FFCP PHASE1:Mm9::chr14:122850352..122850372,-: Difference between revisions
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{{FFCP|EntrezGene=328479|HGNC=|MCL_coexpression_id=2887|UniProt=|association_with_transcript=0bp_to_NR_033326,uc007vba.2,uc011zqj.1_5end|description=CAGE_peak_2_at_Gm5089_5end|id=chr14:122850352..122850372,-|ontology_enrichment_celltype=CL:0000221!1.41e-12!44;CL:0000133!1.41e-12!44;CL:0002319!2.88e-12!43;CL:0000117!7.10e-10!23;CL:0000337!7.10e-10!23;CL:0000055!3.43e-09!50;CL:0002453!7.94e-09!8;CL:0000333!1.12e-07!10;CL:0000095!1.12e-07!10;CL:0000243!1.12e-07!10;CL:0000123!1.12e-07!10;CL:0000125!1.12e-07!10;CL:0000030!1.12e-07!10;CL:0000339!1.12e-07!10;CL:0000128!5.72e-07!6;CL:0000126!5.72e-07!6;CL:0000127!5.72e-07!6;CL:0000540!7.66e-07!33;CL:0000047!7.66e-07!33;CL:0000031!7.66e-07!33;CL:0000404!7.66e-07!33|ontology_enrichment_celltype_v019_2=CL:0002319,1.04e-15,43;CL:0000221,3.11e-15,44;CL:0000133,3.11e-15,44;CL:0002453,2.39e-13,8;CL:0000117,8.34e-11,23;CL:0000337,8.34e-11,23;CL:0000333,2.00e-10,10;CL:0000095,2.00e-10,10;CL:0000243,2.00e-10,10;CL:0000123,2.00e-10,10;CL:0000125,2.00e-10,10;CL:0000030,2.00e-10,10;CL:0000339,2.00e-10,10;CL:0000128,1.19e-09,6;CL:0000126,1.19e-09,6;CL:0000127,1.19e-09,6;CL:0000540,3.77e-08,33;CL:0000047,3.77e-08,33;CL:0000031,3.77e-08,33;CL:0000404,3.77e-08,33;CL:0002321,1.03e-07,70;CL:0002613,2.90e-07,3;CL:0002612,4.24e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.85e-31!73;UBERON:0005743!6.85e-31!73;UBERON:0000073!1.62e-30!75;UBERON:0001016!1.62e-30!75;UBERON:0001049!5.46e-28!52;UBERON:0005068!5.46e-28!52;UBERON:0006241!5.46e-28!52;UBERON:0007135!5.46e-28!52;UBERON:0000033!1.06e-25!63;UBERON:0000955!7.09e-25!50;UBERON:0006238!7.09e-25!50;UBERON:0002616!1.65e-24!49;UBERON:0004121!4.91e-24!102;UBERON:0000924!4.91e-24!102;UBERON:0006601!4.91e-24!102;UBERON:0002346!3.86e-22!71;UBERON:0003075!3.86e-22!71;UBERON:0007284!3.86e-22!71;UBERON:0003056!4.93e-19!49;UBERON:0003080!3.23e-18!40;UBERON:0002020!3.67e-18!34;UBERON:0002780!8.52e-18!39;UBERON:0001890!8.52e-18!39;UBERON:0006240!8.52e-18!39;UBERON:0000153!6.09e-16!94;UBERON:0007811!3.06e-14!86;UBERON:0002791!5.68e-14!29;UBERON:0003528!5.68e-14!29;UBERON:0001893!5.68e-14!29;UBERON:0003076!1.38e-10!12;UBERON:0003057!1.38e-10!12;UBERON:0000956!8.43e-09!21;UBERON:0001869!8.43e-09!21;UBERON:0000203!8.43e-09!21;UBERON:0002619!3.73e-08!17;UBERON:0002021!4.49e-07!10;UBERON:0000411!4.49e-07!10;UBERON:0001950!4.49e-07!10;UBERON:0002420!9.94e-07!8;UBERON:0007245!9.94e-07!8;UBERON:0010009!9.94e-07!8;UBERON:0010011!9.94e-07!8;UBERON:0000454!9.94e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.19e-32,73;UBERON:0001016,7.45e-31,75;UBERON:0001049,6.36e-27,52;UBERON:0005068,6.36e-27,52;UBERON:0006241,6.36e-27,52;UBERON:0007135,6.36e-27,52;UBERON:0000073,8.95e-26,54;UBERON:0004121,4.24e-24,95;UBERON:0000924,4.24e-24,95;UBERON:0006601,4.24e-24,95;UBERON:0002346,3.11e-22,64;UBERON:0003075,3.11e-22,64;UBERON:0007284,3.11e-22,64;UBERON:0002020,5.79e-22,34;UBERON:0010371,2.47e-20,73;UBERON:0002616,1.66e-18,46;UBERON:0000955,5.48e-18,47;UBERON:0006238,5.48e-18,47;UBERON:0002780,3.45e-16,39;UBERON:0001890,3.45e-16,39;UBERON:0006240,3.