FFCP PHASE1:Mm9::chr6:103460868..103460892,+: Difference between revisions
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{{FFCP|EntrezGene=12661|HGNC=|MCL_coexpression_id=1203|UniProt=E9QMU6,A2RRK1,E9QL95,P70232|association_with_transcript=0bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end|description=CAGE_peak_9_at_Chl1_5end|id=chr6:103460868..103460892,+|ontology_enrichment_celltype=CL:0000540!1.74e-22!33;CL:0000047!1.74e-22!33;CL:0000031!1.74e-22!33;CL:0000404!1.74e-22!33;CL:0000221!1.70e-19!44;CL:0000133!1.70e-19!44;CL:0002319!1.92e-19!43;CL:0000117!1.55e-16!23;CL:0000337!1.55e-16!23;CL:0000393!1.74e-16!39;CL:0000211!1.74e-16!39;CL:0000055!2.99e-14!50;CL:0000107!3.08e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,9.33e-31,33;CL:0000047,9.33e-31,33;CL:0000031,9.33e-31,33;CL:0000404,9.33e-31,33;CL:0000393,3.36e-24,39;CL:0000211,3.36e-24,39;CL:0000117,3.79e-23,23;CL:0000337,3.79e-23,23;CL:0002319,8.30e-23,43;CL:0000221,5.11e-22,44;CL:0000133,5.11e-22,44;CL:0000107,9.54e-10,9;CL:0002321,1.01e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.00e-31!75;UBERON:0001016!2.00e-31!75;UBERON:0001017!3.40e-30!73;UBERON:0005743!3.40e-30!73;UBERON:0004121!1.86e-26!102;UBERON:0000924!1.86e-26!102;UBERON:0006601!1.86e-26!102;UBERON:0002020!5.47e-21!34;UBERON:0002346!1.20e-19!71;UBERON:0003075!1.20e-19!71;UBERON:0007284!1.20e-19!71;UBERON:0001049!1.21e-19!52;UBERON:0005068!1.21e-19!52;UBERON:0006241!1.21e-19!52;UBERON:0007135!1.21e-19!52;UBERON:0000955!1.21e-17!50;UBERON:0006238!1.21e-17!50;UBERON:0002616!2.35e-17!49;UBERON:0002791!4.23e-17!29;UBERON:0003528!4.23e-17!29;UBERON:0001893!4.23e-17!29;UBERON:0000033!2.64e-16!63;UBERON:0003080!9.03e-15!40;UBERON:0002780!4.66e-14!39;UBERON:0001890!4.66e-14!39;UBERON:0006240!4.66e-14!39;UBERON:0003056!1.39e-13!49;UBERON:0000956!9.44e-12!21;UBERON:0001869!9.44e-12!21;UBERON:0000203!9.44e-12!21;UBERON:0007811!2.52e-11!86;UBERON:0000153!4.94e-11!94;UBERON:0002619!2.15e-09!17;UBERON:0000010!3.68e-08!11;UBERON:0002021!1.30e-07!10;UBERON:0000411!1.30e-07!10;UBERON:0001950!1.30e-07!10;UBERON:0002410!3.08e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.13e-37,75;UBERON:0001017,7.19e-37,73;UBERON:0002020,6.95e-29,34;UBERON:0000073,1.57e-28,54;UBERON:0001049,1.79e-26,52;UBERON:0005068,1.79e-26,52;UBERON:0006241,1.79e-26,52;UBERON:0007135,1.79e-26,52;UBERON:0004121,1.52e-25,95;UBERON:0000924,1.52e-25,95;UBERON:0006601,1.52e-25,95;UBERON:0003528,2.72e-23,29;UBERON:0002791,2.72e-23,29;UBERON:0001893,2.72e-23,29;UBERON:0002346,9.49e-23,64;UBERON:0003075,9.49e-23,64;UBERON:0007284,9.49e-23,64;UBERON:0002616,1.31e-20,46;UBERON:0000955,6.39e-20,47;UBERON:0006238,6.39e-20,47;UBERON:0003080,6.36e-19,40;UBERON:0010371,3.68e-18,73;UBERON:0002780,6.36e-18,39;UBERON:0001890,6.36e-18,39;UBERON:0006240,6.36e-18,39;UBERON:0000956,1.30e-15,21;UBERON:0001869,1.30e-15,21;UBERON:0000203,1.30e-15,21;UBERON:0003056,1.41e-13,49;UBERON:0002619,3.08e-12,17;UBERON:0010314,1.40e-11,92;UBERON:0002021,2.76e-10,10;UBERON:0000411,2.76e-10,10;UBERON:0001950,2.76e-10,10;UBERON:0002410,9.54e-10,9;UBERON:0000010,1.10e-09,11;UBERON:0002420,6.84e-09,8;UBERON:0007245,6.84e-09,8;UBERON:0010009,6.84e-09,8;UBERON:0010011,6.84e-09,8;UBERON:0000454,6.84e-09,8;UBERON:0003076,4.30e-08,12;UBERON:0003057,4.30e-08,12;UBERON:0002240,2.49e-07,6;UBERON:0005174,2.49e-07,6;UBERON:0001137,2.49e-07,6;UBERON:0001948,8.67e-07,5;UBERON:0002315,8.67e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,8.29497489524351,5.28990979272033,2.53532561402472,0,0,0,0,0,0.299600110518405,0.768436610643109,4.56234294157302,2.8351247049655,3.99617426567626,4.57041575046086,3.97563373712904,4.65465037016825,2.1086003624012,2.75765635983006,2.20231761998777,5.10749352340751,4.91540906419979,6.85808696197008,8.23388792421687,8.33461392890816,2.23346399201105,6.19038871034848