FFCP PHASE1:Mm9::chr14:54838649..54838660,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1356|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:54838649..54838660,+|id=chr14:54838649..54838660,+|ontology_enrichment_celltype=CL:0000791!2.57e-45!9;CL:0000789!2.57e-45!9;CL:0002420!2.57e-45!9;CL:0002419!2.57e-45!9;CL:0000790!2.57e-45!9;CL:0000624!3.38e-40!8;CL:0000084!6.87e-37!11;CL:0000827!6.87e-37!11;CL:0000838!1.00e-33!12;CL:0000542!4.76e-31!13;CL:0000051!4.76e-31!13;CL:0000893!1.40e-30!6;CL:0002489!1.40e-30!6;CL:0000898!1.40e-30!6;CL:0000809!1.40e-30!6;CL:0000810!1.40e-30!6;CL:0000895!1.40e-30!6;CL:0000808!1.40e-30!6;CL:0000894!1.40e-30!6;CL:0000806!1.40e-30!6;CL:0000807!1.40e-30!6;CL:0000805!1.40e-30!6;CL:0002425!1.40e-30!6;CL:0002436!1.40e-30!6;CL:0002427!1.40e-30!6;CL:0002428!1.40e-30!6;CL:0002429!1.40e-30!6;CL:0002433!1.40e-30!6;CL:0002431!1.40e-30!6;CL:0002432!1.40e-30!6;CL:0000738!1.76e-23!17;CL:0002087!1.76e-23!17;CL:0002031!3.39e-19!25;CL:0000988!1.09e-14!32;CL:0002032!1.09e-14!32;CL:0000037!1.09e-14!32;CL:0000566!1.09e-14!32;CL:0000837!1.09e-14!32;CL:0002320!8.85e-10!46;CL:0000134!8.85e-10!46;CL:0000219!4.12e-08!54|ontology_enrichment_celltype_v019_2=CL:0000791,2.82e-78,9;CL:0000789,2.82e-78,9;CL:0002420,2.82e-78,9;CL:0002419,2.82e-78,9;CL:0000790,2.82e-78,9;CL:0000624,2.84e-69,8;CL:0000084,4.91e-64,11;CL:0000827,4.91e-64,11;CL:0000838,1.08e-58,12;CL:0000542,3.60e-54,13;CL:0000051,3.60e-54,13;CL:0000893,2.30e-52,6;CL:0002489,2.30e-52,6;CL:0000898,2.30e-52,6;CL:0000809,2.30e-52,6;CL:0000810,2.30e-52,6;CL:0000895,2.30e-52,6;CL:0000808,2.30e-52,6;CL:0000894,2.30e-52,6;CL:0000806,2.30e-52,6;CL:0000807,2.30e-52,6;CL:0000805,2.30e-52,6;CL:0002425,2.30e-52,6;CL:0002436,2.30e-52,6;CL:0002427,2.30e-52,6;CL:0002428,2.30e-52,6;CL:0002429,2.30e-52,6;CL:0002433,2.30e-52,6;CL:0002431,2.30e-52,6;CL:0002432,2.30e-52,6;CL:0000738,2.16e-41,17;CL:0002087,2.16e-41,17;CL:0002031,4.47e-28,25;CL:0000988,7.18e-22,32;CL:0002032,7.18e-22,32;CL:0000037,7.18e-22,32;CL:0000837,7.18e-22,32;CL:0002320,4.23e-15,46;CL:0000134,4.23e-15,46;CL:0000219,8.48e-13,54;CL:0000625,1.63e-10,1;CL:0000815,1.03e-09,1;CL:0000792,1.03e-09,1;CL:0000723,2.26e-07,91;CL:0000048,2.26e-07,91;CL:0000034,7.08e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.36e-29!23;UBERON:0000974!4.36e-29!23;UBERON:0004807!4.36e-29!23;UBERON:0005058!4.36e-29!23;UBERON:0003351!4.36e-29!23;UBERON:0009113!4.36e-29!23;UBERON:0003295!4.36e-29!23;UBERON:0009722!4.36e-29!23;UBERON:0005562!4.36e-29!23;UBERON:0007690!4.36e-29!23;UBERON:0006562!8.31e-28!24;UBERON:0003408!8.31e-28!24;UBERON:0001557!8.31e-28!