FFCP PHASE1:Mm9::chr12:4788942..4788960,+: Difference between revisions
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{{FFCP|EntrezGene=626534|HGNC=|UniProt=Q5FW91|association_with_transcript=-15bp_to_NR_033599,uc011yjw.1_5end|description=CAGE_peak_2_at_Gm6682_5end|id=chr12:4788942..4788960,+|ontology_enrichment_celltype=CL:0000988!4.23e-07!32;CL:0002032!4.23e-07!32;CL:0000037!4.23e-07!32;CL:0000566!4.23e-07!32;CL:0000837!4.23e-07!32|ontology_enrichment_celltype_v019_2=CL:0000988,2.46e-17,32;CL:0002032,2.46e-17,32;CL:0000037,2.46e-17,32;CL:0000837,2.46e-17,32;CL:0002320,2.12e-16,46;CL:0000134,2.12e-16,46;CL:0000893,7.13e-14,6;CL:0002489,7.13e-14,6;CL:0000898,7.13e-14,6;CL:0000809,7.13e-14,6;CL:0000810,7.13e-14,6;CL:0000895,7.13e-14,6;CL:0000808,7.13e-14,6;CL:0000894,7.13e-14,6;CL:0000806,7.13e-14,6;CL:0000807,7.13e-14,6;CL:0000805,7.13e-14,6;CL:0002425,7.13e-14,6;CL:0002436,7.13e-14,6;CL:0002427,7.13e-14,6;CL:0002428,7.13e-14,6;CL:0002429,7.13e-14,6;CL:0002433,7.13e-14,6;CL:0002431,7.13e-14,6;CL:0002432,7.13e-14,6;CL:0000219,1.10e-13,54;CL:0000738,1.51e-13,17;CL:0002087,1.51e-13,17;CL:0000034,1.61e-12,97;CL:0000049,4.39e-12,19;CL:0000723,8.19e-12,91;CL:0000048,8.19e-12,91;CL:0002031,1.19e-11,25;CL:0000557,2.76e-11,7;CL:0002194,3.64e-11,4;CL:0000766,3.64e-11,4;CL:0000234,3.64e-11,4;CL:0000576,3.64e-11,4;CL:0000235,3.64e-11,4;CL:0000864,3.64e-11,4;CL:0002009,3.64e-11,4;CL:0000040,3.64e-11,4;CL:0000559,3.64e-11,4;CL:0000624,1.89e-10,8;CL:0000878,3.30e-10,2;CL:0000129,3.30e-10,2;CL:0000791,2.64e-09,9;CL:0000789,2.64e-09,9;CL:0002420,2.64e-09,9;CL:0002419,2.64e-09,9;CL:0000790,2.64e-09,9;CL:0000084,1.23e-07,11;CL:0000827,1.23e-07,11;CL:0000763,1.94e-07,16;CL:0002092,2.07e-07,3;CL:0002540,2.07e-07,3;CL:0000838,5.23e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.16e-15,3;DOID:4045,1.16e-15,3;DOID:0050686,4.32e-08,6|ontology_enrichment_uberon=UBERON:0002193!9.47e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.12e-16,46;UBERON:0002371,3.82e-14,16;UBERON:0002204,6.76e-14,32;UBERON:0002390,1.11e-11,45;UBERON:0003061,1.11e-11,45;UBERON:0002193,7.50e-11,48;UBERON:0002405,7.50e-11,48;UBERON:0001474,4.18e-10,22;UBERON:0004765,4.18e-10,22;UBERON:0001434,4.18e-10,22|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,0.129123323441576,2.25261955442667,1.40438715793196,3.76679530096111,3.66951931378547,0,0.0874204024189974,0.333109761815663,0,0,1.41957974411207,0.822686601634433,0.84877930359606,0.17008658030214,0.794327609607082,0.522399578277871,0.639969691173627,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0.204169356262369,1.67412652294763,3.1253413780952,2.09409497589519,0.588231488031014,2.04913645487534,0,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0.659058548203415,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0,0,0,1.3498495759221,0,2.1314403448383,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0.679971333707751,0,0,0,0,0.852151612890289,0.519572009205738,0.35333957451034,0,0,0,0,0.432982082022428,0,0,0,0.258937883647172,0,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0,0.969750506270444,0,0,0,0,3.11519323715393,0.599902730993408,5.59108999121485,0.149790639404823,0,0,0,0,0,0,0.407357455401265,0.373220911830279,0.252722758433675,0,0.260240885925407,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0.51469581422943,3.12579849335152,0,0,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0.393117990226406,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0,0,0.505157755894224,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0.315270288212382,0,0,0,0.345369963731791,0.144649058581512,1.50791283939272,0,0,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.35613120733451,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0,0.36012218806262,0,0.214337035031592,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.361877549568935,0.238744688006273,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0,0.565105371014073,0.683471138605126,0.915112692826091,1.01987057996313,0.69975726161829,0.829199842826543,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0.330916980914195,0,0.258319646955462,0.337912250981556,0.352071715937262,0.2604087696879,0.314578033277133,0.483168241652012,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0.221985953374065,0.62799699626633,0.167884616364078,0.386379188064381,0.375364950902364,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p2@Gm6682}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:626534 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5FW91 | |||
|association_with_transcript=-15bp_to_NR_033599,uc011yjw.1_5end | |||
|cluster_id=chr12:4788942..4788960,+ | |||
|description=CAGE_peak_2_at_Gm6682_5end | |||
