FFCP PHASE1:Mm9::chr7:134085482..134085488,+: Difference between revisions
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{{FFCP|EntrezGene=233877|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=-73bp_to_ENSMUST00000139233_5end|description=CAGE_peak_7_at_Kctd13_5end|id=chr7:134085482..134085488,+|ontology_enrichment_celltype=CL:0002610!1.32e-13!3;CL:0002614!1.77e-13!3|ontology_enrichment_celltype_v019_2=CL:0002610,1.85e-20,3;CL:0002614,6.17e-10,3;CL:0000117,3.03e-07,23;CL:0000337,3.03e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!2.70e-26!6;UBERON:0002616!9.59e-23!49;UBERON:0000955!3.10e-22!50;UBERON:0006238!3.10e-22!50;UBERON:0002950!1.18e-17!4;UBERON:0001891!1.18e-17!4;UBERON:0009616!1.18e-17!4;UBERON:0000033!4.46e-17!63;UBERON:0001017!1.99e-16!73;UBERON:0005743!1.99e-16!73;UBERON:0001049!2.82e-16!52;UBERON:0005068!2.82e-16!52;UBERON:0006241!2.82e-16!52;UBERON:0007135!2.82e-16!52;UBERON:0000073!6.51e-16!75;UBERON:0001016!6.51e-16!75;UBERON:0004684!1.32e-13!3;UBERON:0002275!1.32e-13!3;UBERON:0002038!1.77e-13!3;UBERON:0002308!1.77e-13!3;UBERON:0009663!1.77e-13!3;UBERON:0009661!1.77e-13!3;UBERON:0006331!1.77e-13!3;UBERON:0000125!1.77e-13!3;UBERON:0004733!4.99e-12!6;UBERON:0004732!4.99e-12!6;UBERON:0002028!4.99e-12!6;UBERON:0007277!4.99e-12!6;UBERON:0007811!9.41e-12!86;UBERON:0002346!3.10e-11!71;UBERON:0003075!3.10e-11!71;UBERON:0007284!3.10e-11!71;UBERON:0004121!6.46e-11!102;UBERON:0000924!6.46e-11!102;UBERON:0006601!6.46e-11!102;UBERON:0000153!1.66e-10!94;UBERON:0001896!2.71e-10!2;UBERON:0005290!2.71e-10!2;UBERON:0010096!2.71e-10!2;UBERON:0003076!3.58e-09!12;UBERON:0003057!3.58e-09!12;UBERON:0003080!3.84e-09!40;UBERON:0002420!6.93e-09!8;UBERON:0007245!6.93e-09!8;UBERON:0010009!6.93e-09!8;UBERON:0010011!6.93e-09!8;UBERON:0000454!6.93e-09!8;UBERON:0002780!1.59e-07!39;UBERON:0001890!1.59e-07!39;UBERON:0006240!1.59e-07!39;UBERON:0003056!3.54e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.85e-20,3;UBERON:0002275,1.85e-20,3;UBERON:0000073,6.00e-17,54;UBERON:0002950,6.41e-16,4;UBERON:0001891,6.41e-16,4;UBERON:0009616,6.41e-16,4;UBERON:0010286,6.41e-16,4;UBERON:0001896,2.94e-15,2;UBERON:0002298,2.94e-15,2;UBERON:0005290,2.94e-15,2;UBERON:0010096,2.94e-15,2;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0001049,3.19e-12,52;UBERON:0005068,3.19e-12,52;UBERON:0006241,3.19e-12,52;UBERON:0007135,3.19e-12,52;UBERON:0002616,3.48e-11,46;UBERON:0004733,5.11e-11,6;UBERON:0004732,5.11e-11,6;UBERON:0002028,5.11e-11,6;UBERON:0007277,5.11e-11,6;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0000955,6.29e-11,47;UBERON:0006238,6.29e-11,47;UBERON:0002038,6.17e-10,3;UBERON:0009663,6.17e-10,3;UBERON:0009661,6.17e-10,3;UBERON:0000125,6.17e-10,3;UBERON:0002308,6.17e-10,3;UBERON:0002346,9.74e-10,64;UBERON:0003075,9.74e-10,64;UBERON:0007284,9.74e-10,64;UBERON:0003076,1.33e-09,12;UBERON:0003057,1.33e-09,12;UBERON:0010371,2.10e-08,73;UBERON:0002259,2.98e-08,1;UBERON:0002314,2.98e-08,1;UBERON:0004061,2.98e-08,1;UBERON:0006777,2.98e-08,1;UBERON:0005882,2.98e-08,1;UBERON:0002420,3.18e-08,8;UBERON:0007245,3.18e-08,8;UBERON:0010009,3.18e-08,8;UBERON:0010011,3.18e-08,8;UBERON:0000454,3.18e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,1.0214987046815,2.30409799884365,0,0,0,1.3959149950069,0.56276261003168,1.68078072554491,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,2.24685959107234,1.83000241127451,0,0.521472960576829,0.255715457330331,1.24672826735736,1.46017136760982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,5.04010252346474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@Kctd13}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:233877 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-73bp_to_ENSMUST00000139233_5end | |||
|cluster_id=chr7:134085482..134085488,+ | |||
