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FFCP PHASE1:Mm9::chr4:153534744..153534805,-: Difference between revisions

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{{FFCP|EntrezGene=67808|HGNC=|MCL_coexpression_id=3001|UniProt=Q9DBS2|association_with_transcript=0bp_to_ENSMUST00000030896,ENSMUST00000134492,NM_026388,uc008wbm.1_5end|description=CAGE_peak_1_at_Tprgl_5end|id=chr4:153534744..153534805,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.03e-13!73;UBERON:0005743!3.03e-13!73;UBERON:0000073!1.10e-12!75;UBERON:0001016!1.10e-12!75;UBERON:0001049!2.72e-12!52;UBERON:0005068!2.72e-12!52;UBERON:0006241!2.72e-12!52;UBERON:0007135!2.72e-12!52;UBERON:0000955!8.93e-12!50;UBERON:0006238!8.93e-12!50;UBERON:0002616!9.28e-12!49;UBERON:0004121!2.79e-11!102;UBERON:0000924!2.79e-11!102;UBERON:0006601!2.79e-11!102;UBERON:0004111!2.35e-09!122;UBERON:0000033!5.32e-09!63;UBERON:0002346!8.10e-09!71;UBERON:0003075!8.10e-09!71;UBERON:0007284!8.10e-09!71;UBERON:0002020!3.50e-08!34;UBERON:0000025!4.02e-08!114;UBERON:0000062!8.27e-08!269;UBERON:0003080!1.06e-07!40;UBERON:0002780!2.91e-07!39;UBERON:0001890!2.91e-07!39;UBERON:0006240!2.91e-07!39;UBERON:0000480!3.99e-07!308;UBERON:0000467!3.99e-07!308|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.71e-13,54;UBERON:0001017,3.03e-13,73;UBERON:0001016,1.10e-12,75;UBERON:0001049,2.72e-12,52;UBERON:0005068,2.72e-12,52;UBERON:0006241,2.72e-12,52;UBERON:0007135,2.72e-12,52;UBERON:0004121,1.08e-10,95;UBERON:0000924,1.08e-10,95;UBERON:0006601,1.08e-10,95;UBERON:0000955,3.54e-10,47;UBERON:0006238,3.54e-10,47;UBERON:0002616,3.72e-10,46;UBERON:0004111,2.35e-09,122;UBERON:0010314,3.18e-09,92;UBERON:0002346,2.30e-08,64;UBERON:0003075,2.30e-08,64;UBERON:0007284,2.30e-08,64;UBERON:0002020,3.50e-08,34;UBERON:0000025,4.02e-08,114;UBERON:0010371,4.71e-08,73;UBERON:0003080,1.06e-07,40;UBERON:0000923,2.13e-07,291;UBERON:0010316,2.13e-07,291;UBERON:0005291,2.13e-07,291;UBERON:0006598,2.13e-07,291;UBERON:0010317,2.13e-07,291;UBERON:0002532,2.13e-07,291;UBERON:0002780,2.91e-07,39;UBERON:0001890,2.91e-07,39;UBERON:0006240,2.91e-07,39|phase1_expression=57.3332872635162,69.0971307125935,85.5398570052328,91.6466560259695,99.6782502593231,49.6922644859194,44.6200143537454,97.1007392280654,56.59706630497,57.5798734752104,45.5439795479843,44.353320401407,88.8531788342958,90.3052756988243,87.2747575957036,103.667336903591,167.195288872627,60.8841979141399,62.3870672906111,56.01943403734,94.9083118085939,39.5177985779523,30.2991755401165,51.6775525622704,62.8581430124046,76.9470831914127,74.952587331679,53.2213944734146,59.6673537093014,55.6986586769447,54.9891666425156,30.4814723260623,28.2929802288902,47.5445043046316,32.640233031894,31.0858786820381,25.5211695327961,269.115838563832,176.581787862379,148.680743288559,288.233429135197,269.802966558586,224.305783100393,30.970617221992,35.8874336517082,36.1587101758513,145.524790048735,131.90521961017,161.029971944368,183.541824726124,70.9731157640588,79.0639104007344,55.0326947869375,88.494181325384,87.7204815761831,60.1987080324116,113.467242215748,153.670283498678,81.9381666481371,74.5877280773566,73.5244428067168,85.7276666134904,71.1435836888911,125.536010560755,113.719631695202,114.387298506322,113.548441886475,147.924047548799,45.1049813541878,48.3321259227453,51.9502654537914,132.542056763365,113.305561508178,54.3859148514396,49.5521085164282,58.8300023430413,151.959915779156,143.903630022007,131.179979400832,95.8813311798509,92.9514459000482,78.6579189540708,169.74326339284,155.322480368744,136.143238769138,81.612118176206,80.7247430130914,80.8973594881805,52.8568829465625,46.6276525858867,77.1039539946463,67.9734862815295,36.7184520202185,56.129131930333,52.6318898132612,29.5697745484241,80.1937638952303,19.2586264513205,25.4590284510811,16.2536204274756,69.9991796290102,19.2489716121477,35.6727335589304,42.6640021891999,42.432244038198,36.4838206284142,36.9032844860792,61.2025595294161,40.9121856162531,84.6120192669501,51.1781713960101,57.5439754009947,58.1151053085267,68.8802467325485,69.0245710886587,96.7632753238501,120.878339222109,55.670752414166,98.191771266436,54.8389621321717,80.1654712011229,66.9127849326607,72.6927868750676,81.1002807721986,93.2037845319875,57.4778374219331,36.7832432233175,47.9922184794726,34.9443124450928