FFCP PHASE1:Mm9::chr2:28048712..28048734,+: Difference between revisions
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{{FFCP|EntrezGene=56177|HGNC=|MCL_coexpression_id=2|UniProt=G3X9Q7,Q8R357,O88998,A3KGE4|association_with_transcript=99bp_to_ENSMUST00000100244,NM_001038613,NM_001038614,uc008iya.1,uc008iyb.1_5end|description=CAGE_peak_5_at_Olfm1_5end|id=chr2:28048712..28048734,+|ontology_enrichment_celltype=CL:0000221!9.60e-15!44;CL:0000133!9.60e-15!44;CL:0002319!1.40e-14!43;CL:0000117!2.04e-14!23;CL:0000337!2.04e-14!23;CL:0000540!7.63e-14!33;CL:0000047!7.63e-14!33;CL:0000031!7.63e-14!33;CL:0000404!7.63e-14!33;CL:0000055!4.12e-11!50;CL:0000393!1.23e-10!39;CL:0000211!1.23e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.64e-20,23;CL:0000337,4.64e-20,23;CL:0000540,3.16e-13,33;CL:0000047,3.16e-13,33;CL:0000031,3.16e-13,33;CL:0000404,3.16e-13,33;CL:0000221,1.32e-12,44;CL:0000133,1.32e-12,44;CL:0002319,2.35e-12,43;CL:0000393,7.95e-10,39;CL:0000211,7.95e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.27e-32!75;UBERON:0001016!4.27e-32!75;UBERON:0001017!4.97e-32!73;UBERON:0005743!4.97e-32!73;UBERON:0004121!5.10e-31!102;UBERON:0000924!5.10e-31!102;UBERON:0006601!5.10e-31!102;UBERON:0002346!1.02e-28!71;UBERON:0003075!1.02e-28!71;UBERON:0007284!1.02e-28!71;UBERON:0001049!1.75e-27!52;UBERON:0005068!1.75e-27!52;UBERON:0006241!1.75e-27!52;UBERON:0007135!1.75e-27!52;UBERON:0000955!1.75e-26!50;UBERON:0006238!1.75e-26!50;UBERON:0000033!2.10e-26!63;UBERON:0002616!9.96e-26!49;UBERON:0003056!1.72e-22!49;UBERON:0002020!5.67e-22!34;UBERON:0003080!4.25e-21!40;UBERON:0002780!1.38e-20!39;UBERON:0001890!1.38e-20!39;UBERON:0006240!1.38e-20!39;UBERON:0002791!1.03e-18!29;UBERON:0003528!1.03e-18!29;UBERON:0001893!1.03e-18!29;UBERON:0000956!3.58e-14!21;UBERON:0001869!3.58e-14!21;UBERON:0000203!3.58e-14!21;UBERON:0007811!1.24e-12!86;UBERON:0000153!3.04e-12!94;UBERON:0002619!6.97e-12!17;UBERON:0002021!1.24e-08!10;UBERON:0000411!1.24e-08!10;UBERON:0001950!1.24e-08!10;UBERON:0003076!7.11e-07!12;UBERON:0003057!7.11e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.85e-38,54;UBERON:0001049,5.49e-36,52;UBERON:0005068,5.49e-36,52;UBERON:0006241,5.49e-36,52;UBERON:0007135,5.49e-36,52;UBERON:0001017,2.52e-35,73;UBERON:0002346,3.26e-34,64;UBERON:0003075,3.26e-34,64;UBERON:0007284,3.26e-34,64;UBERON:0001016,8.76e-34,75;UBERON:0000955,1.40e-31,47;UBERON:0006238,1.40e-31,47;UBERON:0002020,5.84e-31,34;UBERON:0002616,1.56e-30,46;UBERON:0004121,1.01e-29,95;UBERON:0000924,1.01e-29,95;UBERON:0006601,1.01e-29,95;UBERON:0010371,1.60e-29,73;UBERON:0003056,1.33e-28,49;UBERON:0003080,6.47e-28,40;UBERON:0002780,3.51e-27,39;UBERON:0001890,3.51e-27,39;UBERON:0006240,3.51e-27,39;UBERON:0003528,2.94e-26,29;UBERON:0002791,2.94e-26,29;UBERON:0001893,2.94e-26,29;UBERON:0000956,1.05e-19,21;UBERON:0001869,1.05e-19,21;UBERON:0000203,1.05e-19,21;UBERON:0010314,3.30e-19,92;UBERON:0002619,2.08e-16,17;UBERON:0002021,9.80e-12,10;UBERON:0000411,9.80e-12,10;UBERON:0001950,9.80e-12,10;UBERON:0003076,3.13e-08,12;UBERON:0003057,3.13e-08,12;UBERON:0002420,1.27e-07,8;UBERON:0007245,1.27e-07,8;UBERON:0010009,1.27e-07,8;UBERON:0010011,1.27e-07,8;