FFCP PHASE1:Hg19::chr10:16824248..16824280,-: Difference between revisions
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|id=chr10:16824248..16824280,-
|short_description=p@chr10:16824248..16824280,-
|description=CAGE_peak_at_chr10:16824248..16824280,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:16824248..16824280,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr10:16824248..16824280,- | |||
|id=chr10:16824248..16824280,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.53e-66;3!UBERON:0005425;6.58e-50;1 | |||
|ontology_enrichment_disease=DOID:169!1.01e-09!6 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.00e-13;4!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7!DOID:3905;7.91e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.00e-13,4;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000941!7.13e-15!1;UBERON:0004904!7.13e-15!1;UBERON:0002464!7.13e-15!1;UBERON:0001021!7.13e-15!1;UBERON:0001785!7.13e-15!1;UBERON:0006834!1.84e-14!1;UBERON:0000010!7.04e-14!8;UBERON:0000966!8.78e-12!5;UBERON:0005388!8.78e-12!5;UBERON:0001802!8.78e-12!5;UBERON:0000013!1.76e-11!5;UBERON:0002410!1.76e-11!5;UBERON:0003714!4.38e-08!2;UBERON:0005162!4.38e-08!2;UBERON:0000122!4.38e-08!2;UBERON:0000073!4.73e-08!94;UBERON:0001016!4.73e-08!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.58e-50;1!UBERON:0001785;6.58e-50;1!UBERON:0002464;6.58e-50;1!UBERON:0004904;6.58e-50;1!UBERON:0001021;6.58e-50;1!UBERON:0003714;9.18e-26;2!UBERON:0005162;9.18e-26;2!UBERON:0000122;9.18e-26;2!UBERON:0000966;3.26e-11;5!UBERON:0005388;3.26e-11;5!UBERON:0001802;3.26e-11;5!UBERON:0002104;1.86e-10;21!UBERON:0001032;2.78e-09;24!UBERON:0004456;2.78e-09;24!UBERON:0000010;8.85e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.58e-50,1;UBERON:0001785,6.58e-50,1;UBERON:0002464,6.58e-50,1;UBERON:0004904,6.58e-50,1;UBERON:0001021,6.58e-50,1;UBERON:0003902,6.58e-50,1;UBERON:0005425,6.58e-50,1;UBERON:0000966,1.17e-33,6;UBERON:0005388,1.17e-33,6;UBERON:0001802,1.17e-33,6;UBERON:0003714,9.18e-26,2;UBERON:0005162,9.18e-26,2;UBERON:0000122,9.18e-26,2;UBERON:0001781,1.29e-13,4;UBERON:0000019,6.30e-11,20;UBERON:0000047,6.30e-11,20;UBERON:0010312,6.30e-11,20;UBERON:0004088,6.30e-11,20;UBERON:0010230,6.30e-11,20;UBERON:0003072,6.30e-11,20;UBERON:0004128,6.30e-11,20;UBERON:0003071,6.30e-11,20;UBERON:0000970,1.86e-10,21;UBERON:0002104,1.86e-10,21;UBERON:0001456,4.96e-10,22;UBERON:0000020,2.78e-09,24;UBERON:0001032,2.78e-09,24;UBERON:0004456,2.78e-09,24;UBERON:0005085,2.05e-07,31;UBERON:0000010,8.85e-07,8 | |||
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|short_description=p@chr10:16824248..16824280,- | |||
}} | }} |
Latest revision as of 12:09, 23 July 2015
Short description: | p@chr10:16824248..16824280, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:16824248..16824280, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.58e-50 | 1 |
cranial nerve | 6.58e-50 | 1 |
nerve trunk | 6.58e-50 | 1 |
nerve connecting eye with brain | 6.58e-50 | 1 |
nerve | 6.58e-50 | 1 |
retinal neural layer | 6.58e-50 | 1 |
presumptive neural retina | 6.58e-50 | 1 |
retina | 1.17e-33 | 6 |
photoreceptor array | 1.17e-33 | 6 |
posterior segment of eyeball | 1.17e-33 | 6 |
neural tissue | 9.18e-26 | 2 |
multi cell component structure | 9.18e-26 | 2 |
neuron projection bundle | 9.18e-26 | 2 |
layer of retina | 1.29e-13 | 4 |
camera-type eye | 6.30e-11 | 20 |
simple eye | 6.30e-11 | 20 |
immature eye | 6.30e-11 | 20 |
ocular region | 6.30e-11 | 20 |
eyeball of camera-type eye | 6.30e-11 | 20 |
optic cup | 6.30e-11 | 20 |
optic vesicle | 6.30e-11 | 20 |
eye primordium | 6.30e-11 | 20 |
eye | 1.86e-10 | 21 |
visual system | 1.86e-10 | 21 |
face | 4.96e-10 | 22 |
sense organ | 2.78e-09 | 24 |
sensory system | 2.78e-09 | 24 |
entire sense organ system | 2.78e-09 | 24 |
ectodermal placode | 2.05e-07 | 31 |
peripheral nervous system | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.00e-13 | 4 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |