FF:11418-118F5: Difference between revisions

Revision as of 15:57, 29 June 2012

Name:	Fibroblast - Dermal, donor3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skin
dev stage	41 years old adult
sex	female
age	41
cell type	fibroblast
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1375
catalog number	CA106-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.27
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.104
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.143
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0273
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.234
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.186
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0605
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.727
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0447
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.323
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.053
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.172
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-0.0223
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0955
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0343
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0537
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.129
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.182
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.204
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0605
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0605
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.161
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.625
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.204
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.054
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.844
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12028

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.738
MA0003.1	MA0003.1	0.356
MA0004.1	MA0004.1	0.51
MA0006.1	MA0006.1	0.8
MA0007.1	MA0007.1	0.0309
MA0009.1	MA0009.1	0.224
MA0014.1	MA0014.1	0.922
MA0017.1	MA0017.1	0.402
MA0018.2	MA0018.2	2.49176e-6
MA0019.1	MA0019.1	0.708
MA0024.1	MA0024.1	0.00138
MA0025.1	MA0025.1	7.52601e-5
MA0027.1	MA0027.1	0.659
MA0028.1	MA0028.1	0.0259
MA0029.1	MA0029.1	0.71
MA0030.1	MA0030.1	0.0171
MA0031.1	MA0031.1	0.163
MA0035.2	MA0035.2	0.0891
MA0038.1	MA0038.1	1.89264e-4
MA0039.2	MA0039.2	0.0778
MA0040.1	MA0040.1	0.549
MA0041.1	MA0041.1	0.732
MA0042.1	MA0042.1	0.399
MA0043.1	MA0043.1	2.58939e-8
MA0046.1	MA0046.1	0.229
MA0047.2	MA0047.2	0.577
MA0048.1	MA0048.1	0.0386
MA0050.1	MA0050.1	5.95606e-4
MA0051.1	MA0051.1	0.0435
MA0052.1	MA0052.1	0.466
MA0055.1	MA0055.1	0.324
MA0057.1	MA0057.1	0.296
MA0058.1	MA0058.1	0.542
MA0059.1	MA0059.1	0.0386
MA0060.1	MA0060.1	4.74086e-9
MA0061.1	MA0061.1	0.813
MA0062.2	MA0062.2	7.153e-8
MA0065.2	MA0065.2	0.179
MA0066.1	MA0066.1	0.0516
MA0067.1	MA0067.1	0.0252
MA0068.1	MA0068.1	0.0292
MA0069.1	MA0069.1	0.488
MA0070.1	MA0070.1	0.707
MA0071.1	MA0071.1	0.174
MA0072.1	MA0072.1	0.604
MA0073.1	MA0073.1	0.644
MA0074.1	MA0074.1	0.172
MA0076.1	MA0076.1	7.57305e-4
MA0077.1	MA0077.1	0.287
MA0078.1	MA0078.1	0.94
MA0079.2	MA0079.2	0.566
MA0080.2	MA0080.2	4.05485e-7
MA0081.1	MA0081.1	0.0238
MA0083.1	MA0083.1	0.253
MA0084.1	MA0084.1	0.422
MA0087.1	MA0087.1	0.489
MA0088.1	MA0088.1	0.106
MA0090.1	MA0090.1	0.177
MA0091.1	MA0091.1	0.216
MA0092.1	MA0092.1	0.424
MA0093.1	MA0093.1	0.62
MA0099.2	MA0099.2	0.913
MA0100.1	MA0100.1	0.511
MA0101.1	MA0101.1	0.0168
MA0102.2	MA0102.2	0.103
MA0103.1	MA0103.1	0.187
MA0104.2	MA0104.2	0.232
MA0105.1	MA0105.1	0.0884
MA0106.1	MA0106.1	0.0138
MA0107.1	MA0107.1	0.0204
MA0108.2	MA0108.2	0.312
MA0111.1	MA0111.1	0.63
MA0112.2	MA0112.2	0.00728
MA0113.1	MA0113.1	0.126
MA0114.1	MA0114.1	0.443
MA0115.1	MA0115.1	0.892
MA0116.1	MA0116.1	0.151
MA0117.1	MA0117.1	0.305
MA0119.1	MA0119.1	0.0325
MA0122.1	MA0122.1	0.284
MA0124.1	MA0124.1	0.917
MA0125.1	MA0125.1	0.0369
MA0131.1	MA0131.1	0.314
MA0135.1	MA0135.1	0.688
MA0136.1	MA0136.1	1.8344e-8
MA0137.2	MA0137.2	0.0843
MA0138.2	MA0138.2	0.376
MA0139.1	MA0139.1	0.851
MA0140.1	MA0140.1	0.179
MA0141.1	MA0141.1	0.0248
MA0142.1	MA0142.1	0.881
MA0143.1	MA0143.1	0.412
MA0144.1	MA0144.1	0.808
MA0145.1	MA0145.1	0.789
MA0146.1	MA0146.1	0.179
MA0147.1	MA0147.1	0.129
MA0148.1	MA0148.1	0.75
MA0149.1	MA0149.1	0.206
MA0150.1	MA0150.1	0.33
MA0152.1	MA0152.1	0.273
MA0153.1	MA0153.1	0.364
MA0154.1	MA0154.1	0.548
MA0155.1	MA0155.1	0.576
MA0156.1	MA0156.1	1.57815e-8
MA0157.1	MA0157.1	0.342
MA0159.1	MA0159.1	0.665
MA0160.1	MA0160.1	0.632
MA0162.1	MA0162.1	0.258
MA0163.1	MA0163.1	0.00134
MA0164.1	MA0164.1	0.797
MA0258.1	MA0258.1	0.0963
MA0259.1	MA0259.1	0.652