,115.039211062904,123.067662158211,70.2407828310912,93.1698356230602,105.099052962766,121.140429978224,106.754751098585,60.0852246716866,68.7970547473814,55.0935613385411,54.5044406745968,34.6120378280792,45.2907145733942,44.4753460619213,41.4438249048216,48.2378778982915,49.5800097502369,55.1903157656803,60.7952921236687,26.5148631307396,24.9620025821521,31.3193001011829,40.5512104991013,44.2095126268701,44.5762773148373,57.8247803306321,37.0203736282397,34.4084461783485,30.8817488537658,32.9629659298887,37.6968906014613,42.6837429165595,43.9351429964876,41.667073462997,46.0428302288925,48.131339220862,52.5526715135922,58.483601505117,72.9783389794809,59.241545968853,75.845368404542,92.4995116918214,97.0767916504207,71.1342373543004,93.5418738759791,101.9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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:67808
|HGNC=
|MCL_coexpression_id=3001
|TSSclassifier=NA
|UniProt=uniprot:Q9DBS2
|association_with_transcript=0bp_to_ENSMUST00000030896,ENSMUST00000134492,NM_026388,uc008wbm.1_5end
|cluster_id=chr4:153534744..153534805,-
|description=CAGE_peak_1_at_Tprgl_5end
|id=chr4:153534744..153534805,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.03e-13!73;UBERON:0005743!3.03e-13!73;UBERON:0000073!1.10e-12!75;UBERON:0001016!1.10e-12!75;UBERON:0001049!2.72e-12!52;UBERON:0005068!2.72e-12!52;UBERON:0006241!2.72e-12!52;UBERON:0007135!2.72e-12!52;UBERON:0000955!8.93e-12!50;UBERON:0006238!8.93e-12!50;UBERON:0002616!9.28e-12!49;UBERON:0004121!2.79e-11!102;UBERON:0000924!2.79e-11!102;UBERON:0006601!2.79e-11!102;UBERON:0004111!2.35e-09!122;UBERON:0000033!5.32e-09!63;UBERON:0002346!8.10e-09!71;UBERON:0003075!8.10e-09!71;UBERON:0007284!8.10e-09!71;UBERON:0002020!3.50e-08!34;UBERON:0000025!4.02e-08!114;UBERON:0000062!8.27e-08!269;UBERON:0003080!1.06e-07!40;UBERON:0002780!2.91e-07!39;UBERON:0001890!2.91e-07!39;UBERON:0006240!2.91e-07!39;UBERON:0000480!3.99e-07!308;UBERON:0000467!3.99e-07!308
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.71e-13,54;UBERON:0001017,3.03e-13,73;UBERON:0001016,1.10e-12,75;UBERON:0001049,2.72e-12,52;UBERON:0005068,2.72e-12,52;UBERON:0006241,2.72e-12,52;UBERON:0007135,2.72e-12,52;UBERON:0004121,1.08e-10,95;UBERON:0000924,1.08e-10,95;UBERON:0006601,1.08e-10,95;UBERON:0000955,3.54e-10,47;UBERON:0006238,3.54e-10,47;UBERON:0002616,3.72e-10,46;UBERON:0004111,2.35e-09,122;UBERON:0010314,3.18e-09,92;UBERON:0002346,2.30e-08,64;UBERON:0003075,2.30e-08,64;UBERON:0007284,2.30e-08,64;UBERON:0002020,3.50e-08,34;UBERON:0000025,4.02e-08,114;UBERON:0010371,4.71e-08,73;UBERON:0003080,1.06e-07,40;UBERON:0000923,2.13e-07,291;UBERON:0010316,2.13e-07,291;UBERON:0005291,2.13e-07,291;UBERON:0006598,2.13e-07,291;UBERON:0010317,2.13e-07,291;UBERON:0002532,2.13e-07,291;UBERON:0002780,2.91e-07,39;UBERON:0001890,2.91e-07,39;UBERON:0006240,2.91e-07,39
|phase1_expression=57.3332872635162,69.0971307125935,85.5398570052328,91.6466560259695,99.6782502593231,49.6922644859194,44.6200143537454,97.1007392280654,56.59706630497,57.5798734752104,45.5439795479843,44.353320401407,88.8531788342958,90.3052756988243,87.2747575957036,103.667336903591,167.195288872627,60.8841979141399,62.3870672906111,56.01943403734,94.9083118085939,39.5177985779523,30.2991755401165,51.6775525622704,62.8581430124046,76.9470831914127,74.952587331679,53.2213944734146,59.6673537093014,55.6986586769447,54.9891666425156,30.4814723260623,28.2929802288902,47.5445043046316,32.640233031894,31.0858786820381,25.5211695327961,269.115838563832,176.581787862379,148.680743288559,288.233429135197,269.802966558586,224.305783100393,30.970617221992,35.8874336517082,36.1587101758513,145.524790048735,131.90521961017,161.029971944368,183.541824726124,70.9731157640588,79.0639104007344,55.0326947869375,88.494181325384,87.7204815761831,60.1987080324116,113.467242215748,153.670283498678,81.9381666481371,74.5877280773566,73.5244428067168,85.7276666134904,71.1435836888911,125.536010560755,113.719631695202,114.387298506322,113.548441886475,147.924047548799,45.1049813541878,48.3321259227453,51.9502654537914,132.542056763365,113.305561508178,54.3859148514396,49.5521085164282,58.8300023430413,151.959915779156,143.903630022007,131.179979400832,95.8813311798509,92.9514459000482,78.6579189540708,169.74326339284,155.322480368744,136.143238769138