FFCP PHASE1:Mm9::chrX:7499540..7499554,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=980|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:7499540..7499554,+|id=chrX:7499540..7499554,+|ontology_enrichment_celltype=CL:0000117!4.82e-11!23;CL:0000337!4.82e-11!23;CL:0000540!1.51e-07!33;CL:0000047!1.51e-07!33;CL:0000031!1.51e-07!33;CL:0000404!1.51e-07!33;CL:0002319!2.75e-07!43;CL:0000221!5.96e-07!44;CL:0000133!5.96e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.36e-12,23;CL:0000337,2.36e-12,23;CL:0002614,1.96e-09,3;CL:0002610,5.03e-09,3;CL:0002612,2.04e-08,3;CL:0002319,2.92e-08,43;CL:0000221,5.18e-08,44;CL:0000133,5.18e-08,44;CL:0000540,6.08e-08,33;CL:0000047,6.08e-08,33;CL:0000031,6.08e-08,33;CL:0000404,6.08e-08,33;CL:0000878,4.55e-07,2;CL:0000129,4.55e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.02e-28!71;UBERON:0003075!1.02e-28!71;UBERON:0007284!1.02e-28!71;UBERON:0004121!1.31e-24!102;UBERON:0000924!1.31e-24!102;UBERON:0006601!1.31e-24!102;UBERON:0001049!1.73e-24!52;UBERON:0005068!1.73e-24!52;UBERON:0006241!1.73e-24!52;UBERON:0007135!1.73e-24!52;UBERON:0001017!6.36e-24!73;UBERON:0005743!6.36e-24!73;UBERON:0000073!1.24e-23!75;UBERON:0001016!1.24e-23!75;UBERON:0000955!1.41e-22!50;UBERON:0006238!1.41e-22!50;UBERON:0002616!6.66e-22!49;UBERON:0000033!2.66e-20!63;UBERON:0003056!2.27e-17!49;UBERON:0003080!3.66e-17!40;UBERON:0002780!2.75e-16!39;UBERON:0001890!2.75e-16!39;UBERON:0006240!2.75e-16!39;UBERON:0002020!3.41e-15!34;UBERON:0002791!3.65e-11!29;UBERON:0003528!3.65e-11!29;UBERON:0001893!3.65e-11!29;UBERON:0007811!1.02e-10!86;UBERON:0000153!1.30e-08!94;UBERON:0003076!5.37e-08!12;UBERON:0003057!5.37e-08!12;UBERON:0002420!9.89e-08!8;UBERON:0007245!9.89e-08!8;UBERON:0010009!9.89e-08!8;UBERON:0010011!9.89e-08!8;UBERON:0000454!9.89e-08!8;UBERON:0002298!4.83e-07!6;UBERON:0002240!8.38e-07!6;UBERON:0005174!8.38e-07!6;UBERON:0001137!8.38e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.62e-26,54;UBERON:0001017,1.09e-23,73;UBERON:0001016,6.67e-23,75;UBERON:0001049,2.21e-22,52;UBERON:0005068,2.21e-22,52;UBERON:0006241,2.21e-22,52;UBERON:0007135,2.21e-22,52;UBERON:0003076,2.87e-20,12;UBERON:0003057,2.87e-20,12;UBERON:0002346,3.11e-17,64;UBERON:0003075,3.11e-17,64;UBERON:0007284,3.11e-17,64;UBERON:0004121,7.62e-17,95;UBERON:0000924,7.62e-17,95;UBERON:0006601,7.62e-17,95;UBERON:0002240,1.89e-15,6;UBERON:0005174,1.89e-15,6;UBERON:0001137,1.89e-15,6;UBERON:0010371,1.74e-14,73;UBERON:0002616,3.49e-13,46;UBERON:0001948,5.64e-13,5;UBERON:0002315,5.64e-13,5;UBERON:0000955,8.02e-13,47;UBERON:0006238,8.02e-13,47;UBERON:0002950,7.50e-12,4;UBERON:0001891,7.50e-12,4;UBERON:0009616,7.50e-12,4;UBERON:0010286,7.50e-12,4;UBERON:0010314,1.45e-11,92;UBERON:0002038,1.96e-09,3;UBERON:0009663,1.96e-09,3;UBERON:0009661,1.96e-09,3;UBERON:0000125,1.96e-09,3;UBERON:0002308,1.96e-09,3;UBERON:0004684,5.03e-09,3;UBERON:0002275,5.03e-09,3;UBERON:0002020,5.69e-09,34;UBERON:0003080,9.86e-09,40;UBERON:0002257,2.04e-08,3;UBERON:0002780,1.48e-07,39;UBERON:0001890,1.48e-07,39;UBERON:0006240,1.48e-07,39;UBERON:0000025,1.78e-07,114;UBERON:0004733,3.33e-07,6;UBERON:0004732,3.33e-07,6;UBERON:0002028,3.33e-07,6;UBERON:0007277,3.33e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,2.99600110518405,7.68436610643109,0.103689612308478,0.270011876663381,0,1.71390590642282,1.10434270475807,0.244981598429908,0.0958454710182364,0,7.70811166995721,1.40456071893706,1.53606533256243,0.527545150920775,0.640413505216868,0.52091337055676,2.79182999001381,1.68828783009504,2.75036845998258,1.17851434189467,1.85083185038834,1.1183966749518,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.890652834388949,1.04091196059682,0.608930956624282,0.922461989024