FFCP PHASE1:Hg19::chr15:89943388..89943424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:89943388..89943424,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr15:89943388..89943424,+ | |description=CAGE_peak_at_chr15:89943388..89943424,+ | ||
|id=chr15:89943388..89943424,+ | |id=chr15:89943388..89943424,+ | ||
|ontology_enrichment_celltype=CL:0002319!6.91e-09!25 | |ontology_enrichment_celltype=CL:0002319!6.91e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.78e-16;3!CL:0002319;9.97e-14;25!CL:0000047;4.75e-11;2!CL:0000333;2.08e-09;5!CL:0000540;2.89e-08;6!CL:0000404;2.89e-08;6!CL:0000128;2.64e-07;7!CL:0000126;2.64e-07;7!CL:0000127;2.64e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.69e-16,3;CL:0000047,8.74e-16,8;CL:0002319,9.60e-14,25;CL:0000133,1.91e-09,59;CL:0000540,3.03e-08,6;CL:0000031,3.03e-08,6;CL:0000404,3.03e-08,6;CL:0000221,2.27e-07,72;CL:0000128,2.59e-07,7;CL:0000126,2.59e-07,7;CL:0000127,2.59e-07,7;CL:0002453,2.59e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;2.89e-08;6 | |||
|ontology_enrichment_disease=DOID:5409!7.82e-07!4 | |ontology_enrichment_disease=DOID:5409!7.82e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:171;4.55e-08;10!DOID:169;6.51e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.51e-08,10;DOID:169,5.99e-08,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002021;9.77e-16;5!UBERON:0003528;1.64e-15;34!UBERON:0002020;1.64e-15;34!UBERON:0002791;2.58e-15;32!UBERON:0001869;1.03e-14;32!UBERON:0000956;2.81e-14;25!UBERON:0000203;2.81e-14;25!UBERON:0001893;1.02e-13;34!UBERON:0003714;2.46e-11;2!UBERON:0000013;2.08e-09;5!UBERON:0002410;2.08e-09;5!UBERON:0002780;4.55e-09;41!UBERON:0001890;4.55e-09;41!UBERON:0000010;5.13e-09;8!UBERON:0001016;7.36e-09;83!UBERON:0001017;1.35e-08;75!UBERON:0000073;4.13e-08;53!UBERON:0002616;4.13e-08;53!UBERON:0001950;5.12e-08;20!UBERON:0000955;7.00e-08;68!UBERON:0005383;2.58e-07;3!UBERON:0005382;2.58e-07;3!UBERON:0002619;2.88e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.05e-25,89;UBERON:0001017,2.08e-19,81;UBERON:0003528,5.19e-18,34;UBERON:0002020,5.19e-18,34;UBERON:0002791,3.54e-16,32;UBERON:0001869,3.54e-16,32;UBERON:0002021,1.23e-15,5;UBERON:0001893,3.97e-15,34;UBERON:0000956,3.05e-14,25;UBERON:0000203,3.05e-14,25;UBERON:0001049,5.03e-14,56;UBERON:0005068,5.03e-14,56;UBERON:0006241,5.03e-14,56;UBERON:0007135,5.03e-14,56;UBERON:0004121,1.83e-13,171;UBERON:0000924,1.83e-13,171;UBERON:0006601,1.83e-13,171;UBERON:0000073,8.60e-13,53;UBERON:0002616,8.60e-13,53;UBERON:0002780,3.04e-12,41;UBERON:0001890,3.04e-12,41;UBERON:0003080,3.04e-12,41;UBERON:0006240,3.04e-12,41;UBERON:0003714,2.73e-11,2;UBERON:0002346,4.78e-11,86;UBERON:0011216,5.70e-11,223;UBERON:0000955,7.61e-11,68;UBERON:0006238,7.61e-11,68;UBERON:0003075,3.56e-10,82;UBERON:0007284,3.56e-10,82;UBERON:0000013,1.88e-09,5;UBERON:0002410,1.88e-09,5;UBERON:0003056,3.58e-09,61;UBERON:0000010,5.02e-09,8;UBERON:0010371,1.56e-08,104;UBERON:0001950,5.54e-08,20;UBERON:0005383,2.85e-07,3;UBERON:0005382,2.85e-07,3;UBERON:0002619,3.10e-07,22 | |||
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|short_description=p@chr15:89943388..89943424,+ | |short_description=p@chr15:89943388..89943424,+ | ||
}} | }} |
Latest revision as of 05:19, 25 July 2015
Short description: | p@chr15:89943388..89943424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:89943388..89943424, + |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.69e-16 | 3 |
neuronal stem cell | 8.74e-16 | 8 |
neural cell | 9.60e-14 | 25 |
neurectodermal cell | 1.91e-09 | 59 |
neuron | 3.03e-08 | 6 |
neuroblast | 3.03e-08 | 6 |
electrically signaling cell | 3.03e-08 | 6 |
ectodermal cell | 2.27e-07 | 72 |
oligodendrocyte | 2.59e-07 | 7 |
macroglial cell | 2.59e-07 | 7 |
astrocyte | 2.59e-07 | 7 |
oligodendrocyte precursor cell | 2.59e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.51e-08 | 10 |
neuroendocrine tumor | 5.99e-08 | 6 |