,81.612118176206,80.7247430130914,80.8973594881805,52.8568829465625,46.6276525858867,77.1039539946463,67.9734862815295,36.7184520202185,56.129131930333,52.6318898132612,29.5697745484241,80.1937638952303,19.2586264513205,25.4590284510811,16.2536204274756,69.9991796290102,19.2489716121477,35.6727335589304,42.6640021891999,42.432244038198,36.4838206284142,36.9032844860792,61.2025595294161,40.9121856162531,84.6120192669501,51.1781713960101,57.5439754009947,58.1151053085267,68.8802467325485,69.0245710886587,96.7632753238501,120.878339222109,55.670752414166,98.191771266436,54.8389621321717,80.1654712011229,66.9127849326607,72.6927868750676,81.1002807721986,93.2037845319875,57.4778374219331,36.7832432233175,47.9922184794726,34.9443124450928,115.039211062904,123.067662158211,70.2407828310912,93.1698356230602,105.099052962766,121.140429978224,106.754751098585,60.0852246716866,68.7970547473814,55.0935613385411,54.5044406745968,34.6120378280792,45.2907145733942,44.4753460619213,41.4438249048216,48.2378778982915,49.5800097502369,55.1903157656803,60.7952921236687,26.5148631307396,24.9620025821521,31.3193001011829,40.5512104991013,44.2095126268701,44.5762773148373,57.8247803306321,37.0203736282397,34.4084461783485,30.8817488537658,32.9629659298887,37.6968906014613,42.6837429165595,43.9351429964876,41.667073462997,46.0428302288925,48.131339220862,52.5526715135922,58.483601505117,72.9783389794809,59.241545968853,75.845368404542,92.4995116918214,97.0767916504207,71.1342373543004,93.5418738759791,101.990625053602,54.1278261115036,76.9875764352249,28.8251117663263,28.7939138222566,34.1387907634845,27.8353716455722,28.0340099226446,25.5734750421601,42.2300889969881,65.9595395546871,57.3152362439558,55.7964163536598,55.3098992274399,58.6841902228552,49.4350674759822,67.2189335110299,73.0848472843528,37.174908586804,30.1616073289684,33.8123207019241,35.8426337007753,42.6695471768777,56.1086559122548,60.0747102680444,63.9151940751677,63.8984822314395,77.2466246150471,38.8352941484165,52.2225180891374,69.3853252749607,74.6542213117714,86.0126914687252,93.3355608241853,93.9569393073439,49.1960395040886,60.3143043603132,45.3026331760334,28.7536413054709,39.8190814005299,48.0538016596423,50.7683544673695,43.0553792452589,55.4810049567872,102.538020542466,37.7087909423265,32.7559602648472,36.3254483558903,34.2647762501213,52.5969648367301,71.1750486249181,121.373128967551,75.1919637386531,80.3916823425053,98.2241374930121,105.036384732788,101.884139300878,116.297843099535,43.729472342389,47.3197944922277,39.3411418415229,53.5317287831181,122.500100160685,111.233890576001,31.311574566945,98.7161325369098,43.2246260600272,37.4821194524773,60.1031279674509,41.5805708437441,51.466493713033,48.1230102341015,57.8879303395099,64.5885445983999,58.897878914032,65.8708698664704,54.3630526347669,50.5706314415005,56.6846618550445,58.0694832863325,51.7706039525855,26.220308704738,35.0695326079111,34.8919397548412,47.5436047538044,47.6524479313088,61.2475054808684,49.8041209384183,48.8401408387068,65.4196088927139,39.0048851727495,58.7872596514665,91.2378143420152,42.8545403794518,55.1067992914534,60.2287068438774,56.0395138309584,59.0400786262854,68.2878435498802,100.473433207818,49.9850738175703,70.7519116685159,69.245916989258,62.3270036118795,75.4038872669879,51.7484895883577,72.2202681218976,64.0149509005739,62.9598607120478,109.957204092232,82.1888936637671,46.6434321596883,53.8916074645861,113.962916487838,84.2036442761515,100.66239621087,70.54104844745,73.6144639222441,87.2041834705914,100.240414891587,34.006119309972,33.3443926088032,35.9657784936598,54.3629569637619,55.9008163190215,69.994595773722,69.0156355306555,87.1647286806819,92.6747059036319,59.6485740563449,189.964520336572,32.7441235836314,44.8392509138735,36.9457257853691,51.1472900971815,42.2390313726945,43.6568927762205,42.4466294591277,36.281333171296,78.273255147626,114.059882478115,60.0421129193539,37.3014396133902,32.3539515069206,34.2990972661379,30.4345382634718,43.3125353423157,50.9628705964668,46.6698905871664,38.4682174302442,44.3523614732099,49.6064830873255,57.7925232786732,63.1149681160561,73.6324483743884,82.5298596359369,10.8773117153292,13.8159339178593,22.3286539764224,92.9241947294836,75.4483551313752,56.4107002743176,85.3186148734682,88.276690310224,77.9357542811552