,4.5839474333043,9.72274332063103,8.82704420954438,7.26957838718672,0.605809546665472,10.1265890543093,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0.148442139064825,0,0.608930956624282,0,0.452167921657868,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,2.92780797011547,3.56059401582874,0,0,0,0,5.99162557619291,1.37250180845588,6.28271760564322,3.99795936442236,6.64860189058859,4.1557608911912,4.54275536589721,0,0,0,0.210441855886474,0,0,0.360124259610698,0.452114453507145,0.476255494059295,0.2562274405697,0.468508622798644,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,3.36463917702604,9.67303356365274,0,0,0,0.928946687441754,0.38660238396628,0.605050573870028,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12661 | |||
|HGNC= | |||
|MCL_coexpression_id=1203 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QMU6,uniprot:A2RRK1,uniprot:E9QL95,uniprot:P70232 | |||
|association_with_transcript=0bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end | |||
|cluster_id=chr6:103460868..103460892,+ | |||
|description=CAGE_peak_9_at_Chl1_5end | |||
|id=chr6:103460868..103460892,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.74e-22!33;CL:0000047!1.74e-22!33;CL:0000031!1.74e-22!33;CL:0000404!1.74e-22!33;CL:0000221!1.70e-19!44;CL:0000133!1.70e-19!44;CL:0002319!1.92e-19!43;CL:0000117!1.55e-16!23;CL:0000337!1.55e-16!23;CL:0000393!1.74e-16!39;CL:0000211!1.74e-16!39;CL:0000055!2.99e-14!50;CL:0000107!3.08e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.33e-31,33;CL:0000047,9.33e-31,33;CL:0000031,9.33e-31,33;CL:0000404,9.33e-31,33;CL:0000393,3.36e-24,39;CL:0000211,3.36e-24,39;CL:0000117,3.79e-23,23;CL:0000337,3.79e-23,23;CL:0002319,8.30e-23,43;CL:0000221,5.11e-22,44;CL:0000133,5.11e-22,44;CL:0000107,9.54e-10,9;CL:0002321,1.01e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.00e-31!75;UBERON:0001016!2.00e-31!75;UBERON:0001017!3.40e-30!73;UBERON:0005743!3.40e-30!73;UBERON:0004121!1.86e-26!102;UBERON:0000924!1.86e-26!102;UBERON:0006601!1.86e-26!102;UBERON:0002020!5.47e-21!34;UBERON:0002346!1.20e-19!71;UBERON:0003075!1.20e-19!71;UBERON:0007284!1.20e-19!71;UBERON:0001049!1.21e-19!52;UBERON:0005068!1.21e-19!52;UBERON:0006241!1.21e-19!52;UBERON:0007135!1.21e-19!52;UBERON:0000955!1.21e-17!50;UBERON:0006238!1.21e-17!50;UBERON:0002616!2.35e-17!49;UBERON:0002791!4.23e-17!29;UBERON:0003528!4.23e-17!29;UBERON:0001893!4.23e-17!29;UBERON:0000033!2.64e-16!63;UBERON:0003080!9.03e-15!40;UBERON:0002780!4.66e-14!39;UBERON:0001890!4.66e-14!39;UBERON:0006240!4.66e-14!39;UBERON:0003056!1.39e-13!49;UBERON:0000956!9.44e-12!21;UBERON:0001869!9.44e-12!21;UBERON:0000203!9.44e-12!21;UBERON:0007811!2.52e-11!86;UBERON:0000153!4.94e-11!94;UBERON:0002619!2.15e-09!17;UBERON:0000010!3.68e-08!11;UBERON:0002021!1.30e-07!10;UBERON:0000411!1.30e-07!10;UBERON:0001950!1.30e-07!10;UBERON:0002410!3.08e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.13e-37,75;UBERON:0001017,7.19e-37,73;UBERON:0002020,6.95e-29,34;UBERON:0000073,1.57e-28,54;UBERON:0001049,1.79e-26,52;UBERON:0005068,1.79e-26,52;UBERON:0006241,1.79e-26,52;UBERON:0007135,1.79e-26,52;UBERON:0004121,1.52e-25,95;UBERON:0000924,1.52e-25,95;UBERON:0006601,1.52e-25,95;UBERON:0003528,2.72e-23,29;UBERON:0002791,2.72e-23,29;UBERON:0001893,2.72e-23,29;UBERON:0002346,9.49e-23,64;UBERON:0003075,9.49e-23,64;UBERON:0007284,9.49e-23,64;UBERON:0002616,1.31e-20,46;UBERON:0000955,6.39e-20,47;UBERON:0006238,6.39e-20,47;UBERON:0003080,6.36e-19,40;UBERON:0010371,3.68e-18,73;UBERON:0002780,6.36e-18,39;UBERON:0001890,6.36e-18,39;UBERON:0006240,6.36e-18,39;UBERON:0000956,1.30e-15,21;UBERON:0001869,1.30e-15,21;UBERON:0000203,1.30e-15,21;UBERON:0003056,1.41e-13,49;UBERON:0002619,3.08e-12,17;UBERON:0010314,1.40e-11,92;UBERON:0002021,2.76e-10,10;UBERON:0000411,2.76e-10,10;UBERON:0001950,2.76e-10,10;UBERON:0002410,9.54e-10,9;