |
motile cell | 2.00e-10 | 54 |
autonomic neuron | 3.06e-10 | 9 |
myeloid lineage restricted progenitor cell | 1.01e-07 | 13 |
oligodendrocyte | 1.85e-07 | 6 |
macroglial cell | 1.85e-07 | 6 |
astrocyte | 1.85e-07 | 6 |
connective tissue cell | 4.76e-07 | 46 |
mesenchymal cell | 4.76e-07 | 46 |
oligodendrocyte precursor cell | 5.86e-07 | 8 |