,84.2395182808134,74.4764167471216,73.0376024960672,104.132543005138,81.5825409180877,105.303510036162,93.6668102706379,105.129038884335,89.5725339330648,32.2778650986789,39.5034624667021,43.3663358615501,44.9747426576344,57.4340065600672,59.5652967378046,42.6713717379101,42.2371867339733,44.9286893428541,43.4639204233732,38.5288535833164,40.1774107152342,43.7305839884351,49.491442808964,45.7186332886682,46.2004880544581,46.1219617260525,51.6996710842729,42.0327618819373,39.4493105960185,41.1443102862498,39.0446773550542,38.8650989614133,37.3540290745084,39.8082679156849,41.4611578669215,45.9149211910659,38.1451081584872,42.5066876337547,37.0353899294107,41.2849863072126,47.6761694697727,42.5600284896477,46.6359891969758,42.6323610268322,60.9537810168588,53.8042699424439,50.2798266473018,66.3770512278887,74.3393082432767,70.0240863573673
|short_description=p1@Tprgl
}}

Revision as of 06:35, 5 August 2015

Short description:p1@Tprgl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tprgl_5end
Coexpression cluster:MCL_coexpression_mm9:3001
Association with transcript: 0bp_to_ENSMUST00000030896, ENSMUST00000134492, NM_026388, uc008wbm.1_5end
EntrezGene:67808
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tprgl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G757.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I569.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I685.54
CD326+ enterocyte, pool1.CNhs13542.11848-124I391.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I499.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I749.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I844.62
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E997.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E756.60
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F257.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E645.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F144.35
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E488.85
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E890.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A187.27
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3103.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5167.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A260.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A462.39
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A656.02
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A394.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H239.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I930.30
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D151.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D262.86
GP2+ M cell, pool1.CNhs13228.11845-124H976.95
GP2+ M cell, pool2.CNhs13231.11846-124I174.95
GP2+ M cell, pool3.CNhs13240.11847-124I253.22
Ileum epithelium, pool1.CNhs13199.10252-104B959.67
Ileum epithelium, pool2.CNhs13232.10253-104C155.70
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C854.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I330.48
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G628.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F532.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F631.09
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8269.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1176.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3148.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9288.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2269.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4224.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D830.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D935.89
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B336.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7145.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2131.91
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8161.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3183.54
Mouse Astrocytes, donor2.CNhs12078.11552-120C470.97
Mouse Astrocytes, donor3.CNhs12107.11633-122C479.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A255.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I988.49