UBERON:0000010,1.10e-09,11;UBERON:0002420,6.84e-09,8;UBERON:0007245,6.84e-09,8;UBERON:0010009,6.84e-09,8;UBERON:0010011,6.84e-09,8;UBERON:0000454,6.84e-09,8;UBERON:0003076,4.30e-08,12;UBERON:0003057,4.30e-08,12;UBERON:0002240,2.49e-07,6;UBERON:0005174,2.49e-07,6;UBERON:0001137,2.49e-07,6;UBERON:0001948,8.67e-07,5;UBERON:0002315,8.67e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,8.29497489524351,5.28990979272033,2.53532561402472,0,0,0,0,0,0.299600110518405,0.768436610643109,4.56234294157302,2.8351247049655,3.99617426567626,4.57041575046086,3.97563373712904,4.65465037016825,2.1086003624012,2.75765635983006,2.20231761998777,5.10749352340751,4.91540906419979,6.85808696197008,8.23388792421687,8.33461392890816,2.23346399201105,6.19038871034848,4.5839474333043,9.72274332063103,8.82704420954438,7.26957838718672,0.605809546665472,10.1265890543093,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0.148442139064825,0,0.608930956624282,0,0.452167921657868,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,2.92780797011547,3.56059401582874,0,0,0,0,5.99162557619291,1.37250180845588,6.28271760564322,3.99795936442236,6.64860189058859,4.1557608911912,4.54275536589721,0,0,0,0.210441855886474,0,0,0.360124259610698,0.452114453507145,0.476255494059295,0.2562274405697,0.468508622798644,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,3.36463917702604,9.67303356365274,0,0,0,0.928946687441754,0.38660238396628,0.605050573870028,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,2.81308047821288,0,0,2.52406575533005,1.95219372148319,4.52389135238878,5.9742199488138,5.34716817797746,9.05844898524264,3.23848561339915,5.26060544240361,7.11518000303742,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.329098041204242,0,0,0,0.220528398054962,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.432021363287205,1.46361807210128,0.655087691238533,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.201652370273681,0.194915761479505,0.481059208201647,0.233753804363138,0.453460767230423,0,0,0,0.386379188064381,0,0,0,0,5.64751842617067,3.22227665555024,5.15605962095457,3.60891682921744,4.11049511862385,5.2877572817279,4.72515750162264,2.70192721934532,4.07828168085784,3.62432218226274,0.31136204275253,2.39414924040619,1.53660245178721,0.972426868273176,1.88651846365184,2.02227859295016,1.33348036680969,1.23621034343337,1.60459604795908,1.76888048234658,2.28131369901216,2.26351609663291,1.87283014939765,2.4969809437899,2.41228969613576,1.42888107384922,1.39061191133827,1.73618298417335,1.64834360321323,1.91358596174717,0.342869252385415,1.4198064492747,1.43061713968393,1.59881058295561,1.78807822789128,1.4384483341585,1.28049581010941,1.31534855718921,1.22223702461276,1.12228454331548,1.54225523561426,1.77308068276014,1.63692417267876,1.54936841185966,1.73615949883027,2.99772693525535,0.935726433781634,1.28922632428979,0.57386499620653,0,0.231867835620421 | |||
|short_description=p9@Chl1 | |||
}} |
Revision as of 20:51, 4 August 2015
Short description: | p9@Chl1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Chl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1203 |
Association with transcript: | 0bp_to_ENSMUST00000032163, ENSMUST00000066905, ENSMUST00000089225, NM_007697, uc009dcj.1, uc009dck.1_5end |
EntrezGene: | 12661 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.33e-31 | 33 |
neuronal stem cell | 9.33e-31 | 33 |
neuroblast | 9.33e-31 | 33 |
electrically signaling cell | 9.33e-31 | 33 |
electrically responsive cell | 3.36e-24 | 39 |
electrically active cell | 3.36e-24 | 39 |
CNS neuron (sensu Vertebrata) | 3.79e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.79e-23 | 23 |
neural cell | 8.30e-23 | 43 |
ectodermal cell | 5.11e-22 | 44 |
neurectodermal cell | 5.11e-22 | 44 |
autonomic neuron | 9.54e-10 | 9 |
embryonic cell | 1.01e-09 | 70 |