FFCP PHASE1:Hg19::chr16:30032610..30032629,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:30032610..30032629,- | |||
|description=CAGE_peak_at_chr16:30032610..30032629,- | |description=CAGE_peak_at_chr16:30032610..30032629,- | ||
|id=chr16:30032610..30032629,- | |id=chr16:30032610..30032629,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.63e-07;7!CL:0000586;3.63e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.28e-07,7;CL:0000586,3.28e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.45e-07;82 | |||
|ontology_enrichment_disease=DOID:0050687!2.74e-21!143;DOID:162!4.06e-19!235;DOID:14566!1.01e-18!239;DOID:305!5.34e-18!106;DOID:3095!1.22e-08!22;DOID:2994!1.22e-08!22 | |ontology_enrichment_disease=DOID:0050687!2.74e-21!143;DOID:162!4.06e-19!235;DOID:14566!1.01e-18!239;DOID:305!5.34e-18!106;DOID:3095!1.22e-08!22;DOID:2994!1.22e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.30e-08;22!DOID:2994;4.30e-08;22!DOID:3119;1.71e-07;14!DOID:0050687;7.80e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.82e-23,143;DOID:162,3.44e-21,235;DOID:14566,9.64e-21,239;DOID:305,2.26e-19,106;DOID:0050686,5.99e-10,137;DOID:3095,3.25e-08,22;DOID:2994,3.25e-08,22;DOID:3119,1.44e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.48e-21!94;UBERON:0001016!5.48e-21!94;UBERON:0001049!1.83e-20!57;UBERON:0005068!1.83e-20!57;UBERON:0006241!1.83e-20!57;UBERON:0007135!1.83e-20!57;UBERON:0005743!1.05e-17!86;UBERON:0001017!1.12e-17!82;UBERON:0002346!1.75e-17!90;UBERON:0000955!4.27e-16!69;UBERON:0006238!4.27e-16!69;UBERON:0002616!4.51e-16!59;UBERON:0003075!7.00e-16!86;UBERON:0007284!7.00e-16!86;UBERON:0003080!1.62e-15!42;UBERON:0002780!3.87e-15!41;UBERON:0001890!3.87e-15!41;UBERON:0006240!3.87e-15!41;UBERON:0007023!1.76e-14!115;UBERON:0002020!1.63e-12!34;UBERON:0003528!1.63e-12!34;UBERON:0003056!2.50e-12!61;UBERON:0000924!3.96e-12!173;UBERON:0006601!3.96e-12!173;UBERON:0001893!6.32e-12!34;UBERON:0002791!9.09e-12!33;UBERON:0001869!5.46e-11!32;UBERON:0004121!6.03e-11!169;UBERON:0002619!2.36e-08!22;UBERON:0000956!3.00e-08!25;UBERON:0000203!3.00e-08!25;UBERON:0000033!7.57e-08!123;UBERON:0000153!1.37e-07!129;UBERON:0007811!1.37e-07!129;UBERON:0001950!2.67e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.75e-11;53!UBERON:0002616;2.75e-11;53!UBERON:0002780;1.87e-10;41!UBERON:0001890;1.87e-10;41!UBERON:0003528;6.03e-10;34!UBERON:0002020;6.03e-10;34!UBERON:0002791;6.39e-09;32!UBERON:0001893;2.10e-08;34!UBERON:0001869;5.59e-08;32!UBERON:0002619;8.91e-08;22!UBERON:0001016;9.81e-08;83!UBERON:0000125;1.08e-07;9!UBERON:0002308;1.08e-07;9!UBERON:0002298;3.75e-07;6!UBERON:0001017;4.34e-07;75!UBERON:0000955;6.00e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.13e-19,56;UBERON:0005068,1.13e-19,56;UBERON:0006241,1.13e-19,56;UBERON:0007135,1.13e-19,56;UBERON:0001016,4.67e-19,89;UBERON:0000073,1.93e-17,53;UBERON:0002