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A187.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C160.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1113.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5153.67
Mouse Granule cells, donor1.CNhs12131.11713-123C381.94
Mouse Granule cells, donor2.CNhs12357.11731-123E374.59
Mouse Granule cells, donor3.CNhs12108.11636-122C773.52
Mouse Meningeal cells, donor1.CNhs12132.11716-123C685.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D171.14
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7125.54
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7113.72
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2114.39
Mouse Microglia, donor1.CNhs12629.11718-123C8113.55
Mouse Microglia, donor2.CNhs12634.11736-123E8147.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D545.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F548.33
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D951.95
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1132.54
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5113.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D254.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F249.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D658.83
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3151.96
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3143.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7131.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D495.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F492.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D878.66
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4169.74
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5155.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6136.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D681.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F680.72
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E180.90
Mouse Schwann, donor1.CNhs12507.11728-123D952.86
Mouse Schwann, donor2.CNhs12573.11746-123F946.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G377.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F767.97
Mouse hepatocyte, donor1.CNhs13078.11714-123C436.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C856.13
Mouse hepatocyte, donor6.CNhs13090.11822-124F452.63
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A780.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G670.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G142.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G236.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G336.90
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B661.20
accessory axillary lymph node, adult.CNhs10475.1063-29H940.91
adrenal gland, adult.CNhs10508.49-24D784.61
adrenal gland, embryo E14.CNhs11038.406-44C551.18
adrenal gland, embryo E16.CNhs11004.1254-43D657.54
adrenal gland, embryo E17.CNhs11043.1263-45I158.12
adrenal gland, embryo E18.CNhs11026.1262-18F568.88
adrenal gland, neonate N00.CNhs11191.1311-23C169.02
adrenal gland, neonate N25.CNhs11223.1377-27I396.76
amnion, adult pregnant day17.5.CNhs10488.583-22A8120.88
aorta, adult.CNhs10498.46-23H155.67
bone (os femoris), adult.CNhs10483.56-12G298.19
bone (os femoris), neonate N02.CNhs11227.1985-43F554.84
bone (os femoris), neonate N16.CNhs11225.1525-43A680.17
bone (os femoris), neonate N20.CNhs11195.1350-25C366.91
cecum, adult.CNhs10467.37-13H472.69
cerebellum, adult.CNhs10494.15-8B281.10
cerebellum, neonate N30.CNhs11135.1395-42I293.20
colon, adult.CNhs10468.36-18H757.48
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C736.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D147.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D434.94
corpora quadrigemina, adult.CNhs10501.16-22A4115.04
corpus striatum, adult.CNhs10487.19-21D8123.07
corpus striatum, neonate N00.CNhs11226.630-43F170.24
cortex, adult.CNhs10473.12-14D593.17
cortex, neonate N30.CNhs11107.1392-42F2105.10
diencephalon, adult.CNhs10482.20-12F2121.14
diencephalon, neonate N30.CNhs11201.1388-42B2106.75
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B160.09
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A268.80
epididymis, adult.CNhs10490.58-23B255.09
eyeball, adult.CNhs10484.31-12G454.50
eyeball, embryo E12.CNhs11016.345-16C634.61
