FFCP PHASE2:Hg19::chr5:179233998..179234042,+
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| Short description: | p3@SQSTM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_SQSTM1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_NM_001142299, uc011dgs.1_5end |
| EntrezGene: | SQSTM1 |
| HGNC: | 11280 |
| UniProt: | Q13501 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p3@SQSTM1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 1.00e-13 | 250 |
| mesodermal cell | 1.22e-08 | 121 |
| kidney cell | 6.95e-08 | 17 |
| kidney epithelial cell | 6.95e-08 | 17 |
| neurectodermal cell | 8.23e-08 | 59 |
| columnar/cuboidal epithelial cell | 1.46e-07 | 27 |
| epithelial cell of nephron | 2.49e-07 | 15 |
| ectodermal cell | 4.57e-07 | 72 |
| muscle cell | 7.40e-07 | 55 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| cell layer | 8.39e-13 | 309 |
| epithelium | 1.11e-12 | 306 |
| brain | 2.65e-09 | 68 |
| future brain | 2.65e-09 | 68 |
| central nervous system | 3.31e-09 | 81 |
| ectoderm-derived structure | 3.74e-09 | 171 |
| ectoderm | 3.74e-09 | 171 |
| presumptive ectoderm | 3.74e-09 | 171 |
| nervous system | 3.98e-09 | 89 |
| neural plate | 4.26e-09 | 82 |
Showing 1 to 10 of 34 entries