UBERON:0000454,1.27e-07,8;UBERON:0000025,1.34e-07,114;UBERON:0004111,5.90e-07,122|phase1_expression=1.92178616525753,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0,3.9119567217402,0.65407546914134,3.07560655828261,2.52758868796568,0.699932108126813,0,0,0,0,0.257259436035947,0,0,14.9714181036102,19.5726662330652,12.6766280701236,0,0.889294796111139,0.449949858640699,0,0,2.09720077362883,1.53687322128622,10.1615820062308,13.3655878948374,14.302097371894,15.996455126613,16.7860091123226,11.1466627285608,9.4887016308054,10.1114066527102,15.4162233399144,26.3035916455487,20.8904885228491,17.4089899803856,19.7613310181205,16.6692278578163,8.37548997004143,12.9435400307286,18.3357897332172,25.6326869362091,20.0744069926735,19.0127434741807,0.454357159999104,0.906858721281426,0,0,0,0,0,0,1.54488862144927,0,0,0,1.12674735821344,0,0,0,0,0,0,0.91347103775248,0.517875767294343,0.593768556259299,0.346970653532272,0.913396434936424,0.230615497256059,0.753613202763113,0.587943535678524,0.502666365318702,0,0.722996784599558,0,0.647067399789637,0.220841518460394,0,0,9.36898550436951,6.91174132484402,0.510914110417183,0,0,0,6.89036941262184,10.5225138648284,8.54449594367478,44.6728502894151,33.243009452943,15.7918913865266,21.5780879880118,0.509196819251581,0,0.252722758433675,0.210441855886474,0.650602214813519,1.83921683546778,1.80062129805349,2.56198190320716,1.76894897793452,2.8185018462667,2.99845518591132,1.29351685369508,0,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,55.5165464209296,20.6838270882362,0,0,0,0,0.77320476793256,0.605050573870028,0.444756087689741,0.190225626112559,0,0.329397909448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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56177 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X9Q7,uniprot:Q8R357,uniprot:O88998,uniprot:A3KGE4 | |||
|association_with_transcript=99bp_to_ENSMUST00000100244,NM_001038613,NM_001038614,uc008iya.1,uc008iyb.1_5end | |||
|cluster_id=chr2:28048712..28048734,+ | |||
|description=CAGE_peak_5_at_Olfm1_5end | |||
|id=chr2:28048712..28048734,+ | |||
|ontology_enrichment_celltype=CL:0000221!9.60e-15!44;CL:0000133!9.60e-15!44;CL:0002319!1.40e-14!43;CL:0000117!2.04e-14!23;CL:0000337!2.04e-14!23;CL:0000540!7.63e-14!33;CL:0000047!7.63e-14!33;CL:0000031!7.63e-14!33;CL:0000404!7.63e-14!33;CL:0000055!4.12e-11!50;CL:0000393!1.23e-10!39;CL:0000211!1.23e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.64e-20,23;CL:0000337,4.64e-20,23;CL:0000540,3.16e-13,33;CL:0000047,3.16e-13,33;CL:0000031,3.16e-13,33;CL:0000404,3.16e-13,33;CL:0000221,1.32e-12,44;CL:0000133,1.32e-12,44;CL:0002319,2.35e-12,43;CL:0000393,7.95e-10,39;CL:0000211,7.95e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.27e-32!75;UBERON:0001016!4.27e-32!75;UBERON:0001017!4.97e-32!73;UBERON:0005743!4.97e-32!73;UBERON:0004121!5.10e-31!102;UBERON:0000924!5.10e-31!102;UBERON:0006601!5.10e-31!102;UBERON:0002346!1.02e-28!71;UBERON:0003075!1.02e-28!71;UBERON:0007284!1.02e-28!71;UBERON:0001049!1.75e-27!52;UBERON:0005068!1.75e-27!52;UBERON:0006241!1.75e-27!52;UBERON:0007135!1.75e-27!52;UBERON:0000955!1.75e-26!50;UBERON:0006238!1.75e-26!50;UBERON:0000033!2.10e-26!63;UBERON:0002616!9.96e-26!49;UBERON:0003056!1.72e-22!49;UBERON:0002020!5.67e-22!34;UBERON:0003080!4.25e-21!40;UBERON:0002780!1.38e-20!39;UBERON:0001890!1.38e-20!39;UBERON:0006240!1.38e-20!39;UBERON:0002791!1.03e-18!29;UBERON:0003528!1.03e-18!29;UBERON:0001893!1.03e-18!29;UBERON:0000956!3.58e-14!21;UBERON:0001869!3.58e-14!21;UBERON:0000203!3.58e-14!21;UBERON:0007811!1.24e-12!86;UBERON:0000153!3.04e-12!94;UBERON:0002619!6.97e-12!17;UBERON:0002021!1.24e-08!10;UBERON:0000411!1.24e-08!10;UBERON:0001950!1.24e-08!10;UBERON:0003076!7.11e-07!12;UBERON:0003057!7.11e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.85e-38,54;UBERON:0001049,5.49e-36,52;UBERON:0005068,5.49e-36,52;UBERON:0006241,5.49e-36,52;UBERON:0007135,5.49e-36,52;UBERON:0001017,2.52e-35,73;UBERON:0002346,3.26e-34,64;UBERON:0003075,3.26e-34,64;UBERON:0007284,3.26e-34,64;UBERON:0001016,8.76e-34,75;UBERON:0000955,1.40e-31,47;UBERON:0006238,1.40e-31,47;UBERON:0002020,5.84e-31,34;UBERON:0002616,1.56e-30,46;UBERON:0004121,1.01e-29,95;UBERON:0000924,1.01e-29,95;UBERON:0006601,1.01e-29,95;UBERON:0010371,1.60e-29,73;UBERON:0003056,1.33e-28,49;UBERON:0003080,6.47e-28,40;UBERON:0002780,3.51e-27,39;UBERON:0001890,3.51e-27,39;UBERON:0006240,3.51e-27,39;UBERON:0003528,2.94e-26,29;UBERON:0002791,2.94e-26,29;UBERON:0001893,2.94e-26,29;UBERON:0000956,1.05e-19,21;UBERON:0001869,1.05e-19,21;UBERON:0000203,1.05e-19,21;UBERON:0010314,3.30e-19,92;UBERON:0002619,2.08e-16,17;UBERON:0002021,9.80e-12,10;UBERON:0000411,9.80e-12,10;UBERON:0001950,9.80e-12,10;UBERON:0003076,3.13e-08,12;UBERON:0003057,3.13e-08,12;UBERON:0002420,1.27e-07,8;UBERON:0007245,1.27e-07,8;UBERON:0010009,1.27e-07,8;UBERON:0010011,1.27e-07,8;UBERON:0000454,1.27e-07,8;UBERON:0000025,1.34e-07,114;UBERON:0004111,5.90e-07,122 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0,3.9119567217402,0.65407546914134,3.07560655828261,2.52758868796568,0.699932108126813,0,0,0,0,0.257259436035947,0,0,14.9714181036102,19.5726662330652,12.6766280701236,0,0.889294796111139,0.449949858640699,0,0,2.09720077362883,1.53687322128622,10.1615820062308,13.3655878948374,14.302097371894,15.996455126613,16.7860091123226,11.1466627285608,9.4887016308054,10.1114066527102,15.4162233399144,26.3035916455487,20.8904885228491,17.4089899803856,19.7613310181205,16.6692278578163,8.37548997004143,12.9435400307286,18.3357897332172,25.6326869362091,20.0744069926735,19.0127434741807,0.454357159999104,0.906858721281426,0,0,0,0,0,0,1.54488862144927,0,0,0,1.12674735821344,0,0,0,0,0,0,0.91347103775248,0.517875767294343,0.593768556259299,0.346970653532272,0.913396434936424,0.230615497256059,0.753613202763113,0.587943535678524,0.502666365318702,0,0.722996784599558,0,0.647067399789637,0.220841518460394,0,0,9.36898550436951,6.91174132484402,0.510914110417183,0,0,0,6.89036941262184,10.5225138648284,8.54449594367478,44.6728502894151,33.243009452943,15.7918913865266,21.5780879880118,0.509196819251581,0,0.252722758433675,0.210441855886474,0.650602214813519,1.83921683546778,1.80062129805349,2.56198190320716,1.76894897793452,2.8185018462667,2.99845518591132,1.29351685369508,0,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