eyeball, embryo E14.CNhs10521.399-16E245.29
eyeball, embryo E15.CNhs10593.426-16C944.48
eyeball, embryo E17.CNhs11023.1261-18D441.44
eyeball, neonate N00.CNhs11207.633-15C648.24
eyeball, neonate N01.CNhs11140.1532-43E749.58
eyeball, neonate N02.CNhs11205.1551-44G855.19
eyeball, neonate N16.CNhs11188.777-19A260.80
forelimb, embryo E11.CNhs10596.335-25E226.51
forelimb, embryo E12.CNhs10600.359-14H224.96
forelimb, embryo E13.CNhs10589.384-1E231.32
forelimb, embryo E14.CNhs10577.413-26A840.55
forelimb, embryo E15.CNhs11007.437-20E744.21
forelimb, embryo E17.CNhs10598.1517-43C444.58
forelimb, embryo E18.CNhs11008.1520-43B557.82
gonad, embryo E13.CNhs11044.1564-45I637.02
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C834.41
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D230.88
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D532.96
heart, embryo E11.CNhs10586.331-24E937.70
heart, embryo E12.CNhs11015.353-12F542.68
heart, embryo E13.CNhs11013.376-3I943.94
heart, embryo E14.CNhs10597.403-26D441.67
heart, embryo E15.CNhs11017.431-16C846.04
heart, embryo E16.CNhs11021.457-17C648.13
heart, embryo E17.CNhs11025.479-18E552.55
heart, embryo E18.CNhs11030.1283-20G358.48
heart, neonate N00.CNhs11213.639-21E372.98
heart, neonate N03.CNhs11221.1349-25I259.24
heart, neonate N10.CNhs11118.749-24G175.85
heart, neonate N16.CNhs11209.782-15G192.50
heart, neonate N20.CNhs11127.821-26I697.08
heart, neonate N25.CNhs11196.1351-25D371.13
heart, neonate N30.CNhs11202.1390-42D293.54
hippocampus, adult.CNhs10478.13-16E8101.99
hippocampus, neonate N00.CNhs11228.627-43G154.13
intestinal mucosa, adult.CNhs10506.860-29I376.99
intestine, adult.CNhs10496.178-9A328.83
intestine, embryo E12.CNhs11019.1251-16I528.79
intestine, embryo E13.CNhs11010.381-16D534.14
intestine, embryo E15.CNhs10602.976-16D827.84
intestine, embryo E16.CNhs10585.463-22H428.03
intestine, embryo E17.CNhs10582.482-18D325.57
intestine, embryo E18.CNhs10526.1289-20F742.23
intestine, neonate N00.CNhs11126.644-26D165.96
intestine, neonate N01.CNhs11192.1322-23E957.32
intestine, neonate N06.CNhs11102.688-20B855.80
intestine, neonate N07.CNhs11095.720-20F255.31
intestine, neonate N10.CNhs11098.755-23A558.68
intestine, neonate N20.CNhs11187.827-18D149.44
intestine, neonate N25.CNhs11121.1352-25E367.22
intestine, neonate N30.CNhs11131.1384-42G173.08
kidney, embryo E14.CNhs10606.411-4I937.17
kidney, embryo E15.CNhs10997.434-16F830.16
kidney, embryo E16.CNhs10584.464-22A533.81
kidney, embryo E17.CNhs11028.483-18I235.84
kidney, embryo E18.CNhs11001.1288-20C742.67
kidney, neonate N00.CNhs11214.646-21G756.11
kidney, neonate N10.CNhs11206.758-6D560.07
kidney, neonate N20.CNhs11113.832-19I163.92
kidney, neonate N25.CNhs11122.1353-25F363.90
kidney, neonate N30.CNhs11203.1385-42H177.25
liver, adult pregnant day01.CNhs10466.508-5B238.84
liver, embryo E12.CNhs10601.355-15F852.22
liver, embryo E13.CNhs10524.378-3H669.39
liver, embryo E14.CNhs10594.409-16E174.65
liver, embryo E15.CNhs10520.433-16D786.01
liver, embryo E16.CNhs10523.462-17F593.34
liver, embryo E17.CNhs10510.481-18A393.96
liver, embryo E18.CNhs10579.499-43G449.20
liver, neonate N00.CNhs11117.641-24F460.31
liver, neonate N03.CNhs11123.1345-25G245.30
liver, neonate N06.CNhs11101.684-20A828.75
liver, neonate N07.CNhs11103.716-20H239.82
liver, neonate N10.CNhs11115.751-24B948.05
liver, neonate N20.CNhs11220.823-25A350.77
liver, neonate N25.CNhs11198.1368-26H143.06
liver, neonate N30.CNhs11106.1382-42D155.48
lung, adult.CNhs10474.28-22B1102.54
lung, embryo E12.CNhs10522.354-16G237.71
lung, embryo E14.CNhs10604.404-26F832.76
lung, embryo E15.CNhs11020.432-17C536.33
lung, embryo E16.CNhs10998.458-17B634.26
lung, embryo E17.CNhs10605.480-44A652.60
lung, embryo E18.CNhs10583.1287-20I671.18
lung, neonate N00.CNhs11224.640-42C6121.37
lung, neonate N06.CNhs11212.683-20E575.19
lung, neonate N07.CNhs11111.715-19A380.39
lung, neonate N10.CNhs11219.750-23E698.22
lung, neonate N20.CNhs11109.822-18A4105.04
lung, neonate N25.CNhs11119.1359-25C7101.88
lung, neonate N30.CNhs11133.1394-42H2116.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A143.73
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A147.32
mammary gland, adult lactating day02.CNhs10480.595-22B639.34
mammary gland, adult pregnant day19.CNhs10476.588-5H253.53
medulla oblongata, adult.CNhs10477.17-12C2122.50
medulla oblongata, neonate N30.CNhs11200.1396-42A3111.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C731.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C298.72
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.22
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E237.48
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E360.10
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D741.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D851.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D948.12
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D457.89
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D564.59
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D658.90
olfactory brain, adult.CNhs10489.18-22I965.87
ovary, adult.CNhs10507.91-2I754.36
ovary, embryo E18.CNhs11040.505-44H750.57
ovary, neonate N00.CNhs11217.1299-22I456.68
oviduct, adult pregnant day01.CNhs10500.988-6G658.07
pancreas, adult.CNhs10486.34-16E451.77
pancreas, embryo E14.CNhs11012.405-44F426.22
pancreas, embryo E15.CNhs11042.1556-45F235.07
pancreas, embryo E16.CNhs11003.460-26E534.89
pancreas, embryo E17.CNhs10599.1558-45G347.54
pancreas, embryo E18.CNhs10580.1535-43I747.65
pancreas, neonate N00.CNhs11105.645-26G961.25
pancreas, neonate N01.CNhs11138.1531-43D749.80
pancreas, neonate N02.CNhs11139.1539-43D848.84
pancreas, neonate N16.CNhs11136.787-43B665.42
pancreas, neonate N25.CNhs11094.1555-45E239.00
pancreas, neonate N30.CNhs11182.1548-44H558.79
pituitary gland, adult.CNhs10493.21-1G891.24
pituitary gland, embryo E12.CNhs11018.346-16E642.85
pituitary gland, embryo E13.CNhs11009.370-44C755.11
pituitary gland, embryo E14.CNhs11037.398-44A560.23
pituitary gland, embryo E15.CNhs10592.427-16B956.04
pituitary gland, embryo E16.CNhs11036.449-43F659.04
pituitary gland, embryo E17.CNhs11039.1265-44F568.29
pituitary gland, neonate N00.CNhs11190.1308-22E9100.47
placenta, adult pregnant day10.CNhs10472.539-13I749.99
placenta, adult pregnant day17.CNhs10464.577-18G370.75
prostate, adult.CNhs10470.859-1F869.25
skin, adult.CNhs10492.30-1C362.33
skin, neonate N00.CNhs11124.650-25G475.40
skin, neonate N03.CNhs11215.662-22H351.75
skin, neonate N06.CNhs11097.693-20I572.22
skin, neonate N10.CNhs11108.762-6C464.01
small intestine, neonate N16.CNhs11114.790-21I162.96
spinal cord, adult.CNhs10505.24-13C9109.96
spleen, adult.CNhs10465.25-2G282.19
spleen, embryo E16.CNhs11035.461-43C146.64
spleen, embryo E18.CNhs11011.1271-21F253.89
spleen, neonate N10.CNhs11116.752-24D1113.96
spleen, neonate N20.CNhs11112.824-19H184.20
spleen, neonate N25.CNhs11099.1354-25G3100.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C670.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C973.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D387.20
stomach, adult.CNhs10503.33-1H6100.24
stomach, embryo E12.CNhs10588.356-43E334.01
stomach, embryo E15.CNhs10603.1252-16G833.34
stomach, embryo E16.CNhs11022.459-17D435.97
stomach, embryo E17.CNhs11006.1035-18D554.36
stomach, embryo E18.CNhs10999.1286-20C655.90
stomach, neonate N03.CNhs11193.1340-24B869.99
stomach, neonate N07.CNhs11210.718-18A969.02
stomach, neonate N25.CNhs11104.1355-25E487.16
stomach, neonate N30.CNhs11134.1386-42I192.67
submandibular gland, adult.CNhs10469.59-29C159.65
testis, adult.CNhs10504.57-7G5189.96
testis, embryo E13.CNhs11031.389-23F532.74
testis, embryo E15.CNhs11034.443-27C544.84
testis, embryo E16.CNhs11033.470-26G536.95
testis, embryo E17.CNhs11029.486-18I551.15
testis, embryo E18.CNhs11027.503-18G542.24
testis, neonate N00.CNhs11189.1300-22B743.66
testis, neonate N07.CNhs11222.726-26I442.45
testis, neonate N10.CNhs11204.763-44D936.28
testis, neonate N20.CNhs11110.839-18H378.27
testis, neonate N30.CNhs11130.1391-42E2114.06
thymus, adult.CNhs10471.38-12B560.04
thymus, embryo E14.CNhs11041.402-44I437.30
thymus, embryo E15.CNhs11005.430-45I232.35
thymus, embryo E16.CNhs11002.456-26C534.30
thymus, embryo E17.CNhs10581.478-18C130.43
thymus, embryo E18.CNhs10595.1273-19G443.31
thymus, neonate N02.CNhs11181.1541-43F850.96
thymus, neonate N03.CNhs11137.2104-43C746.67
thymus, neonate N06.CNhs11197.681-26C438.47
thymus, neonate N07.CNhs11211.713-19D344.35
thymus, neonate N10.CNhs11194.748-24E449.61
thymus, neonate N20.CNhs11186.820-7A257.79
