FFCP PHASE1:Mm9::chr10:32609480..32609533,-: Difference between revisions
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{{FFCP|EntrezGene=432450|HGNC=|MCL_coexpression_id=1|UniProt=Q4PNJ2|association_with_transcript=187bp_to_NM_001013411,NM_001025286,uc007etw.2,uc007ety.2_5end|description=CAGE_peak_2_at_Nkain2_5end|id=chr10:32609480..32609533,-|ontology_enrichment_celltype=CL:0000540!2.40e-16!33;CL:0000047!2.40e-16!33;CL:0000031!2.40e-16!33;CL:0000404!2.40e-16!33;CL:0000393!6.38e-15!39;CL:0000211!6.38e-15!39;CL:0000221!2.57e-14!44;CL:0000133!2.57e-14!44;CL:0002319!1.26e-13!43;CL:0000055!3.18e-12!50;CL:0000117!1.97e-10!23;CL:0000337!1.97e-10!23|ontology_enrichment_celltype_v019_2=CL:0000540,2.14e-23,33;CL:0000047,2.14e-23,33;CL:0000031,2.14e-23,33;CL:0000404,2.14e-23,33;CL:0000221,1.26e-21,44;CL:0000133,1.26e-21,44;CL:0002319,1.48e-20,43;CL:0000393,2.89e-19,39;CL:0000211,2.89e-19,39;CL:0000117,2.07e-14,23;CL:0000337,2.07e-14,23;CL:0002321,5.48e-10,70;CL:0000107,2.40e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.50e-31!75;UBERON:0001016!3.50e-31!75;UBERON:0001017!4.64e-30!73;UBERON:0005743!4.64e-30!73;UBERON:0004121!1.73e-27!102;UBERON:0000924!1.73e-27!102;UBERON:0006601!1.73e-27!102;UBERON:0001049!2.35e-21!52;UBERON:0005068!2.35e-21!52;UBERON:0006241!2.35e-21!52;UBERON:0007135!2.35e-21!52;UBERON:0002346!5.79e-21!71;UBERON:0003075!5.79e-21!71;UBERON:0007284!5.79e-21!71;UBERON:0000955!1.43e-20!50;UBERON:0006238!1.43e-20!50;UBERON:0000033!5.16e-20!63;UBERON:0002616!8.71e-20!49;UBERON:0002020!6.53e-16!34;UBERON:0003080!1.21e-15!40;UBERON:0002780!5.49e-15!39;UBERON:0001890!5.49e-15!39;UBERON:0006240!5.49e-15!39;UBERON:0003056!3.87e-14!49;UBERON:0002791!3.00e-13!29;UBERON:0003528!3.00e-13!29;UBERON:0001893!3.00e-13!29;UBERON:0000956!3.91e-09!21;UBERON:0001869!3.91e-09!21;UBERON:0000203!3.91e-09!21;UBERON:0007811!9.03e-09!86;UBERON:0000153!2.92e-08!94;UBERON:0002021!7.20e-08!10;UBERON:0000411!7.20e-08!10;UBERON:0001950!7.20e-08!10;UBERON:0000010!1.81e-07!11;UBERON:0002619!3.07e-07!17;UBERON:0000468!3.71e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.00e-42,75;UBERON:0001017,1.90e-40,73;UBERON:0004121,5.17e-34,95;UBERON:0000924,5.17e-34,95;UBERON:0006601,5.17e-34,95;UBERON:0000073,6.07e-28,54;UBERON:0001049,4.60e-26,52;UBERON:0005068,4.60e-26,52;UBERON:0006241,4.60e-26,52;UBERON:0007135,4.60e-26,52;UBERON:0002346,1.31e-24,64;UBERON:0003075,1.31e-24,64;UBERON:0007284,1.31e-24,64;UBERON:0010371,1.97e-22,73;UBERON:0002020,2.88e-22,34;UBERON:0000955,5.98e-22,47;UBERON:0006238,5.98e-22,47;UBERON:0002616,7.25e-21,46;UBERON:0003528,3.14e-18,29;UBERON:0002791,3.14e-18,29;UBERON:0001893,3.14e-18,29;UBERON:0003080,2.45e-17,40;UBERON:0002780,2.04e-16,39;UBERON:0001890,2.04e-16,39;UBERON:0006240,2.04e-16,39;UBERON:0010314,1.48e-14,92;UBERON:0003056,5.29e-14,49;UBERON:0000956,5.07e-12,21;UBERON:0001869,5.07e-12,21;UBERON:0000203,5.07e-12,21;UBERON:0002021,3.32e-11,10;UBERON:0000411,3.32e-11,10;UBERON:0001950,3.32e-11,10;UBERON:0000010,1.35e-10,11;UBERON:0003076,1.66e-09,12;UBERON:0003057,1.66e-09,12;UBERON:0002410,2.40e-09,9;UBERON:0002619,3.49e-09,17;UBERON:0002420,1.45e-07,8;UBERON:0007245,1.45e-07,8;UBERON:0010009,1.45e-07,8;UBERON:0010011,1.45e-07,8;UBERON:0000454,1.45e-07,8;UBERON:0011216,4.34e-07,194|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.709638518536602,0.550640256485045,0,1.52617609466313,0.439372365468944,0,0,0,0,0,0,0.514518872071894,0,0,1.61853168687678,3.70293685490423,1.26766280701236,0,0,0,0,0,0,1.53687322128622,3.94020526772215,2.16009501330705,1.68259969081106,5.14171771926846,4.19650227808066,0.857435594504678,2.39613677545591,0,8.8092704799511,7.15049093277051,10.752457327937,1.18697658957174,3.11057988248193,2.6045668527838,4.18774498502071,7.87867654044352,9.32069311438542,3.24091444021034,6.54909731675874,3.54158947068071,1.96888102666279,3.40072020480535,0.289864488701678,0,0,0,0,0,0,0,0,0,12.2533775205712,0,0,0,0,0,0,0,0,0.148442139064825,0,0.913396434936424,0.461230994512117,0.452167921657868,0.940709657085638,0.125666591329675,0,0,0,0.485300549842228,0,0,0,4.39171195517321,4.60782754989601,0,0,0,0,9.13722900369418,14.1825186873774,4.39790232395025,10.6032835317289,8.95004100656157,10.5971902725376,12.4925772562173,0.509196819251581,0,0.505445516867349,0.420883711772948,0,0,0,1.20563854268572,0.95251098811859,0.2562274405697,0.655912071918102,1.03481348295606,0,0.189106080167819,0.351902248327898,0,1.39023624612799,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0.268273401399619,0,0,0,0.243206428637567,0.146199987425332,0,0,12.1968170167194,1.64647379806855,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.605050573870028,0.667134131534611,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.210407459670956,0,0,0,0,0.296452627087149,0.3336902114321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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:432450 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q4PNJ2 | |||
|association_with_transcript=187bp_to_NM_001013411,NM_001025286,uc007etw.2,uc007ety.2_5end | |||
|cluster_id=chr10:32609480..32609533,- | |||
|description=CAGE_peak_2_at_Nkain2_5end | |||
|id=chr10:32609480..32609533,- | |||
|ontology_enrichment_celltype=CL:0000540!2.40e-16!33;CL:0000047!2.40e-16!33;CL:0000031!2.40e-16!33;CL:0000404!2.40e-16!33;CL:0000393!6.38e-15!39;CL:0000211!6.38e-15!39;CL:0000221!2.57e-14!44;CL:0000133!2.57e-14!44;CL:0002319!1.26e-13!43;CL:0000055!3.18e-12!50;CL:0000117!1.97e-10!23;CL:0000337!1.97e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.14e-23,33;CL:0000047,2.14e-23,33;CL:0000031,2.14e-23,33;CL:0000404,2.14e-23,33;CL:0000221,1.26e-21,44;CL:0000133,1.26e-21,44;CL:0002319,1.48e-20,43;CL:0000393,2.89e-19,39;CL:0000211,2.89e-19,39;CL:0000117,2.07e-14,23;CL:0000337,2.07e-14,23;CL:0002321,5.48e-10,70;CL:0000107,2.40e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.50e-31!75;UBERON:0001016!3.50e-31!75;UBERON:0001017!4.64e-30!73;UBERON:0005743!4.64e-30!73;UBERON:0004121!1.73e-27!102;UBERON:0000