FFCP PHASE1:Mm9::chr7:57167425..57167443,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=353|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:57167425..57167443,+|id=chr7:57167425..57167443,+|ontology_enrichment_celltype=CL:0000117!1.33e-11!23;CL:0000337!1.33e-11!23;CL:0002612!2.89e-10!3;CL:0002610!2.89e-09!3;CL:0000540!1.63e-07!33;CL:0000047!1.63e-07!33;CL:0000031!1.63e-07!33;CL:0000404!1.63e-07!33;CL:0002611!1.74e-07!2|ontology_enrichment_celltype_v019_2=CL:0002612,1.31e-22,3;CL:0002611,6.84e-16,2;CL:0000117,2.72e-11,23;CL:0000337,2.72e-11,23;CL:0000540,8.60e-08,33;CL:0000047,8.60e-08,33;CL:0000031,8.60e-08,33;CL:0000404,8.60e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!2.24e-25!12;UBERON:0003057!2.24e-25!12;UBERON:0002240!3.62e-19!6;UBERON:0005174!3.62e-19!6;UBERON:0001137!3.62e-19!6;UBERON:0001948!4.09e-16!5;UBERON:0002315!4.09e-16!5;UBERON:0002257!2.89e-10!3;UBERON:0001017!7.24e-10!73;UBERON:0005743!7.24e-10!73;UBERON:0000073!1.69e-09!75;UBERON:0001016!1.69e-09!75;UBERON:0004684!2.89e-09!3;UBERON:0002275!2.89e-09!3;UBERON:0001049!6.90e-09!52;UBERON:0005068!6.90e-09!52;UBERON:0006241!6.90e-09!52;UBERON:0007135!6.90e-09!52;UBERON:0004733!8.63e-09!6;UBERON:0004732!8.63e-09!6;UBERON:0002028!8.63e-09!6;UBERON:0007277!8.63e-09!6;UBERON:0002298!1.85e-08!6;UBERON:0004121!8.19e-08!102;UBERON:0000924!8.19e-08!102;UBERON:0006601!8.19e-08!102;UBERON:0002346!8.35e-08!71;UBERON:0003075!8.35e-08!71;UBERON:0007284!8.35e-08!71;UBERON:0001896!1.22e-07!2;UBERON:0005290!1.22e-07!2;UBERON:0010096!1.22e-07!2;UBERON:0002256!1.74e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.29e-60,12;UBERON:0003057,1.29e-60,12;UBERON:0002240,2.82e-44,6;UBERON:0005174,2.82e-44,6;UBERON:0001137,2.82e-44,6;UBERON:0001948,7.88e-37,5;UBERON:0002315,7.88e-37,5;UBERON:0002257,1.31e-22,3;UBERON:0004733,5.92e-20,6;UBERON:0004732,5.92e-20,6;UBERON:0002028,5.92e-20,6;UBERON:0007277,5.92e-20,6;UBERON:0001896,2.90e-16,2;UBERON:0002298,2.90e-16,2;UBERON:0005290,2.90e-16,2;UBERON:0010096,2.90e-16,2;UBERON:0002256,6.84e-16,2;UBERON:0001049,1.91e-13,52;UBERON:0005068,1.91e-13,52;UBERON:0006241,1.91e-13,52;UBERON:0007135,1.91e-13,52;UBERON:0002346,4.65e-13,64;UBERON:0003075,4.65e-13,64;UBERON:0007284,4.65e-13,64;UBERON:0000073,8.58e-13,54;UBERON:0000489,1.43e-12,21;UBERON:0001017,2.35e-11,73;UBERON:0010371,2.48e-11,73;UBERON:0001016,5.02e-11,75;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0010314,8.77e-09,92;UBERON:0002037,4.78e-08,4;UBERON:0002680,4.78e-08,4;UBERON:0001895,4.78e-08,4;UBERON:0010092,4.78e-08,4;UBERON:0006215,4.78e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,2.65042249141936,0,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0,0,0,0.837548997004143,0,0,2.35702868378934,1.70846016958924,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.204109497453984,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85321415970701,6.21221938938677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.34413859047294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr7:57167425..57167443,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=353 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:57167425..57167443,+ | |||
|description=CAGE_peak_at_chr7:57167425..57167443,+ | |||