thymus, neonate N25.CNhs11125.1362-25G763.11
thymus, neonate N30.CNhs11132.1393-42G273.63
tongue, adult.CNhs10499.32-1B482.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.82
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G522.33
urinary bladder, adult.CNhs10481.879-12E492.92
uterus, adult pregnant day19.CNhs10497.590-15F575.45
uterus, adult.CNhs10509.92-27E556.41
vagina, adult.CNhs10502.89-27D585.32
vesicular gland, adult.CNhs10491.51-27F888.28
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A177.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A284.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A374.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D773.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4104.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A581.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6105.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A793.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8105.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A989.57
whole body, embryo E11.CNhs11014.324-5I832.28
whole body, embryo E12.CNhs10587.857-27C939.50
whole body, embryo E13.CNhs10512.372-23H243.37
whole body, embryo E14.5.CNhs10578.420-27D244.97
whole body, embryo E14.CNhs10519.395-14B157.43
whole body, embryo E16.CNhs10514.453-14F259.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G542.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G542.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G544.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G543.46
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G538.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G540.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G543.73
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G549.49
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G545.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G546.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G546.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G551.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G542.03
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G539.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G541.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G539.04
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G538.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G537.35
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G539.81
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G541.46
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G545.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G538.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G542.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G537.04
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G541.28
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G547.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G542.56
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G546.64
whole body, embryo E17.5.CNhs10513.490-9F942.63
whole body, embryo E17.CNhs10517.475-3I560.95
whole body, embryo E18.CNhs10516.493-3B353.80
whole body, neonate N00.CNhs10525.657-19C250.28
whole body, neonate N01.CNhs10576.659-23C666.38
whole body, neonate N06.CNhs10515.692-21D174.34
whole body, neonate N10.CNhs10518.761-6B470.02





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.71e-1354
central nervous system3.03e-1373
nervous system1.10e-1275
neural tube2.72e-1252
neural rod2.72e-1252
future spinal cord2.72e-1252
neural keel2.72e-1252
ectoderm-derived structure1.08e-1095
ectoderm1.08e-1095
presumptive ectoderm1.08e-1095
brain3.54e-1047
future brain3.54e-1047
regional part of brain3.72e-1046
anatomical conduit2.35e-09122
structure with developmental contribution from neural crest3.18e-0992
neurectoderm2.30e-0864
neural plate2.30e-0864
presumptive neural plate2.30e-0864
gray matter3.50e-0834
tube4.02e-08114
ecto-epithelium4.71e-0873
anterior neural tube1.06e-0740
germ layer2.13e-07291
germ layer / neural crest2.13e-07291
embryonic tissue2.13e-07291
presumptive structure2.13e-07291
germ layer / neural crest derived structure2.13e-07291
epiblast (generic)2.13e-07291
regional part of forebrain2.91e-0739
forebrain2.91e-0739
future forebrain2.91e-0739
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