24;UBERON:0001042!8.31e-28!24;UBERON:0008814!8.31e-28!24;UBERON:0009145!8.31e-28!24;UBERON:0000072!1.56e-24!27;UBERON:0004177!1.00e-22!29;UBERON:0000063!1.54e-18!35;UBERON:0002193!4.07e-18!48;UBERON:0002390!1.31e-16!45;UBERON:0003061!1.31e-16!45;UBERON:0000065!1.42e-15!41;UBERON:0001004!3.68e-15!42;UBERON:0005057!3.58e-12!51;UBERON:0002405!8.94e-12!70;UBERON:0003929!3.71e-11!55;UBERON:0002368!4.46e-10!60;UBERON:0002384!8.85e-10!46;UBERON:0002530!3.67e-09!65;UBERON:0000490!5.38e-09!66;UBERON:0003081!6.26e-09!88;UBERON:0005911!1.59e-08!69;UBERON:0000949!4.30e-08!72;UBERON:0000153!6.21e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.23e-15,46;UBERON:0002370,1.07e-13,23;UBERON:0000974,1.07e-13,23;UBERON:0004807,1.07e-13,23;UBERON:0005058,1.07e-13,23;UBERON:0003351,1.07e-13,23;UBERON:0009113,1.07e-13,23;UBERON:0003295,1.07e-13,23;UBERON:0009722,1.07e-13,23;UBERON:0005562,1.07e-13,23;UBERON:0007690,1.07e-13,23;UBERON:0006562,4.00e-13,24;UBERON:0003408,4.00e-13,24;UBERON:0001557,4.00e-13,24;UBERON:0001042,4.00e-13,24;UBERON:0008814,4.00e-13,24;UBERON:0009145,4.00e-13,24;UBERON:0000072,1.18e-11,27;UBERON:0004177,7.61e-11,29;UBERON:0005057,7.61e-11,29;UBERON:0000029,8.42e-10,1;UBERON:0001097,8.42e-10,1;UBERON:0003968,8.42e-10,1;UBERON:0001467,8.42e-10,1;UBERON:0000077,5.81e-09,35;UBERON:0007811,1.04e-08,36;UBERON:0002193,1.11e-08,48;UBERON:0002405,1.11e-08,48;UBERON:0000065,1.26e-07,41;UBERON:0001004,1.94e-07,42;UBERON:0000153,2.92e-07,43;UBERON:0002390,6.27e-07,45;UBERON:0003061,6.27e-07,45|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,6.05391505252167,3.97909694747389,2.22583358693156,3.66951931378547,4.10881751834894,4.72070173062586,0,0,0,0,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07753499407941,9.41062637598899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:54838649..54838660,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1356 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:54838649..54838660,+ | |||
|description=CAGE_peak_at_chr14:54838649..54838660,+ | |||
|id=chr14:54838649..54838660,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.57e-45!9;CL:0000789!2.57e-45!9;CL:0002420!2.57e-45!9;CL:0002419!2.57e-45!9;CL:0000790!2.57e-45!9;CL:0000624!3.38e-40!8;CL:0000084!6.87e-37!11;CL:0000827!6.87e-37!11;CL:0000838!1.00e-33!12;CL:0000542!4.76e-31!13;CL:0000051!4.76e-31!13;CL:0000893!1.40e-30!6;CL:0002489!1.40e-30!6;CL:0000898!1.40e-30!6;CL:0000809!1.40e-30!6;CL:0000810!1.40e-30!6;CL:0000895!1.40e-30!6;CL:0000808!1.40e-30!6;CL:0000894!1.40e-30!6;CL:0000806!1.40e-30!6;CL:0000807!1.40e-30!6;CL:0000805!1.40e-30!6;CL:0