FFCP PHASE2:Hg19::chr9:139096968..139096979,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@LHX3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_LHX3_5end |
| Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
| Association with transcript: | -13bp_to_ENST00000371748, NM_178138, uc004cha.2_5end |
| EntrezGene: | LHX3 |
| HGNC: | 6595 |
| UniProt: | Q9UBR4F1T0D5 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@LHX3 |
|---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| Merkel cell | 1.13e-57 | 2 |
| keratinocyte | 8.09e-24 | 5 |
| stratified squamous epithelial cell | 4.86e-20 | 6 |
| keratin accumulating cell | 4.86e-20 | 6 |
| stratified epithelial cell | 4.86e-20 | 6 |
| keratinizing barrier epithelial cell | 4.86e-20 | 6 |
| epithelial fate stem cell | 4.86e-20 | 6 |
| stratified epithelial stem cell | 4.86e-20 | 6 |
| surface ectodermal cell | 4.86e-20 | 6 |
| neuron associated cell | 3.02e-14 | 17 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| gland of diencephalon | 1.76e-111 | 4 |
| neuroendocrine gland | 1.76e-111 | 4 |
| diencephalon | 4.15e-64 | 7 |
| future diencephalon | 4.15e-64 | 7 |
| pineal body | 6.36e-57 | 2 |
| regional part of epithalamus | 6.36e-57 | 2 |
| secretory circumventricular organ | 6.36e-57 | 2 |
| circumventricular organ | 6.36e-57 | 2 |
| epithalamus | 6.36e-57 | 2 |
| pituitary gland | 2.00e-56 | 2 |
Showing 1 to 10 of 39 entries
