FFCP PHASE1:Mm9::chr1:75543024..75543089,+: Difference between revisions
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{{FFCP|EntrezGene=20536|HGNC=|MCL_coexpression_id=1|UniProt=F8WHM3,D3YWK8|association_with_transcript=0bp_to_ENSMUST00000027415,ENSMUST00000150142_5end|description=CAGE_peak_1_at_Slc4a3_5end|id=chr1:75543024..75543089,+|ontology_enrichment_celltype=CL:0000117!4.90e-07!23;CL:0000337!4.90e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.01e-07,23;CL:0000337,4.01e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.01e-22!73;UBERON:0005743!2.01e-22!73;UBERON:0002346!1.25e-21!71;UBERON:0003075!1.25e-21!71;UBERON:0007284!1.25e-21!71;UBERON:0004121!2.87e-21!102;UBERON:0000924!2.87e-21!102;UBERON:0006601!2.87e-21!102;UBERON:0000073!3.52e-21!75;UBERON:0001016!3.52e-21!75;UBERON:0001049!7.87e-20!52;UBERON:0005068!7.87e-20!52;UBERON:0006241!7.87e-20!52;UBERON:0007135!7.87e-20!52;UBERON:0000955!6.30e-19!50;UBERON:0006238!6.30e-19!50;UBERON:0002616!2.83e-18!49;UBERON:0000033!3.62e-18!63;UBERON:0003080!2.24e-14!40;UBERON:0003056!2.62e-14!49;UBERON:0002780!8.36e-14!39;UBERON:0001890!8.36e-14!39;UBERON:0006240!8.36e-14!39;UBERON:0002020!5.36e-13!34;UBERON:0004111!1.33e-11!122;UBERON:0000025!2.44e-11!114;UBERON:0002791!1.86e-10!29;UBERON:0003528!1.86e-10!29;UBERON:0001893!1.86e-10!29;UBERON:0000468!2.29e-08!333;UBERON:0002021!4.99e-08!10;UBERON:0000411!4.99e-08!10;UBERON:0001950!4.99e-08!10;UBERON:0002619!5.47e-08!17;UBERON:0007811!1.57e-07!86;UBERON:0000153!1.70e-07!94;UBERON:0007100!6.06e-07!18;UBERON:0000948!6.06e-07!18;UBERON:0005498!6.06e-07!18;UBERON:0004140!6.06e-07!18;UBERON:0009881!6.06e-07!18;UBERON:0004141!6.06e-07!18;UBERON:0003084!6.06e-07!18;UBERON:0007005!6.06e-07!18;UBERON:0004139!6.06e-07!18;UBERON:0004291!6.06e-07!18;UBERON:0003103!7.11e-07!43;UBERON:0000956!7.94e-07!21;UBERON:0001869!7.94e-07!21;UBERON:0000203!7.94e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.63e-29,92;UBERON:0001017,9.39e-23,73;UBERON:0000073,2.20e-21,54;UBERON:0001016,2.69e-21,75;UBERON:0001049,4.05e-20,52;UBERON:0005068,4.05e-20,52;UBERON:0006241,4.05e-20,52;UBERON:0007135,4.05e-20,52;UBERON:0002346,7.09e-19,64;UBERON:0003075,7.09e-19,64;UBERON:0007284,7.09e-19,64;UBERON:0004121,3.93e-18,95;UBERON:0000924,3.93e-18,95;UBERON:0006601,3.93e-18,95;UBERON:0000955,2.33e-17,47;UBERON:0006238,2.33e-17,47;UBERON:0002616,1.03e-16,46;UBERON:0010371,3.03e-16,73;UBERON:0003080,1.41e-14,40;UBERON:0003056,1.65e-14,49;UBERON:0002780,5.35e-14,39;UBERON:0001890,5.35e-14,39;UBERON:0006240,5.35e-14,39;UBERON:0002020,3.54e-13,34;UBERON:0004111,2.40e-11,122;UBERON:0000025,4.47e-11,114;UBERON:0003528,1.35e-10,29;UBERON:0002791,1.35e-10,29;UBERON:0001893,1.35e-10,29;UBERON:0002021,3.94e-08,10;UBERON:0000411,3.94e-08,10;UBERON:0001950,3.94e-08,10;UBERON:0002619,4.33e-08,17;UBERON:0007100,4.97e-07,18;UBERON:0000948,4.97e-07,18;UBERON:0005498,4.97e-07,18;UBERON:0004140