002425!1.40e-30!6;CL:0002436!1.40e-30!6;CL:0002427!1.40e-30!6;CL:0002428!1.40e-30!6;CL:0002429!1.40e-30!6;CL:0002433!1.40e-30!6;CL:0002431!1.40e-30!6;CL:0002432!1.40e-30!6;CL:0000738!1.76e-23!17;CL:0002087!1.76e-23!17;CL:0002031!3.39e-19!25;CL:0000988!1.09e-14!32;CL:0002032!1.09e-14!32;CL:0000037!1.09e-14!32;CL:0000566!1.09e-14!32;CL:0000837!1.09e-14!32;CL:0002320!8.85e-10!46;CL:0000134!8.85e-10!46;CL:0000219!4.12e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.82e-78,9;CL:0000789,2.82e-78,9;CL:0002420,2.82e-78,9;CL:0002419,2.82e-78,9;CL:0000790,2.82e-78,9;CL:0000624,2.84e-69,8;CL:0000084,4.91e-64,11;CL:0000827,4.91e-64,11;CL:0000838,1.08e-58,12;CL:0000542,3.60e-54,13;CL:0000051,3.60e-54,13;CL:0000893,2.30e-52,6;CL:0002489,2.30e-52,6;CL:0000898,2.30e-52,6;CL:0000809,2.30e-52,6;CL:0000810,2.30e-52,6;CL:0000895,2.30e-52,6;CL:0000808,2.30e-52,6;CL:0000894,2.30e-52,6;CL:0000806,2.30e-52,6;CL:0000807,2.30e-52,6;CL:0000805,2.30e-52,6;CL:0002425,2.30e-52,6;CL:0002436,2.30e-52,6;CL:0002427,2.30e-52,6;CL:0002428,2.30e-52,6;CL:0002429,2.30e-52,6;CL:0002433,2.30e-52,6;CL:0002431,2.30e-52,6;CL:0002432,2.30e-52,6;CL:0000738,2.16e-41,17;CL:0002087,2.16e-41,17;CL:0002031,4.47e-28,25;CL:0000988,7.18e-22,32;CL:0002032,7.18e-22,32;CL:0000037,7.18e-22,32;CL:0000837,7.18e-22,32;CL:0002320,4.23e-15,46;CL:0000134,4.23e-15,46;CL:0000219,8.48e-13,54;CL:0000625,1.63e-10,1;CL:0000815,1.03e-09,1;CL:0000792,1.03e-09,1;CL:0000723,2.26e-07,91;CL:0000048,2.26e-07,91;CL:0000034,7.08e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.36e-29!23;UBERON:0000974!4.36e-29!23;UBERON:0004807!4.36e-29!23;UBERON:0005058!4.36e-29!23;UBERON:0003351!4.36e-29!23;UBERON:0009113!4.36e-29!23;UBERON:0003295!4.36e-29!23;UBERON:0009722!4.36e-29!23;UBERON:0005562!4.36e-29!23;UBERON:0007690!4.36e-29!23;UBERON:0006562!8.31e-28!24;UBERON:0003408!8.31e-28!24;UBERON:0001557!8.31e-28!24;UBERON:0001042!8.31e-28!24;UBERON:0008814!8.31e-28!24;UBERON:0009145!8.31e-28!24;UBERON:0000072!1.56e-24!27;UBERON:0004177!1.00e-22!29;UBERON:0000063!1.54e-18!35;UBERON:0002193!4.07e-18!48;UBERON:0002390!1.31e-16!45;UBERON:0003061!1.31e-16!45;UBERON:0000065!1.42e-15!41;UBERON:0001004!3.68e-15!42;UBERON:0005057!3.58e-12!51;UBERON:0002405!8.94e-12!70;UBERON:0003929!3.71e-11!55;UBERON:0002368!4.46e-10!60;UBERON:0002384!8.85e-10!46;UBERON:0002530!3.67e-09!65;UBERON:0000490!5.38e-09!66;UBERON:0003081!6.26e-09!88;UBERON:0005911!1.59e-08!69;UBERON:0000949!4.30e-08!72;UBERON:0000153!6.21e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.23e-15,46;UBERON:0002370,1.07e-13,23;UBERON:0000974,1.07e-13,23;UBERON:0004807,1.07e-