|description=CAGE_peak_7_at_Kctd13_5end | |||
|id=chr7:134085482..134085488,+ | |||
|ontology_enrichment_celltype=CL:0002610!1.32e-13!3;CL:0002614!1.77e-13!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.85e-20,3;CL:0002614,6.17e-10,3;CL:0000117,3.03e-07,23;CL:0000337,3.03e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!2.70e-26!6;UBERON:0002616!9.59e-23!49;UBERON:0000955!3.10e-22!50;UBERON:0006238!3.10e-22!50;UBERON:0002950!1.18e-17!4;UBERON:0001891!1.18e-17!4;UBERON:0009616!1.18e-17!4;UBERON:0000033!4.46e-17!63;UBERON:0001017!1.99e-16!73;UBERON:0005743!1.99e-16!73;UBERON:0001049!2.82e-16!52;UBERON:0005068!2.82e-16!52;UBERON:0006241!2.82e-16!52;UBERON:0007135!2.82e-16!52;UBERON:0000073!6.51e-16!75;UBERON:0001016!6.51e-16!75;UBERON:0004684!1.32e-13!3;UBERON:0002275!1.32e-13!3;UBERON:0002038!1.77e-13!3;UBERON:0002308!1.77e-13!3;UBERON:0009663!1.77e-13!3;UBERON:0009661!1.77e-13!3;UBERON:0006331!1.77e-13!3;UBERON:0000125!1.77e-13!3;UBERON:0004733!4.99e-12!6;UBERON:0004732!4.99e-12!6;UBERON:0002028!4.99e-12!6;UBERON:0007277!4.99e-12!6;UBERON:0007811!9.41e-12!86;UBERON:0002346!3.10e-11!71;UBERON:0003075!3.10e-11!71;UBERON:0007284!3.10e-11!71;UBERON:0004121!6.46e-11!102;UBERON:0000924!6.46e-11!102;UBERON:0006601!6.46e-11!102;UBERON:0000153!1.66e-10!94;UBERON:0001896!2.71e-10!2;UBERON:0005290!2.71e-10!2;UBERON:0010096!2.71e-10!2;UBERON:0003076!3.58e-09!12;UBERON:0003057!3.58e-09!12;UBERON:0003080!3.84e-09!40;UBERON:0002420!6.93e-09!8;UBERON:0007245!6.93e-09!8;UBERON:0010009!6.93e-09!8;UBERON:0010011!6.93e-09!8;UBERON:0000454!6.93e-09!8;UBERON:0002780!1.59e-07!39;UBERON:0001890!1.59e-07!39;UBERON:0006240!1.59e-07!39;UBERON:0003056!3.54e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.85e-20,3;UBERON:0002275,1.85e-20,3;UBERON:0000073,6.00e-17,54;UBERON:0002950,6.41e-16,4;UBERON:0001891,6.41e-16,4;UBERON:0009616,6.41e-16,4;UBERON:0010286,6.41e-16,4;UBERON:0001896,2.94e-15,2;UBERON:0002298,2.94e-15,2;UBERON:0005290,2.94e-15,2;UBERON:0010096,2.94e-15,2;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0001049,3.19e-12,52;UBERON:0005068,3.19e-12,52;UBERON:0006241,3.19e-12,52;UBERON:0007135,3.19e-12,52;UBERON:0002616,3.48e-11,46;UBERON:0004733,5.11e-11,6;UBERON:0004732,5.11e-11,6;UBERON:0002028,5.11e-11,6;UBERON:0007277,5.11e-11,6;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0000955,6.29e-11,47;UBERON:0006238,6.29e-11,47;UBERON:0002038,6.17e-10,3;UBERON:0009663,6.17e-10,3;UBERON:0009661,6.17e-10,3;UBERON:0000125,6.17e-10,3;UBERON:0002308,6.17e-10,3;UBERON:0002346,9.74e-10,64;UBERON:0003075,9.74e-10,64;UBERON:0007284,9.74e-10,64;UBERON:0003076,1.33e-09,12;UBERON:0003057,1.33e-09,12;UBERON:0010371,2.10e-08,73;UBERON:0002259,2.98e-08,1;UBERON:0002314,2.98e-08,1;UBERON:0004061,2.98e-08,1;UBERON:0006777,2.98e-08,1;UBERON:0005882,2.98e-08,1;UBERON:0002420,3.18e-08,8;UBERON:0007245,3.18e-08,8;UBERON:0010009,3.18e-08,8;UBERON:0010011,3.18e-08,8;UBERON:0000454,3.18e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,1.0214987046815,2.30409799884365,0,0,0,1.3959149950069,0.56276261003168,1.68078072554491,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,2.24685959107234,1.83000241127451,0,0.521472960576829,0.255715457330331,1.24672826735736,1.46017136760982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,5.04010252346474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Kctd13 | |||
}} |
Revision as of 06:11, 4 August 2015
Short description: | p7@Kctd13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Kctd13_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -73bp_to_ENSMUST00000139233_5end |
EntrezGene: | 233877 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.85e-20 | 3 |
neuron of the substantia nigra | 6.17e-10 | 3 |
CNS neuron (sensu Vertebrata) | 3.03e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.03e-07 | 23 |