FFCP PHASE1:Mm9::chr1:169528551..169528569,+: Difference between revisions
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{{FFCP|EntrezGene=20183|HGNC=|MCL_coexpression_id=1177|UniProt=P28705|association_with_transcript=-21bp_to_ENSMUST00000111386_5end|description=CAGE_peak_8_at_Rxrg_5end|id=chr1:169528551..169528569,+|ontology_enrichment_celltype=CL:0000117!3.97e-09!23;CL:0000337!3.97e-09!23|ontology_enrichment_celltype_v019_2=CL:0002608,2.68e-14,3;CL:0000117,3.82e-14,23;CL:0000337,3.82e-14,23;CL:0000540,1.76e-09,33;CL:0000047,1.76e-09,33;CL:0000031,1.76e-09,33;CL:0000404,1.76e-09,33;CL:0000393,7.88e-08,39;CL:0000211,7.88e-08,39;CL:0002609,2.17e-07,6;CL:0002319,5.52e-07,43;CL:0000221,8.50e-07,44;CL:0000133,8.50e-07,44;CL:0002612,9.60e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.54e-11!63;UBERON:0003056!3.38e-11!49;UBERON:0002346!3.94e-11!71;UBERON:0003075!3.94e-11!71;UBERON:0007284!3.94e-11!71;UBERON:0004121!1.30e-10!102;UBERON:0000924!1.30e-10!102;UBERON:0006601!1.30e-10!102;UBERON:0001049!4.86e-10!52;UBERON:0005068!4.86e-10!52;UBERON:0006241!4.86e-10!52;UBERON:0007135!4.86e-10!52;UBERON:0001017!2.12e-09!73;UBERON:0005743!2.12e-09!73;UBERON:0001894!3.02e-09!10;UBERON:0006222!3.02e-09!10;UBERON:0000073!8.34e-09!75;UBERON:0001016!8.34e-09!75;UBERON:0003080!2.64e-08!40;UBERON:0002780!8.00e-08!39;UBERON:0001890!8.00e-08!39;UBERON:0006240!8.00e-08!39;UBERON:0000955!1.07e-07!50;UBERON:0006238!1.07e-07!50;UBERON:0000007!1.68e-07!8;UBERON:0003296!1.68e-07!8;UBERON:0010133!1.68e-07!8;UBERON:0002616!3.50e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.66e-25,52;UBERON:0005068,1.66e-25,52;UBERON:0006241,1.66e-25,52;UBERON:0007135,1.66e-25,52;UBERON:0000073,1.83e-24,54;UBERON:0002780,7.15e-24,39;UBERON:0001890,7.15e-24,39;UBERON:0006240,7.15e-24,39;UBERON:0003080,3.23e-23,40;UBERON:0001894,9.38e-22,10;UBERON:0006222,9.38e-22,10;UBERON:0002346,3.15e-20,64;UBERON:0003075,3.15e-20,64;UBERON:0007284,3.15e-20,64;UBERON:0000007,3.47e-20,8;UBERON:0003296,3.47e-20,8;UBERON:0010133,3.47e-20,8;UBERON:0002616,7.04e-20,46;UBERON:0001017,1.39e-19,73;UBERON:0000955,2.10e-19,47;UBERON:0006238,2.10e-19,47;UBERON:0001016,5.48e-19,75;UBERON:0003056,1.63e-18,49;UBERON:0010371,2.11e-17,73;UBERON:0004121,2.10e-14,95;UBERON:0000924,2.10e-14,95;UBERON:0006601,2.10e-14,95;UBERON:0002020,3.20e-14,34;UBERON:0010314,3.07e-13,92;UBERON:0000025,3.88e-10,114;UBERON:0004111,2.77e-09,122;UBERON:0002420,3.02e-09,8;UBERON:0007245,3.02e-09,8;UBERON:0010009,3.02e-09,8;UBERON:0010011,3.02e-09,8;UBERON:0000454,3.02e-09,8;UBERON:0003528,5.70e-09,29;UBERON:0002791,5.70e-09,29;UBERON:0001893,5.70e-09,29;UBERON:0001948,2.05e-08,5;UBERON:0002315,2.05e-08,5;UBERON:0002240,4.34e-07,6;UBERON:0005174,4.34e-07,6;UBERON:0001137,4.34e-07,6;UBERON:0002257,9.60e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0,1.42825492201902,0.662605622854841,5.02212276781312,3.06705507258356,1.83843757322004,0,0.383062014255563,0.46081959976873,0.131886287730194,0.182975287204819,0,0,1.12552522006336,1.06958773443767,2.35702868378934,1.28134512719193,0.745597783301202,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0,0,0,0,0,0,0,0,0.449371918214468,16