13,23;UBERON:0005058,1.07e-13,23;UBERON:0003351,1.07e-13,23;UBERON:0009113,1.07e-13,23;UBERON:0003295,1.07e-13,23;UBERON:0009722,1.07e-13,23;UBERON:0005562,1.07e-13,23;UBERON:0007690,1.07e-13,23;UBERON:0006562,4.00e-13,24;UBERON:0003408,4.00e-13,24;UBERON:0001557,4.00e-13,24;UBERON:0001042,4.00e-13,24;UBERON:0008814,4.00e-13,24;UBERON:0009145,4.00e-13,24;UBERON:0000072,1.18e-11,27;UBERON:0004177,7.61e-11,29;UBERON:0005057,7.61e-11,29;UBERON:0000029,8.42e-10,1;UBERON:0001097,8.42e-10,1;UBERON:0003968,8.42e-10,1;UBERON:0001467,8.42e-10,1;UBERON:0000077,5.81e-09,35;UBERON:0007811,1.04e-08,36;UBERON:0002193,1.11e-08,48;UBERON:0002405,1.11e-08,48;UBERON:0000065,1.26e-07,41;UBERON:0001004,1.94e-07,42;UBERON:0000153,2.92e-07,43;UBERON:0002390,6.27e-07,45;UBERON:0003061,6.27e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,6.05391505252167,3.97909694747389,2.22583358693156,3.66951931378547,4.10881751834894,4.72070173062586,0,0,0,0,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07753499407941,9.41062637598899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:54838649..54838660,+ | |||
}} |
Latest revision as of 10:50, 4 August 2015
Short description: | p@chr14:54838649..54838660, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:54838649..54838660, + |
Coexpression cluster: | MCL_coexpression_mm9:1356 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.23e-15 | 46 |
thymus | 1.07e-13 | 23 |
neck | 1.07e-13 | 23 |
respiratory system epithelium | 1.07e-13 | 23 |
hemolymphoid system gland | 1.07e-13 | 23 |
pharyngeal epithelium | 1.07e-13 | 23 |
thymic region | 1.07e-13 | 23 |
pharyngeal gland | 1.07e-13 | 23 |
entire pharyngeal arch endoderm | 1.07e-13 | 23 |
thymus primordium | 1.07e-13 | 23 |
early pharyngeal endoderm | 1.07e-13 | 23 |
pharynx | 4.00e-13 | 24 |
gland of gut | 4.00e-13 | 24 |
upper respiratory tract | 4.00e-13 | 24 |
chordate pharynx | 4.00e-13 | 24 |
pharyngeal arch system | 4.00e-13 | 24 |
pharyngeal region of foregut | 4.00e-13 | 24 |
segment of respiratory tract | 1.18e-11 | 27 |
hemopoietic organ | 7.61e-11 | 29 |
immune organ | 7.61e-11 | 29 |
lymph node | 8.42e-10 | 1 |
axillary lymph node | 8.42e-10 | 1 |
peripheral lymph node | 8.42e-10 | 1 |
shoulder | 8.42e-10 | 1 |
mixed endoderm/mesoderm-derived structure | 5.81e-09 | 35 |
craniocervical region | 1.04e-08 | 36 |
hemolymphoid system | 1.11e-08 | 48 |
immune system | 1.11e-08 | 48 |
respiratory tract | 1.26e-07 | 41 |
respiratory system | 1.94e-07 | 42 |
anterior region of body | 2.92e-07 | 43 |
hematopoietic system | 6.27e-07 | 45 |
blood island | 6.27e-07 | 45 |