616,1.93e-17,53;UBERON:0001017,2.21e-16,81;UBERON:0000955,9.61e-15,68;UBERON:0006238,9.61e-15,68;UBERON:0002780,1.72e-13,41;UBERON:0001890,1.72e-13,41;UBERON:0003080,1.72e-13,41;UBERON:0006240,1.72e-13,41;UBERON:0002346,2.02e-13,86;UBERON:0003075,4.85e-12,82;UBERON:0007284,4.85e-12,82;UBERON:0011216,7.10e-12,223;UBERON:0003528,3.44e-11,34;UBERON:0002020,3.44e-11,34;UBERON:0010371,7.82e-11,104;UBERON:0007023,6.19e-10,114;UBERON:0001893,1.01e-09,34;UBERON:0002791,1.38e-09,32;UBERON:0003056,1.10e-08,61;UBERON:0004121,1.10e-08,171;UBERON:0000924,1.10e-08,171;UBERON:0006601,1.10e-08,171;UBERON:0001869,1.82e-08,32;UBERON:0003076,1.44e-07,15;UBERON:0003057,1.44e-07,15;UBERON:0002619,1.48e-07,22;UBERON:0000125,2.05e-07,9;UBERON:0002308,2.05e-07,9;UBERON:0002298,3.42e-07,6 | |||
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| ||
|short_description=p@chr16:30032610..30032629,- | |short_description=p@chr16:30032610..30032629,- | ||
}} | }} |
Latest revision as of 08:01, 25 July 2015
Short description: | p@chr16:30032610..30032629, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:30032610..30032629, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.28e-07 | 7 |
germ cell | 3.28e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.13e-19 | 56 |
neural rod | 1.13e-19 | 56 |
future spinal cord | 1.13e-19 | 56 |
neural keel | 1.13e-19 | 56 |
nervous system | 4.67e-19 | 89 |
regional part of nervous system | 1.93e-17 | 53 |
regional part of brain | 1.93e-17 | 53 |
central nervous system | 2.21e-16 | 81 |
brain | 9.61e-15 | 68 |
future brain | 9.61e-15 | 68 |
regional part of forebrain | 1.72e-13 | 41 |
forebrain | 1.72e-13 | 41 |
anterior neural tube | 1.72e-13 | 41 |
future forebrain | 1.72e-13 | 41 |
neurectoderm | 2.02e-13 | 86 |
neural plate | 4.85e-12 | 82 |
presumptive neural plate | 4.85e-12 | 82 |
organ system subdivision | 7.10e-12 | 223 |
brain grey matter | 3.44e-11 | 34 |
gray matter | 3.44e-11 | 34 |
ecto-epithelium | 7.82e-11 | 104 |
adult organism | 6.19e-10 | 114 |
telencephalon | 1.01e-09 | 34 |
regional part of telencephalon | 1.38e-09 | 32 |
pre-chordal neural plate | 1.10e-08 | 61 |
ectoderm-derived structure | 1.10e-08 | 171 |
ectoderm | 1.10e-08 | 171 |
presumptive ectoderm | 1.10e-08 | 171 |
cerebral hemisphere | 1.82e-08 | 32 |
posterior neural tube | 1.44e-07 | 15 |
chordal neural plate | 1.44e-07 | 15 |
regional part of cerebral cortex | 1.48e-07 | 22 |
neural nucleus | 2.05e-07 | 9 |
nucleus of brain | 2.05e-07 | 9 |
brainstem | 3.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.82e-23 | 143 |
cancer | 3.44e-21 | 235 |
disease of cellular proliferation | 9.64e-21 | 239 |
carcinoma | 2.26e-19 | 106 |
organ system cancer | 5.99e-10 | 137 |
germ cell and embryonal cancer | 3.25e-08 | 22 |
germ cell cancer | 3.25e-08 | 22 |
gastrointestinal system cancer | 1.44e-07 | 14 |