.0125210986519,14.0732874366408,2.08589184230732,0.255715457330331,0.83115217823824,3.73154905055843,0,0,0,0,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,0.272145996605311,0.512454881139399,0.187403449119458,0.258703370739016,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0.486412857275134,0.584799949701329,0,0.268412837520744,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,1.00988370881749,0,0,0,0,0,0.283076530788832,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,3.40439605753788,0.18006109403131,0.258717367565509,1.07168517515796,6.20690817747958,4.8159580752559,4.11372551505302,2.74018454203139,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,0.44449345560323,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.34461281373368,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.476872379894642,0.145346416632329,0.470546902076653,0.423073039458382,0.365855945745545,0.526139422875686,0.135804113845862,0,0.355905054372522,0.394017929502254,0,0.464810523557898,0.385813221962283,0.499621155875892,0.935726433781634,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p8@Rxrg}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20183 | |||
|HGNC= | |||
|MCL_coexpression_id=1177 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P28705 | |||
|association_with_transcript=-21bp_to_ENSMUST00000111386_5end | |||
|cluster_id=chr1:169528551..169528569,+ | |||
|description=CAGE_peak_8_at_Rxrg_5end | |||
|id=chr1:169528551..169528569,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.97e-09!23;CL:0000337!3.97e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,2.68e-14,3;CL:0000117,3.82e-14,23;CL:0000337,3.82e-14,23;CL:0000540,1.76e-09,33;CL:0000047,1.76e-09,33;CL:0000031,1.76e-09,33;CL:0000404,1.76e-09,33;CL:0000393,7.88e-08,39;CL:0000211,7.88e-08,39;CL:0002609,2.17e-07,6;CL:0002319,5.52e-07,43;CL:0000221,8.50e-07,44;CL:0000133,8.50e-07,44;CL:0002612,9.60e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.54e-11!63;UBERON:0003056!3.38e-11!49;UBERON:0002346!3.94e-11!71;UBERON:0003075!3.94e-11!71;UBERON:0007284!3.94e-11!71;UBERON:0004121!1.30e-10!102;UBERON:0000924!1.30e-10!102;UBERON:0006601!1.30e-10!102;UBERON:0001049!4.86e-10!52;UBERON:0005068!4.86e-10!52;UBERON:0006241!4.86e-10!52;UBERON:0007135!4.86e-10!52;UBERON:0001017!2.12e-09!73;UBERON:0005743!2.12e-09!73;UBERON:0001894!3.02e-09!10;UBERON:0006222!3.02e-09!10;UBERON:0000073!8.34e-09!75;UBERON:0001016!8.34e-09!75;UBERON:0003080!2.64e-08!40;UBERON:0002780!8.00e-08!39;UBERON:0001890!8.00e-08!39;UBERON:0006240!8.00e-08!39;UBERON:0000955!1.07e-07!50;UBERON:0006238!1.07e-07!50;UBERON:0000007!1.68e-07!8;UBERON:0003296!1.68e-07!8;UBERON:0010133!1.68e-07!8;UBERON:0002616!3.50e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.66e-25,52;UBERON:0005068,1.66e-25,52;UBERON:0006241,1.66e-25,52;UBERON:0007135,1.66e-25,52;UBERON:0000073,1.83e-24,54;UBERON:0002780,7.15e-24,39;UBERON:0001890,7.15e-24,39;UBERON:0006240,7.15e-24,39;UBERON:0003080,3.23e-23,40;UBERON:0001894,9.38e-22,10;UBERON:0006222,9.38e-22,10;UBERON:0002346,3.15e-20,64;UBERON:0003075,3.15e-20,64;UBERON:0007284,3.15e-20,64;UBERON:0000007,3.47e-20,8;UBERON:0003296,3.47e