45e-16,39;UBERON:0003080,1.17e-15,40;UBERON:0003528,1.00e-14,29;UBERON:0002791,1.00e-14,29;UBERON:0001893,1.00e-14,29;UBERON:0010314,1.43e-14,92;UBERON:0003056,2.60e-13,49;UBERON:0003076,6.24e-13,12;UBERON:0003057,6.24e-13,12;UBERON:0002619,1.08e-12,17;UBERON:0002240,1.11e-11,6;UBERON:0005174,1.11e-11,6;UBERON:0001137,1.11e-11,6;UBERON:0000956,1.36e-11,21;UBERON:0001869,1.36e-11,21;UBERON:0000203,1.36e-11,21;UBERON:0001948,4.38e-10,5;UBERON:0002315,4.38e-10,5;UBERON:0002021,8.34e-09,10;UBERON:0000411,8.34e-09,10;UBERON:0001950,8.34e-09,10;UBERON:0000025,1.94e-08,114;UBERON:0004111,2.49e-08,122;UBERON:0002257,4.24e-07,3|phase1_expression=7.52699581392532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,0.65407546914134,14.0599156950062,10.1103547518627,4.33957907038624,1.43752564364972,0,0,0,0,0,0,2.63011399117477,4.23192783417626,0,0.677689064138264,3.55717918444456,0,0,0,2.09720077362883,3.45796474789399,0.414758449233911,0.405017814995072,0,1.14260393761521,1.32521124570968,0,0,0,2.20231761998777,0.510749352340751,0.46081959976873,3.16527090552465,7.22752384459036,1.56274011167028,0.558365998002762,0.56276261003168,1.98637722109853,2.65165726926301,1.99320353118744,2.60959224155421,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80615036115011,4.39838084308256,0,0,0,0,0.449371918214468,0.457500602818626,0.502617408451458,1.04294592115366,1.79000820131231,0,1.94689515681309,0,0,0,0.210441855886474,0.390361328888111,0,0.540186389416048,0,0.408218994907967,1.66547836370305,0.655912071918102,0,0.646703978798527,0.189106080167819,0.527853372491847,0.219195732427575,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,2.6755199218614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,1.03486947026204,0.857348140126369,0.886701168211368,0.891844088010353,1.81003922662333,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,2.29158205375759,1.20297227640581,1.37016503954128,0,2.02506750069542,0.900642406448441,4.07828168085784,1.03552062350364,1.03787347584177,0.798049746802062,1.19513524027894,0.729320151204882,0.419226325255965,0,0.888986911206461,0.824140228955577,0.320919209591815,0.252697211763798,0,0.754505365544305,0.842773567228942,0.512201219238954,0.402048282689293,0,0.463537303779422,0,0.412085900803307,0.588795680537589,0,1.06485483695602,0.476872379894642,0.726732083161643,0.846984423737976,0.592302255241736,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,0.593175090620871,0.29551344712669,1.22769312950907,0.77468420592983,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0|short_description=p2@Gm5089}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:328479 | |||
|HGNC= | |||
|MCL_coexpression_id=2887 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_033326,uc007vba.2,uc011zqj.1_5end | |||
|cluster_id=chr14:122850352..122850372,- | |||
|description=CAGE_peak_2_at_Gm5089_5end | |||
|id=chr14:122850352..122850372,- | |||