,4.97e-07,18;UBERON:0009881,4.97e-07,18;UBERON:0004141,4.97e-07,18;UBERON:0003084,4.97e-07,18;UBERON:0007005,4.97e-07,18;UBERON:0004139,4.97e-07,18;UBERON:0004291,4.97e-07,18;UBERON:0000956,6.55e-07,21;UBERON:0001869,6.55e-07,21;UBERON:0000203,6.55e-07,21;UBERON:0003103,7.20e-07,43|phase1_expression=6.08565618998217,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,9.43980520676875,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.7697299954627,3.04130793658544,3.85448179539531,5.47673941043627,3.48840250208714,6.81027166476863,9.13820525649132,3.3596741190087,1.43752564364972,0.167782606057736,0,0,4.3734104126111,7.44986943840768,5.67239301505187,14.3644687210314,10.5798195854407,14.5781222806421,1.69422266034566,2.66788438833342,0.899899717281399,0,0,11.3848041996994,19.9793518767208,1.97010263386108,1.08004750665353,2.10324961351382,28.2794474559766,22.307722636113,4.04219637409348,2.97120960156533,3.67687514644008,24.2254938198655,29.7511497738487,21.8121277223866,13.58428763621,14.1805847583735,11.9810075228055,37.4105218661851,23.6360296213306,29.1844653253707,21.5078867395777,21.9252388430619,10.2519695203915,0.757261933331841,1.51143120213571,10.4351215932604,0,0,0,0,0,2.94933282276679,4.94247935476367,3.11743205523443,6.36011234118612,4.64783285263046,5.13305909657271,7.64415719119937,14.2213340630666,1.08245520505607,0.506719730950197,1.01104889002957,1.1418387971906,1.03575153458869,21.6725523034644,5.55153045651635,9.43842982767638,11.0695438682908,10.2491395575783,14.9337658062345,14.702991185572,1.73036477414062,3.61498392299779,0,2.91180329905337,1.98757366614354,2.90925151881133,1.86391761218122,18.1524094147159,27.4375185925626,0.766371165625774,0.239630249011841,0,0.127070227073065,26.5129431746536,20.5875271268382,6.65968066198181,40.1534179644159,34.5215867395946,27.8435979709811,28.0677385107221,11.7115268427864,3.11017426525233,1.0108910337347,7.99679052368601,3.90361328888111,2.5289231487682,2.88099407688559,4.21973489940002,5.8511389270142,6.14945857367279,4.8724896771059,8.01980449290949,0.646703978798527,2.45837904218165,4.574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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20536 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WHM3,uniprot:D3YWK8 | |||
|association_with_transcript=0bp_to_ENSMUST00000027415,ENSMUST00000150142_5end | |||
|cluster_id=chr1:75543024..75543089,+ | |||
|description=CAGE_peak_1_at_Slc4a3_5end | |||
|id=chr1:75543024..75543089,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.90e-07!23;CL:0000337!4.90e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.01e-07,23;CL:0000337,4.01e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.01e-22!73;UBERON:0005743!2.01e-22!73;UBERON:0002346!1.25e-21!71;UBERON:0003075!1.25e-21!71;UBERON:0007284!1.25e-21!71;UBERON:0004121!2.87e-21!102;UBERON:0000924!2.87e-21!102;UBERON:0006601!2.87e-21!102;UBERON:0000073!3.52e-21!75;UBERON:0001016!3.52e-21!75;UBERON:0001049!7.87e-20!52;UBERON:0005068!7.87e-20!52;UBERON:0006241!7.87e-20!52;UBERON:0007135!7.87e-20!52;UBERON:0000955!6.30e-19!50;UBERON:0006238!6.30e-19!50;UBERON:0002616!2.83e-18!49;UBERON:0000033!3.62e-18!63;UBERON:0003080!2.24e-14!40;UBERON:0003056!2.62e-14!49;UBERON:0002780!8.36e-14!39;UBERON:0001890!8.36e-14!39;UBERON:0006240!8.36e-14!39;UBERON:0002020!5.36e-13!34;UBERON:0004111!1.33e-11!122;UBERON:0000025!2.44e-11!114;UBERON:0002791!1.86e-10!29;UBERON:0003528!1.86e-10!29;UBERON:0001893!1.86e-10!29;UBERON:0000468!2.29e-08!333;UBERON:0002021!4.99e-08!10;UBERON:0000411!4.99e-08!10;UBERON:0001950!4.99e-08!10;UBERON:0002619!5.47e-08!17;UBERON:0007811!1.57e-07!86;UBERON:0000153!1.70e-07!94;UBERON:0007100!6.06e-07!18;UBERON:0000948!6.06e-07!18;UBERON:0005498!6.06e-07!18;UBERON:0004140!6.06e-07!18;UBERON:0009881!6.06e-07!18;UBERON:0004141!6.06e-07!18;UBERON:0003084!6.06e-07!18;UBERON:0007005!6.06e-07!18;UBERON:0004139!6.06e-07!18;UBERON:0004291!6.06e-07!18;UBERON:0003103!7.11e-07!43;UBERON:0000956!7.94e-07!21;UBERON:0001869!7.94e-07!21;UBERON:0000203!7.94e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.63e-29,92;UBERON:0001017,9.39e-23,73;UBERON:0000073,2.20e-21,54;UBERON:0001016,2.69e-21,75;UBERON:0001049,4.05e-20,52;UBERON:0005068,4.05e-20,52;UBERON:0006241,4.05e-20,52;UBERON:0007135,4.05e-20,52;UBERON:0002346,7.09e-19,64;UBERON:0003075,7.09e-19,64;UBERON:0007284,7.09e-19,64;UBERON:0004121,3.93e-18,95;UBERON:0000924,3.93e-18,95;UBERON:0006601,3.93e-18,95;UBERON:0000955,2.33e-17,47;UBERON:0006238,2.33e-17,47;UBERON:0002616,1.03e-16,46;UBERON:0010371,3.03e-16,73;UBERON:0003080,1.41e-14,40;UBERON:0003056,1.65e-14,49;UBERON:0002780,5.35e-14,39;UBERON:0001890,5.35e-14,39;UBERON:0006240,5.35e-14,39;UBERON:0002020,3.54e-13,34;UBERON:0004111,2.40e-11,122;UBERON:0000025,4.47e-11,114;UBERON:0003528,1.35e-10,29;UBERON:0002791,1.35e-10,29;UBERON:0001893,1.35e-10,29;UBERON:0002021,3.94e-08,10;UBERON:0000411,3.94e-08,10;UBERON:0001950,3.94e-08,10;UBERON:0002619,4.33e-08,17;UBERON:0007100,4.97e-07,18;UBERON:0000948,4.97e-07,18;UBERON:0005498,4.97e-07,18;UBERON:0004140,4.97e-07,18;UBERON:0009881,4.97e-07,18;UBERON:0004141,4.97e-07,18;UBERON:0003084,4.97e-07,18;UBERON:0007005,4.97e-07,18;UBERON:0004139,4.97e-07,18;UBERON:0004291,4.97e-07,18;UBERON:0000956,6.55e-07,21;UBERON:0001869,6.55e-07,21;UBERON:0000203,6.55e-07,21;UBERON:0003103,7.20e-07,43 | |||
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| |||
|short_description=p1@Slc4a3 | |||
}} |
Revision as of 01:10, 6 August 2015
Short description: | p1@Slc4a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc4a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000027415, ENSMUST00000150142_5end |
EntrezGene: | 20536 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.01e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.01e-07 | 23 |