|id=chr7:57167425..57167443,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.33e-11!23;CL:0000337!1.33e-11!23;CL:0002612!2.89e-10!3;CL:0002610!2.89e-09!3;CL:0000540!1.63e-07!33;CL:0000047!1.63e-07!33;CL:0000031!1.63e-07!33;CL:0000404!1.63e-07!33;CL:0002611!1.74e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.31e-22,3;CL:0002611,6.84e-16,2;CL:0000117,2.72e-11,23;CL:0000337,2.72e-11,23;CL:0000540,8.60e-08,33;CL:0000047,8.60e-08,33;CL:0000031,8.60e-08,33;CL:0000404,8.60e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!2.24e-25!12;UBERON:0003057!2.24e-25!12;UBERON:0002240!3.62e-19!6;UBERON:0005174!3.62e-19!6;UBERON:0001137!3.62e-19!6;UBERON:0001948!4.09e-16!5;UBERON:0002315!4.09e-16!5;UBERON:0002257!2.89e-10!3;UBERON:0001017!7.24e-10!73;UBERON:0005743!7.24e-10!73;UBERON:0000073!1.69e-09!75;UBERON:0001016!1.69e-09!75;UBERON:0004684!2.89e-09!3;UBERON:0002275!2.89e-09!3;UBERON:0001049!6.90e-09!52;UBERON:0005068!6.90e-09!52;UBERON:0006241!6.90e-09!52;UBERON:0007135!6.90e-09!52;UBERON:0004733!8.63e-09!6;UBERON:0004732!8.63e-09!6;UBERON:0002028!8.63e-09!6;UBERON:0007277!8.63e-09!6;UBERON:0002298!1.85e-08!6;UBERON:0004121!8.19e-08!102;UBERON:0000924!8.19e-08!102;UBERON:0006601!8.19e-08!102;UBERON:0002346!8.35e-08!71;UBERON:0003075!8.35e-08!71;UBERON:0007284!8.35e-08!71;UBERON:0001896!1.22e-07!2;UBERON:0005290!1.22e-07!2;UBERON:0010096!1.22e-07!2;UBERON:0002256!1.74e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.29e-60,12;UBERON:0003057,1.29e-60,12;UBERON:0002240,2.82e-44,6;UBERON:0005174,2.82e-44,6;UBERON:0001137,2.82e-44,6;UBERON:0001948,7.88e-37,5;UBERON:0002315,7.88e-37,5;UBERON:0002257,1.31e-22,3;UBERON:0004733,5.92e-20,6;UBERON:0004732,5.92e-20,6;UBERON:0002028,5.92e-20,6;UBERON:0007277,5.92e-20,6;UBERON:0001896,2.90e-16,2;UBERON:0002298,2.90e-16,2;UBERON:0005290,2.90e-16,2;UBERON:0010096,2.90e-16,2;UBERON:0002256,6.84e-16,2;UBERON:0001049,1.91e-13,52;UBERON:0005068,1.91e-13,52;UBERON:0006241,1.91e-13,52;UBERON:0007135,1.91e-13,52;UBERON:0002346,4.65e-13,64;UBERON:0003075,4.65e-13,64;UBERON:0007284,4.65e-13,64;UBERON:0000073,8.58e-13,54;UBERON:0000489,1.43e-12,21;UBERON:0001017,2.35e-11,73;UBERON:0010371,2.48e-11,73;UBERON:0001016,5.02e-11,75;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0010314,8.77e-09,92;UBERON:0002037,4.78e-08,4;UBERON:0002680,4.78e-08,4;UBERON:0001895,4.78e-08,4;UBERON:0010092,4.78e-08,4;UBERON:0006215,4.78e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,2.65042249141936,0,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0,0,0,0.837548997004143,0,0,2.35702868378934,1.70846016958924,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.204109497453984,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85321415970701,6.21221938938677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.34413859047294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr7:57167425..57167443,+ | |||
}} |
Latest revision as of 10:40, 5 August 2015
Short description: | p@chr7:57167425..57167443, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:57167425..57167443, + |
Coexpression cluster: | MCL_coexpression_mm9:353 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.31e-22 | 3 |
neuron of the dorsal spinal cord | 6.84e-16 | 2 |
CNS neuron (sensu Vertebrata) | 2.72e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.72e-11 | 23 |
neuron | 8.60e-08 | 33 |
neuronal stem cell | 8.60e-08 | 33 |
neuroblast | 8.60e-08 | 33 |
electrically signaling cell | 8.60e-08 | 33 |