|ontology_enrichment_celltype=CL:0000221!1.41e-12!44;CL:0000133!1.41e-12!44;CL:0002319!2.88e-12!43;CL:0000117!7.10e-10!23;CL:0000337!7.10e-10!23;CL:0000055!3.43e-09!50;CL:0002453!7.94e-09!8;CL:0000333!1.12e-07!10;CL:0000095!1.12e-07!10;CL:0000243!1.12e-07!10;CL:0000123!1.12e-07!10;CL:0000125!1.12e-07!10;CL:0000030!1.12e-07!10;CL:0000339!1.12e-07!10;CL:0000128!5.72e-07!6;CL:0000126!5.72e-07!6;CL:0000127!5.72e-07!6;CL:0000540!7.66e-07!33;CL:0000047!7.66e-07!33;CL:0000031!7.66e-07!33;CL:0000404!7.66e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.04e-15,43;CL:0000221,3.11e-15,44;CL:0000133,3.11e-15,44;CL:0002453,2.39e-13,8;CL:0000117,8.34e-11,23;CL:0000337,8.34e-11,23;CL:0000333,2.00e-10,10;CL:0000095,2.00e-10,10;CL:0000243,2.00e-10,10;CL:0000123,2.00e-10,10;CL:0000125,2.00e-10,10;CL:0000030,2.00e-10,10;CL:0000339,2.00e-10,10;CL:0000128,1.19e-09,6;CL:0000126,1.19e-09,6;CL:0000127,1.19e-09,6;CL:0000540,3.77e-08,33;CL:0000047,3.77e-08,33;CL:0000031,3.77e-08,33;CL:0000404,3.77e-08,33;CL:0002321,1.03e-07,70;CL:0002613,2.90e-07,3;CL:0002612,4.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.85e-31!73;UBERON:0005743!6.85e-31!73;UBERON:0000073!1.62e-30!75;UBERON:0001016!1.62e-30!75;UBERON:0001049!5.46e-28!52;UBERON:0005068!5.46e-28!52;UBERON:0006241!5.46e-28!52;UBERON:0007135!5.46e-28!52;UBERON:0000033!1.06e-25!63;UBERON:0000955!7.09e-25!50;UBERON:0006238!7.09e-25!50;UBERON:0002616!1.65e-24!49;UBERON:0004121!4.91e-24!102;UBERON:0000924!4.91e-24!102;UBERON:0006601!4.91e-24!102;UBERON:0002346!3.86e-22!71;UBERON:0003075!3.86e-22!71;UBERON:0007284!3.86e-22!71;UBERON:0003056!4.93e-19!49;UBERON:0003080!3.23e-18!40;UBERON:0002020!3.67e-18!34;UBERON:0002780!8.52e-18!39;UBERON:0001890!8.52e-18!39;UBERON:0006240!8.52e-18!39;UBERON:0000153!6.09e-16!94;UBERON:0007811!3.06e-14!86;UBERON:0002791!5.68e-14!29;UBERON:0003528!5.68e-14!29;UBERON:0001893!5.68e-14!29;UBERON:0003076!1.38e-10!12;UBERON:0003057!1.38e-10!12;UBERON:0000956!8.43e-09!21;UBERON:0001869!8.43e-09!21;UBERON:0000203!8.43e-09!21;UBERON:0002619!3.73e-08!17;UBERON:0002021!4.49e-07!10;UBERON:0000411!4.49e-07!10;UBERON:0001950!4.49e-07!10;UBERON:0002420!9.94e-07!8;UBERON:0007245!9.94e-07!8;UBERON:0010009!9.94e-07!8;UBERON:0010011!9.94e-07!8;UBERON:0000454!9.94e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.19e-32,73;UBERON:0001016,7.45e-31,75;UBERON:0001049,6.36e-27,52;UBERON:0005068,6.36e-27,52;UBERON:0006241,6.36e-27,52;UBERON:0007135,6.36e-27,52;UBERON:0000073,8.95e-26,54;UBERON:0004121,4.24e-24,95;UBERON:0000924,4.24e-24,95;UBERON:0006601,4.24e-24,95;UBERON:0002346,3.11e-22,64;UBERON:0003075,3.11e-22,64;UBERON:0007284,3.11e-22,64;UBERON:0002020,5.79e-22,34;UBERON:0010371,2.47e-20,73;UBERON:0002616,1.66e-18,46;UBERON:0000955,5.48e-18,47;UBERON:0006238,5.48e-18,47;UBERON:0002780,3.45e-16,39;UBERON:0001890,3.45e-16,39;UBERON:0006240,3.45e-16,39;UBERON:0003080,1.17e-15,40;UBERON:0003528,1.00e-14,29;UBERON:0002791,1.00e-14,29;UBERON:0001893,1.00e-14,29;UBERON:0010314,1.43e-14,92;UBERON:0003056,2.60e-13,49;UBERON:0003076,6.24e-13,12;UBERON:0003057,6.24e-13,12;UBERON:0002619,1.08e-12,17;UBERON:0002240,1.11e-11,6;UBERON:0005174,1.11e-11,6;UBERON:0001137,1.11e-11,6;UBERON:0000956,1.36e-11,21;UBERON:0001869,1.36e-11,21;UBERON:0000203,1.36e-11,21;UBERON:0001948,4.38e-10,5;UBERON:0002315,4.38e-10,5;UBERON:0002021,8.34e-09,10;UBERON:0000411,8.34e-09,10;UBERON:0001950,8.34e-09,10;UBERON:0000025,1.94e-08,114;UBERON:0004111,2.49e-08,122;UBERON:0002257,4.24e-07,3 | |||