|id=chr12:4788942..4788960,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.23e-07!32;CL:0002032!4.23e-07!32;CL:0000037!4.23e-07!32;CL:0000566!4.23e-07!32;CL:0000837!4.23e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.46e-17,32;CL:0002032,2.46e-17,32;CL:0000037,2.46e-17,32;CL:0000837,2.46e-17,32;CL:0002320,2.12e-16,46;CL:0000134,2.12e-16,46;CL:0000893,7.13e-14,6;CL:0002489,7.13e-14,6;CL:0000898,7.13e-14,6;CL:0000809,7.13e-14,6;CL:0000810,7.13e-14,6;CL:0000895,7.13e-14,6;CL:0000808,7.13e-14,6;CL:0000894,7.13e-14,6;CL:0000806,7.13e-14,6;CL:0000807,7.13e-14,6;CL:0000805,7.13e-14,6;CL:0002425,7.13e-14,6;CL:0002436,7.13e-14,6;CL:0002427,7.13e-14,6;CL:0002428,7.13e-14,6;CL:0002429,7.13e-14,6;CL:0002433,7.13e-14,6;CL:0002431,7.13e-14,6;CL:0002432,7.13e-14,6;CL:0000219,1.10e-13,54;CL:0000738,1.51e-13,17;CL:0002087,1.51e-13,17;CL:0000034,1.61e-12,97;CL:0000049,4.39e-12,19;CL:0000723,8.19e-12,91;CL:0000048,8.19e-12,91;CL:0002031,1.19e-11,25;CL:0000557,2.76e-11,7;CL:0002194,3.64e-11,4;CL:0000766,3.64e-11,4;CL:0000234,3.64e-11,4;CL:0000576,3.64e-11,4;CL:0000235,3.64e-11,4;CL:0000864,3.64e-11,4;CL:0002009,3.64e-11,4;CL:0000040,3.64e-11,4;CL:0000559,3.64e-11,4;CL:0000624,1.89e-10,8;CL:0000878,3.30e-10,2;CL:0000129,3.30e-10,2;CL:0000791,2.64e-09,9;CL:0000789,2.64e-09,9;CL:0002420,2.64e-09,9;CL:0002419,2.64e-09,9;CL:0000790,2.64e-09,9;CL:0000084,1.23e-07,11;CL:0000827,1.23e-07,11;CL:0000763,1.94e-07,16;CL:0002092,2.07e-07,3;CL:0002540,2.07e-07,3;CL:0000838,5.23e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.16e-15,3;DOID:4045,1.16e-15,3;DOID:0050686,4.32e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!9.47e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.12e-16,46;UBERON:0002371,3.82e-14,16;UBERON:0002204,6.76e-14,32;UBERON:0002390,1.11e-11,45;UBERON:0003061,1.11e-11,45;UBERON:0002193,7.50e-11,48;UBERON:0002405,7.50e-11,48;UBERON:0001474,4.18e-10,22;UBERON:0004765,4.18e-10,22;UBERON:0001434,4.18e-10,22 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,0.129123323441576,2.25261955442667,1.40438715793196,3.76679530096111,3.66951931378547,0,0.0874204024189974,0.333109761815663,0,0,1.41957974411207,0.822686601634433,0.84877930359606,0.17008658030214,0.794327609607082,0.522399578277871,0.639969691173627,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0.204169356262369,1.67412652294763,3.1253413780952,2.09409497589519,0.588231488031014,2.04913645487534,0,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0.659058548203415,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0,0,0,1.3498495759221,0,2.1314403448383,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0.679971333707751,0,0,0,0,0.852151612890289,0.519572009205738,0.35333957451034,0,0,0,0,0.432982082022428,0,0,0,0.258937883647172,0,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0,0.969750506270444,0,0,0,0,3.11519323715393,0.599902730993408,5.59108999121485,0.149790639404823,0,0,0,0,0,0,0.407357455401265,0.373220911830279,0.252722758433675,0,0.260240885925407,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0.51469581422943,3.12579849335152,0,0,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0.393117990226406,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0,0,0.505157755894224,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0.315270288212382,0,0,0,0.345369963731791,0.144649058581512,1.50791283939272,0,0,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.35613120733451,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0,0.36012218806262,0,0.214337035031592,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.361877549568935,0.238744688006273,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0,0.565105371014073,0.683471138605126,0.915112692826091,1.01987057996313,0.69975726161829,0.829199842826543,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0.330916980914195,0,0.258319646955462,0.337912250981556,0.352071715937262,0.2604087696879,0.314578033277133,0.483168241652012,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0.221985953374065,0.62799699626633,0.167884616364078,0.386379188064381,0.375364950902364,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Gm6682 | |||
}} |
Revision as of 01:43, 5 August 2015
Short description: | p2@Gm6682 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm6682_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_NR_033599, uc011yjw.1_5end |
EntrezGene: | 626534 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.12e-16 | 46 |
bone marrow | 3.82e-14 | 16 |
musculoskeletal system | 6.76e-14 | 32 |
hematopoietic system | 1.11e-11 | 45 |
blood island | 1.11e-11 | 45 |
hemolymphoid system | 7.50e-11 | 48 |
immune system | 7.50e-11 | 48 |
bone element | 4.18e-10 | 22 |
skeletal element | 4.18e-10 | 22 |
skeletal system | 4.18e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.16e-15 | 3 |
muscle cancer | 1.16e-15 | 3 |
organ system cancer | 4.32e-08 | 6 |