-20,8;UBERON:0010133,3.47e-20,8;UBERON:0002616,7.04e-20,46;UBERON:0001017,1.39e-19,73;UBERON:0000955,2.10e-19,47;UBERON:0006238,2.10e-19,47;UBERON:0001016,5.48e-19,75;UBERON:0003056,1.63e-18,49;UBERON:0010371,2.11e-17,73;UBERON:0004121,2.10e-14,95;UBERON:0000924,2.10e-14,95;UBERON:0006601,2.10e-14,95;UBERON:0002020,3.20e-14,34;UBERON:0010314,3.07e-13,92;UBERON:0000025,3.88e-10,114;UBERON:0004111,2.77e-09,122;UBERON:0002420,3.02e-09,8;UBERON:0007245,3.02e-09,8;UBERON:0010009,3.02e-09,8;UBERON:0010011,3.02e-09,8;UBERON:0000454,3.02e-09,8;UBERON:0003528,5.70e-09,29;UBERON:0002791,5.70e-09,29;UBERON:0001893,5.70e-09,29;UBERON:0001948,2.05e-08,5;UBERON:0002315,2.05e-08,5;UBERON:0002240,4.34e-07,6;UBERON:0005174,4.34e-07,6;UBERON:0001137,4.34e-07,6;UBERON:0002257,9.60e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0,1.42825492201902,0.662605622854841,5.02212276781312,3.06705507258356,1.83843757322004,0,0.383062014255563,0.46081959976873,0.131886287730194,0.182975287204819,0,0,1.12552522006336,1.06958773443767,2.35702868378934,1.28134512719193,0.745597783301202,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0,0,0,0,0,0,0,0,0.449371918214468,16.0125210986519,14.0732874366408,2.08589184230732,0.255715457330331,0.83115217823824,3.73154905055843,0,0,0,0,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,0.272145996605311,0.512454881139399,0.187403449119458,0.258703370739016,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0.486412857275134,0.584799949701329,0,0.268412837520744,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,1.00988370881749,0,0,0,0,0,0.283076530788832,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,3.40439605753788,0.18006109403131,0.258717367565509,1.07168517515796,6.20690817747958,4.8159580752559,4.11372551505302,2.74018454203139,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,0.44449345560323,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.34461281373368,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.476872379894642,0.145346416632329,0.470546902076653,0.423073039458382,0.365855945745545,0.526139422875686,0.135804113845862,0,0.355905054372522,0.394017929502254,0,0.464810523557898,0.385813221962283,0.499621155875892,0.935726433781634,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p8@Rxrg | |||
}} |
Revision as of 04:54, 5 August 2015
Short description: | p8@Rxrg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Rxrg_5end |
Coexpression cluster: | MCL_coexpression_mm9:1177 |
Association with transcript: | -21bp_to_ENSMUST00000111386_5end |
EntrezGene: | 20183 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 2.68e-14 | 3 |
CNS neuron (sensu Vertebrata) | 3.82e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.82e-14 | 23 |
neuron | 1.76e-09 | 33 |
neuronal stem cell | 1.76e-09 | 33 |
neuroblast | 1.76e-09 | 33 |
electrically signaling cell | 1.76e-09 | 33 |
electrically responsive cell | 7.88e-08 | 39 |
electrically active cell | 7.88e-08 | 39 |
neuron of cerebral cortex | 2.17e-07 | 6 |
neural cell | 5.52e-07 | 43 |
ectodermal cell | 8.50e-07 | 44 |
neurectodermal cell | 8.50e-07 | 44 |
neuron of the ventral spinal cord | 9.60e-07 | 3 |