|phase1_expression=7.52699581392532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,0.65407546914134,14.0599156950062,10.1103547518627,4.33957907038624,1.43752564364972,0,0,0,0,0,0,2.63011399117477,4.23192783417626,0,0.677689064138264,3.55717918444456,0,0,0,2.09720077362883,3.45796474789399,0.414758449233911,0.405017814995072,0,1.14260393761521,1.32521124570968,0,0,0,2.20231761998777,0.510749352340751,0.46081959976873,3.16527090552465,7.22752384459036,1.56274011167028,0.558365998002762,0.56276261003168,1.98637722109853,2.65165726926301,1.99320353118744,2.60959224155421,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80615036115011,4.39838084308256,0,0,0,0,0.449371918214468,0.457500602818626,0.502617408451458,1.04294592115366,1.79000820131231,0,1.94689515681309,0,0,0,0.210441855886474,0.390361328888111,0,0.540186389416048,0,0.408218994907967,1.66547836370305,0.655912071918102,0,0.646703978798527,0.189106080167819,0.527853372491847,0.219195732427575,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,2.6755199218614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,1.03486947026204,0.857348140126369,0.886701168211368,0.891844088010353,1.81003922662333,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,2.29158205375759,1.20297227640581,1.37016503954128,0,2.02506750069542,0.900642406448441,4.07828168085784,1.03552062350364,1.03787347584177,0.798049746802062,1.19513524027894,0.729320151204882,0.419226325255965,0,0.888986911206461,0.824140228955577,0.320919209591815,0.252697211763798,0,0.754505365544305,0.842773567228942,0.512201219238954,0.402048282689293,0,0.463537303779422,0,0.412085900803307,0.588795680537589,0,1.06485483695602,0.476872379894642,0.726732083161643,0.846984423737976,0.592302255241736,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,0.593175090620871,0.29551344712669,1.22769312950907,0.77468420592983,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p2@Gm5089 | |||
}} |
Revision as of 00:47, 4 August 2015
Short description: | p2@Gm5089 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm5089_5end |
Coexpression cluster: | MCL_coexpression_mm9:2887 |
Association with transcript: | 0bp_to_NR_033326, uc007vba.2, uc011zqj.1_5end |
EntrezGene: | 328479 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.04e-15 | 43 |
ectodermal cell | 3.11e-15 | 44 |
neurectodermal cell | 3.11e-15 | 44 |
oligodendrocyte precursor cell | 2.39e-13 | 8 |
CNS neuron (sensu Vertebrata) | 8.34e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.34e-11 | 23 |
migratory neural crest cell | 2.00e-10 | 10 |
neuron associated cell | 2.00e-10 | 10 |
glial cell (sensu Vertebrata) | 2.00e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 2.00e-10 | 10 |
glial cell | 2.00e-10 | 10 |
glioblast | 2.00e-10 | 10 |
glioblast (sensu Vertebrata) | 2.00e-10 | 10 |
oligodendrocyte | 1.19e-09 | 6 |
macroglial cell | 1.19e-09 | 6 |
astrocyte | 1.19e-09 | 6 |
neuron | 3.77e-08 | 33 |
neuronal stem cell | 3.77e-08 | 33 |
neuroblast | 3.77e-08 | 33 |
electrically signaling cell | 3.77e-08 | 33 |
embryonic cell | 1.03e-07 | 70 |
striatum neuron | 2.90e-07 | 3 |
neuron of the ventral spinal cord | 4.24e-07 | 3 |