,55.5165464209296,20.6838270882362,0,0,0,0,0.77320476793256,0.605050573870028,0.444756087689741,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.58489226135736,0,0,0,0.379335801906163,0,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0.325929952884052,0.169745085775188,0.234690248288502,0,0.238043640886014,0.390267295715598,0.472905432318573,0,0.478364305972461,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0,4.81651769963376,5.86058432961016,0,0.252470927204373,0.631016438832513,0.390438744296638,0.861693590931196,0.477937595905104,0.891194696329576,0.849229592366497,0.404810701674894,0.292255857911312,1.97643888973262,35.6666661228206,0.567760340833074,0.712262414669021,0.488660878060728,1.15479086080775,0,0.242780636154981,0,0.188605079755898,0.885905678642318,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,1.03135543248187,3.74483566329167,0.18006109403131,0.388076051348264,1.50035924522115,0.354680467284547,3.56737635204141,3.62007845324666,3.95804433848979,0,0,0,0.32977250588296,0.484393280087717,0.603129249281559,0.477489376012546,0.328281799490123,0,2.96680483216816,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0.316335993581135,0.203319467126849,0.86404272657441,0,0.655087691238533,0.404593039154462,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.39061315453185,0.209718688851422,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0.179427713218951,0,0.579568782096571,3.94133198447482,1.09890974560359,0.643105137237198,0,60.9931990026432,67.667809766555,57.8624468573791,58.7737883615412,71.2485820561468,74.7839958415803,55.3518450190081,70.7004289062026,65.2525068937255,70.4154023982475,0.62272408550506,3.59122386060928,2.56100408631201,1.45864030240976,0.419226325255965,1.47074806760011,4.00044110042907,3.91466608753899,1.92551525755089,3.03236654116557,1.77435509923168,3.39527414494937,2.34103768674706,2.88113185821912,2.81433797882505,3.81034953026459,2.78122382267653,3.6652751888104,3.29668720642645,2.94397840268795,4.4573002810104,2.12970967391205,2.38436189947321,2.47088908274958,2.1645157495526,2.70766745253365,3.10977553883713,2.63069711437843,2.8518863907631,2.24456908663095,3.08451047122853,1.67457620038458,1.63692417267876,2.16911577660352,2.50778594275484,9.49280196164194,2.8071793013449,2.57845264857958,1.72159498861959,1.10295709559758,1.85494268496337 | |||
|short_description=p5@Olfm1 | |||
}} |
Revision as of 22:37, 4 August 2015
Short description: | p5@Olfm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Olfm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 99bp_to_ENSMUST00000100244, NM_001038613, NM_001038614, uc008iya.1, uc008iyb.1_5end |
EntrezGene: | 56177 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.64e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.64e-20 | 23 |
neuron | 3.16e-13 | 33 |
neuronal stem cell | 3.16e-13 | 33 |
neuroblast | 3.16e-13 | 33 |
electrically signaling cell | 3.16e-13 | 33 |
ectodermal cell | 1.32e-12 | 44 |
neurectodermal cell | 1.32e-12 | 44 |
neural cell | 2.35e-12 | 43 |
electrically responsive cell | 7.95e-10 | 39 |
electrically active cell | 7.95e-10 | 39 |