234,0.452167921657868,0.823120949949934,0.125666591329675,0,0.144599356919912,0,0,0,0,0,1.17112318804619,16.9651832518899,0,0,0,0,1.64769703345305,2.28750301409313,0.753926112677186,0.695297280769106,2.04572365864264,1.66230435647648,1.46017136760982,0.101839363850316,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.411618449517138,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.17211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0.876767573733936,0,0.642642632843614,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0.727067458955011,0.712994756769443,0,0,0,1.02131881726136,0.36012218806262,0.129358683782755,0,0.177340233642274,0.713475270408282,1.15184314421485,5.78483403317739,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0.582961673259701,1.66882771809459,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,1.46803082195995,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0.62799699626633,0.335769232728157,0.19318959403219,0,0,0.428736758158132,0,0,0.920650473014354,0,0.859265911718438,1.37016503954128,0.755393897389701,0,0.900642406448441,1.35942722695261,0.51776031175182,0,1.59609949360412,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0,0,0,0,0,0,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0.154936841185966,0.385813221962283,0.749431733813838,0,1.07435527024149,0.382576664137687,0,0.463735671240843|short_description=p@chrX:7499540..7499554,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=980 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:7499540..7499554,+ | |||
|description=CAGE_peak_at_chrX:7499540..7499554,+ | |||
|id=chrX:7499540..7499554,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.82e-11!23;CL:0000337!4.82e-11!23;CL:0000540!1.51e-07!33;CL:0000047!1.51e-07!33;CL:0000031!1.51e-07!33;CL:0000404!1.51e-07!33;CL:0002319!2.75e-07!43;CL:0000221!5.96e-07!44;CL:0000133!5.96e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.36e-12,23;CL:0000337,2.36e-12,23;CL:0002614,1.96e-09,3;CL:0002610,5.03e-09,3;CL:0002612,2.04e-08,3;CL:0002319,2.92e-08,43;CL:0000221,5.18e-08,44;CL:0000133,5.18e-08,44;CL:0000540,6.08e-08,33;CL:0000047,6.08e-08,33;CL:0000031,6.08e-08,33;CL:0000404,6.08e-08,33;CL:0000878,4.55e-07,2;CL:0000129,4.55e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.02e-28!71;UBERON:0003075!1.02e-28!71;UBERON:0007284!1.02e-28!71;UBERON:0004121!1.31e-24!102;UBERON:0000924!1.31e-24!102;UBERON:0006601!1.31e-24!102;UBERON:0001049!1.73e-24!52;UBERON:0005068!1.73e-24!52;UBERON:0006241!1.73e-24!52;UBERON:0007135!1.73e-24!52;UBERON:0001017!6.36e-24!73;UBERON:0005743!6.36e-24!73;UBERON:0000073!1.24e-23!75;UBERON:0001016!1.24e-23!75;UBERON:0000955!1.41e-22!50;UBERON:0006238!1.41e-22!50;UBERON:0002616!6.66e-22!49;UBERON:0000033!2.66e-20!63;UBERON:0003056!2.27e-17!49;UBERON:0003080!3.66e-17!40;UBERON:0002780!2.75e-16!39;UBERON:0001890!2.75e-16!39;UBERON:0006240!2.75e-16!39;UBERON:0002020!3.41e-15!34;UBERON:0002791!3.65e-11!29;UBERON:0003528!3.65e-11!29;UBERON:0001893!3.65e-11!29;UBERON:0007811!1.02e-10!86;UBERON:0000153!1.30e-08!94;UBERON:0003076!5.37e-08!12;UBERON:0003057!5.37e-08!12;UBERON:0002420!9.89e-08!8;UBERON:0007245!9.89e-08!8;UBERON:0010009!9.89e-08!8;UBERON:0010011!9.89e-08!8;UBERON:0000454!9.89e-08!8;UBERON:0002298!4.83e-07!6;UBERON:0002240!8.38e-07!6;UBERON:0005174!8.38e-07!6;UBERON:0001137!8.38e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.62e-26,54;UBERON:0001017,1.09e-23,73;UBERON:0001016,6.67e-23,75;UBERON:0001049,2.21e-22,52;UBERON:0005068,2.21e-22,52;UBERON:0006241,2.21e-22,52;UBERON:0007135,2.21e-22,52;UBERON:0003076,2.87e-20,12;UBERON:0003057,2.87e-20,12;UBERON:0002346,3.11e-17,64;UBERON:0003075,3.11e-17,64;UBERON:0007284,3