FFCP PHASE1:Mm9::chr11:105516897..105516931,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=20|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:105516897..105516931,+|id=chr11:105516897..105516931,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.55e-18,3;CL:0002614,3.50e-18,3;CL:0000117,6.13e-12,23;CL:0000337,6.13e-12,23;CL:0000540,3.87e-08,33;CL:0000047,3.87e-08,33;CL:0000031,3.87e-08,33;CL:0000404,3.87e-08,33;CL:0000393,8.68e-07,39;CL:0000211,8.68e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.40e-12!52;UBERON:0005068!1.40e-12!52;UBERON:0006241!1.40e-12!52;UBERON:0007135!1.40e-12!52;UBERON:0000073!4.15e-12!75;UBERON:0001016!4.15e-12!75;UBERON:0000033!7.38e-12!63;UBERON:0001017!8.98e-12!73;UBERON:0005743!8.98e-12!73;UBERON:0002616!2.47e-11!49;UBERON:0000955!5.61e-11!50;UBERON:0006238!5.61e-11!50;UBERON:0002298!6.15e-11!6;UBERON:0002346!1.20e-10!71;UBERON:0003075!1.20e-10!71;UBERON:0007284!1.20e-10!71;UBERON:0004121!3.70e-10!102;UBERON:0000924!3.70e-10!102;UBERON:0006601!3.70e-10!102;UBERON:0003076!6.13e-08!12;UBERON:0003057!6.13e-08!12;UBERON:0002950!1.10e-07!4;UBERON:0001891!1.10e-07!4;UBERON:0009616!1.10e-07!4;UBERON:0002020!2.22e-07!34;UBERON:0003056!5.18e-07!49;UBERON:0003080!7.31e-07!40;UBERON:0002240!8.25e-07!6;UBERON:0005174!8.25e-07!6;UBERON:0001137!8.25e-07!6;UBERON:0007811!9.97e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002950,5.65e-24,4;UBERON:0001891,5.65e-24,4;UBERON:0009616,5.65e-24,4;UBERON:0010286,5.65e-24,4;UBERON:0000073,7.76e-20,54;UBERON:0004684,1.55e-18,3;UBERON:0002275,1.55e-18,3;UBERON:0002038,3.50e-18,3;UBERON:0009663,3.50e-18,3;UBERON:0009661,3.50e-18,3;UBERON:0000125,3.50e-18,3;UBERON:0002308,3.50e-18,3;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0001049,6.38e-15,52;UBERON:0005068,6.38e-15,52;UBERON:0006241,6.38e-15,52;UBERON:0007135,6.38e-15,52;UBERON:0001896,1.38e-13,2;UBERON:0002298,1.38e-13,2;UBERON:0005290,1.38e-13,2;UBERON:0010096,1.38e-13,2;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0002346,7.55e-12,64;UBERON:0003075,7.55e-12,64;UBERON:0007284,7.55e-12,64;UBERON:0002420,7.99e-12,8;UBERON:0007245,7.99e-12,8;UBERON:0010009,7.99e-12,8;UBERON:0010011,7.99e-12,8;UBERON:0000454,7.99e-12,8;UBERON:0002616,1.13e-11,46;UBERON:0000955,2.13e-11,47;UBERON:0006238,2.13e-11,47;UBERON:0010371,3.35e-10,73;UBERON:0003080,1.69e-08,40;UBERON:0003076,2.27e-08,12;UBERON:0003057,2.27e-08,12;UBERON:0010314,9.01e-08,92;UBERON:0002259,1.83e-07,1;UBERON:0002314,1.83e-07,1;UBERON:0004061,1.83e-07,1;UBERON:0006777,1.83e-07,1;UBERON:0005882,1.83e-07,1;UBERON:0003056,8.82e-07,49|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.662605622854841,0,0,0,5.50579404996943,4.34136949489638,5.52983519722476,0,0,0,5.58365998002762,2.8138130501584,2.13917546887534,0.294628585473668,0.569486723196412,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0,0,0,9.58660092190865,1.37250180845588,0,0.521472960576829,0.511430914660661,3.94797284663164,2.27137768294861,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,13.1651483789989,13.83097901788,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.987294123612726,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0.291480836629851,12.4234952347041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.38581844092741,0,0,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p@chr11:105516897..105516931,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:105516897..105516931,+ | |||
|description=CAGE_peak_at_chr11:105516897..105516931,+ | |||