924!1.73e-27!102;UBERON:0006601!1.73e-27!102;UBERON:0001049!2.35e-21!52;UBERON:0005068!2.35e-21!52;UBERON:0006241!2.35e-21!52;UBERON:0007135!2.35e-21!52;UBERON:0002346!5.79e-21!71;UBERON:0003075!5.79e-21!71;UBERON:0007284!5.79e-21!71;UBERON:0000955!1.43e-20!50;UBERON:0006238!1.43e-20!50;UBERON:0000033!5.16e-20!63;UBERON:0002616!8.71e-20!49;UBERON:0002020!6.53e-16!34;UBERON:0003080!1.21e-15!40;UBERON:0002780!5.49e-15!39;UBERON:0001890!5.49e-15!39;UBERON:0006240!5.49e-15!39;UBERON:0003056!3.87e-14!49;UBERON:0002791!3.00e-13!29;UBERON:0003528!3.00e-13!29;UBERON:0001893!3.00e-13!29;UBERON:0000956!3.91e-09!21;UBERON:0001869!3.91e-09!21;UBERON:0000203!3.91e-09!21;UBERON:0007811!9.03e-09!86;UBERON:0000153!2.92e-08!94;UBERON:0002021!7.20e-08!10;UBERON:0000411!7.20e-08!10;UBERON:0001950!7.20e-08!10;UBERON:0000010!1.81e-07!11;UBERON:0002619!3.07e-07!17;UBERON:0000468!3.71e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.00e-42,75;UBERON:0001017,1.90e-40,73;UBERON:0004121,5.17e-34,95;UBERON:0000924,5.17e-34,95;UBERON:0006601,5.17e-34,95;UBERON:0000073,6.07e-28,54;UBERON:0001049,4.60e-26,52;UBERON:0005068,4.60e-26,52;UBERON:0006241,4.60e-26,52;UBERON:0007135,4.60e-26,52;UBERON:0002346,1.31e-24,64;UBERON:0003075,1.31e-24,64;UBERON:0007284,1.31e-24,64;UBERON:0010371,1.97e-22,73;UBERON:0002020,2.88e-22,34;UBERON:0000955,5.98e-22,47;UBERON:0006238,5.98e-22,47;UBERON:0002616,7.25e-21,46;UBERON:0003528,3.14e-18,29;UBERON:0002791,3.14e-18,29;UBERON:0001893,3.14e-18,29;UBERON:0003080,2.45e-17,40;UBERON:0002780,2.04e-16,39;UBERON:0001890,2.04e-16,39;UBERON:0006240,2.04e-16,39;UBERON:0010314,1.48e-14,92;UBERON:0003056,5.29e-14,49;UBERON:0000956,5.07e-12,21;UBERON:0001869,5.07e-12,21;UBERON:0000203,5.07e-12,21;UBERON:0002021,3.32e-11,10;UBERON:0000411,3.32e-11,10;UBERON:0001950,3.32e-11,10;UBERON:0000010,1.35e-10,11;UBERON:0003076,1.66e-09,12;UBERON:0003057,1.66e-09,12;UBERON:0002410,2.40e-09,9;UBERON:0002619,3.49e-09,17;UBERON:0002420,1.45e-07,8;UBERON:0007245,1.45e-07,8;UBERON:0010009,1.45e-07,8;UBERON:0010011,1.45e-07,8;UBERON:0000454,1.45e-07,8;UBERON:0011216,4.34e-07,194 | |||
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|short_description=p2@Nkain2 | |||
}} |
Revision as of 07:40, 4 August 2015
Short description: | p2@Nkain2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nkain2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 187bp_to_NM_001013411, NM_001025286, uc007etw.2, uc007ety.2_5end |
EntrezGene: | 432450 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.14e-23 | 33 |
neuronal stem cell | 2.14e-23 | 33 |
neuroblast | 2.14e-23 | 33 |
electrically signaling cell | 2.14e-23 | 33 |
ectodermal cell | 1.26e-21 | 44 |
neurectodermal cell | 1.26e-21 | 44 |
neural cell | 1.48e-20 | 43 |
electrically responsive cell | 2.89e-19 | 39 |
electrically active cell | 2.89e-19 | 39 |
CNS neuron (sensu Vertebrata) | 2.07e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.07e-14 | 23 |
embryonic cell | 5.48e-10 | 70 |
autonomic neuron | 2.40e-09 | 9 |