.11e-17,64;UBERON:0004121,7.62e-17,95;UBERON:0000924,7.62e-17,95;UBERON:0006601,7.62e-17,95;UBERON:0002240,1.89e-15,6;UBERON:0005174,1.89e-15,6;UBERON:0001137,1.89e-15,6;UBERON:0010371,1.74e-14,73;UBERON:0002616,3.49e-13,46;UBERON:0001948,5.64e-13,5;UBERON:0002315,5.64e-13,5;UBERON:0000955,8.02e-13,47;UBERON:0006238,8.02e-13,47;UBERON:0002950,7.50e-12,4;UBERON:0001891,7.50e-12,4;UBERON:0009616,7.50e-12,4;UBERON:0010286,7.50e-12,4;UBERON:0010314,1.45e-11,92;UBERON:0002038,1.96e-09,3;UBERON:0009663,1.96e-09,3;UBERON:0009661,1.96e-09,3;UBERON:0000125,1.96e-09,3;UBERON:0002308,1.96e-09,3;UBERON:0004684,5.03e-09,3;UBERON:0002275,5.03e-09,3;UBERON:0002020,5.69e-09,34;UBERON:0003080,9.86e-09,40;UBERON:0002257,2.04e-08,3;UBERON:0002780,1.48e-07,39;UBERON:0001890,1.48e-07,39;UBERON:0006240,1.48e-07,39;UBERON:0000025,1.78e-07,114;UBERON:0004733,3.33e-07,6;UBERON:0004732,3.33e-07,6;UBERON:0002028,3.33e-07,6;UBERON:0007277,3.33e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,2.99600110518405,7.68436610643109,0.103689612308478,0.270011876663381,0,1.71390590642282,1.10434270475807,0.244981598429908,0.0958454710182364,0,7.70811166995721,1.40456071893706,1.53606533256243,0.527545150920775,0.640413505216868,0.52091337055676,2.79182999001381,1.68828783009504,2.75036845998258,1.17851434189467,1.85083185038834,1.1183966749518,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.890652834388949,1.04091196059682,0.608930956624282,0.922461989024234,0.452167921657868,0.823120949949934,0.125666591329675,0,0.144599356919912,0,0,0,0,0,1.17112318804619,16.9651832518899,0,0,0,0,1.64769703345305,2.28750301409313,0.753926112677186,0.695297280769106,2.04572365864264,1.66230435647648,1.46017136760982,0.101839363850316,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.411618449517138,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.17211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0.876767573733936,0,0.642642632843614,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0.727067458955011,0.712994756769443,0,0,0,1.02131881726136,0.36012218806262,0.129358683782755,0,0.177340233642274,0.713475270408282,1.15184314421485,5.78483403317739,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0.582961673259701,1.66882771809459,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,1.46803082195995,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0.62799699626633,0.335769232728157,0.19318959403219,0,0,0.428736758158132,0,0,0.920650473014354,0,0.859265911718438,1.37016503954128,0.755393897389701,0,0.900642406448441,1.35942722695261,0.51776031175182,0,1.59609949360412,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0,0,0,0,0,0,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0.154936841185966,0.385813221962283,0.749431733813838,0,1.07435527024149,0.382576664137687,0,0.463735671240843 | |||
|short_description=p@chrX:7499540..7499554,+ | |||
}} |
Latest revision as of 10:45, 6 August 2015
Short description: | p@chrX:7499540..7499554, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:7499540..7499554, + |
Coexpression cluster: | MCL_coexpression_mm9:980 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.36e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.36e-12 | 23 |
neuron of the substantia nigra | 1.96e-09 | 3 |
raphe nuclei neuron | 5.03e-09 | 3 |
neuron of the ventral spinal cord | 2.04e-08 | 3 |
neural cell | 2.92e-08 | 43 |
ectodermal cell | 5.18e-08 | 44 |
neurectodermal cell | 5.18e-08 | 44 |
neuron | 6.08e-08 | 33 |
neuronal stem cell | 6.08e-08 | 33 |
neuroblast | 6.08e-08 | 33 |
electrically signaling cell | 6.08e-08 | 33 |
central nervous system macrophage | 4.55e-07 | 2 |
microglial cell | 4.55e-07 | 2 |