|id=chr11:105516897..105516931,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.55e-18,3;CL:0002614,3.50e-18,3;CL:0000117,6.13e-12,23;CL:0000337,6.13e-12,23;CL:0000540,3.87e-08,33;CL:0000047,3.87e-08,33;CL:0000031,3.87e-08,33;CL:0000404,3.87e-08,33;CL:0000393,8.68e-07,39;CL:0000211,8.68e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.40e-12!52;UBERON:0005068!1.40e-12!52;UBERON:0006241!1.40e-12!52;UBERON:0007135!1.40e-12!52;UBERON:0000073!4.15e-12!75;UBERON:0001016!4.15e-12!75;UBERON:0000033!7.38e-12!63;UBERON:0001017!8.98e-12!73;UBERON:0005743!8.98e-12!73;UBERON:0002616!2.47e-11!49;UBERON:0000955!5.61e-11!50;UBERON:0006238!5.61e-11!50;UBERON:0002298!6.15e-11!6;UBERON:0002346!1.20e-10!71;UBERON:0003075!1.20e-10!71;UBERON:0007284!1.20e-10!71;UBERON:0004121!3.70e-10!102;UBERON:0000924!3.70e-10!102;UBERON:0006601!3.70e-10!102;UBERON:0003076!6.13e-08!12;UBERON:0003057!6.13e-08!12;UBERON:0002950!1.10e-07!4;UBERON:0001891!1.10e-07!4;UBERON:0009616!1.10e-07!4;UBERON:0002020!2.22e-07!34;UBERON:0003056!5.18e-07!49;UBERON:0003080!7.31e-07!40;UBERON:0002240!8.25e-07!6;UBERON:0005174!8.25e-07!6;UBERON:0001137!8.25e-07!6;UBERON:0007811!9.97e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,5.65e-24,4;UBERON:0001891,5.65e-24,4;UBERON:0009616,5.65e-24,4;UBERON:0010286,5.65e-24,4;UBERON:0000073,7.76e-20,54;UBERON:0004684,1.55e-18,3;UBERON:0002275,1.55e-18,3;UBERON:0002038,3.50e-18,3;UBERON:0009663,3.50e-18,3;UBERON:0009661,3.50e-18,3;UBERON:0000125,3.50e-18,3;UBERON:0002308,3.50e-18,3;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0001049,6.38e-15,52;UBERON:0005068,6.38e-15,52;UBERON:0006241,6.38e-15,52;UBERON:0007135,6.38e-15,52;UBERON:0001896,1.38e-13,2;UBERON:0002298,1.38e-13,2;UBERON:0005290,1.38e-13,2;UBERON:0010096,1.38e-13,2;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0002346,7.55e-12,64;UBERON:0003075,7.55e-12,64;UBERON:0007284,7.55e-12,64;UBERON:0002420,7.99e-12,8;UBERON:0007245,7.99e-12,8;UBERON:0010009,7.99e-12,8;UBERON:0010011,7.99e-12,8;UBERON:0000454,7.99e-12,8;UBERON:0002616,1.13e-11,46;UBERON:0000955,2.13e-11,47;UBERON:0006238,2.13e-11,47;UBERON:0010371,3.35e-10,73;UBERON:0003080,1.69e-08,40;UBERON:0003076,2.27e-08,12;UBERON:0003057,2.27e-08,12;UBERON:0010314,9.01e-08,92;UBERON:0002259,1.83e-07,1;UBERON:0002314,1.83e-07,1;UBERON:0004061,1.83e-07,1;UBERON:0006777,1.83e-07,1;UBERON:0005882,1.83e-07,1;UBERON:0003056,8.82e-07,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.662605622854841,0,0,0,5.50579404996943,4.34136949489638,5.52983519722476,0,0,0,5.58365998002762,2.8138130501584,2.13917546887534,0.294628585473668,0.569486723196412,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0,0,0,9.58660092190865,1.37250180845588,0,0.521472960576829,0.511430914660661,3.94797284663164,2.27137768294861,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,13.1651483789989,13.83097901788,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.987294123612726,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0.291480836629851,12.4234952347041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.38581844092741,0,0,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr11:105516897..105516931,+ | |||
}} |
Latest revision as of 07:07, 5 August 2015
Short description: | p@chr11:105516897..105516931, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:105516897..105516931, + |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.55e-18 | 3 |
neuron of the substantia nigra | 3.50e-18 | 3 |
CNS neuron (sensu Vertebrata) | 6.13e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.13e-12 | 23 |
neuron | 3.87e-08 | 33 |
neuronal stem cell | 3.87e-08 | 33 |
neuroblast | 3.87e-08 | 33 |
electrically signaling cell | 3.87e-08 | 33 |
electrically responsive cell | 8.68e-07 | 39 |
electrically active cell | 8.68e-07 | 39 |