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12028

Novel motif	Logo	P-value
1	1	0.198
10	10	0.0474
100	100	0.312
101	101	0.911
102	102	0.686
103	103	0.495
104	104	0.625
105	105	0.0953
106	106	0.044
107	107	0.0637
108	108	0.0985
109	109	0.101
11	11	0.177
110	110	0.101
111	111	0.0512
112	112	0.206
113	113	0.015
114	114	0.0762
115	115	0.0801
116	116	0.0453
117	117	0.207
118	118	0.259
119	119	0.518
12	12	0.443
120	120	0.0775
121	121	0.519
122	122	0.0431
123	123	0.158
124	124	0.499
125	125	0.174
126	126	0.651
127	127	0.609
128	128	0.0456
129	129	0.565
13	13	0.575
130	130	0.665
131	131	0.607
132	132	0.298
133	133	0.381
134	134	0.4
135	135	0.385
136	136	0.931
137	137	0.227
138	138	0.899
139	139	0.518
14	14	0.145
140	140	0.382
141	141	0.684
142	142	0.388
143	143	0.195
144	144	0.708
145	145	0.0582
146	146	0.711
147	147	0.0555
148	148	0.0394
149	149	0.241
15	15	0.687
150	150	0.137
151	151	0.439
152	152	0.0166
153	153	0.269
154	154	0.667
155	155	0.234
156	156	0.268
157	157	0.745
158	158	0.13
159	159	0.491
16	16	0.0401
160	160	0.032
161	161	0.627
162	162	0.538
163	163	0.955
164	164	0.0233
165	165	0.678
166	166	0.842
167	167	0.45
168	168	0.599
169	169	0.023
17	17	0.291
18	18	0.0858
19	19	0.0312
2	2	0.587
20	20	0.667
21	21	0.00775
22	22	0.185
23	23	0.666
24	24	0.794
25	25	0.457
26	26	0.0995
27	27	0.235
28	28	0.179
29	29	0.119
3	3	0.242
30	30	0.987
31	31	0.608
32	32	2.18237e-5
33	33	0.397
34	34	0.806
35	35	0.628
36	36	0.233
37	37	0.0182
38	38	0.909
39	39	0.236
4	4	0.396
40	40	0.569
41	41	0.366
42	42	0.944
43	43	0.2
44	44	0.0218
45	45	0.754
46	46	0.0993
47	47	0.702
48	48	0.445
49	49	0.246
5	5	0.877
50	50	0.41
51	51	0.522
52	52	0.675
53	53	0.314
54	54	0.626
55	55	0.195
56	56	0.621
57	57	0.359
58	58	0.631
59	59	0.189
6	6	0.969
60	60	0.611
61	61	0.876
62	62	0.75
63	63	0.17
64	64	0.769
65	65	0.359
66	66	0.441
67	67	0.573
68	68	0.255
69	69	0.245
7	7	0.431
70	70	0.0969
71	71	0.129
72	72	0.537
73	73	0.00919
74	74	0.0176
75	75	0.115
76	76	0.602
77	77	0.0869
78	78	0.892
79	79	0.0345
8	8	0.00562
80	80	0.0212
81	81	0.422
82	82	0.732
83	83	0.191
84	84	0.425
85	85	0.135
86	86	0.942
87	87	0.139
88	88	0.245
89	89	0.303
9	9	0.421
90	90	0.598
91	91	0.365
92	92	0.107
93	93	0.995
94	94	0.315
95	95	0.0266
96	96	0.284
97	97	0.639
98	98	0.318
99	99	0.0151

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12028

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000062 human dermal fibroblast sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)
0002551 (fibroblast of dermis)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002097 (skin of body)
0002199 (integument)
0002100 (trunk)
0000483 (epithelium)
0002384 (connective tissue)
0000926 (mesoderm)
0000479 (tissue)
0000064 (organ part)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0004923 (organ component layer)
0005423 (developing anatomical structure)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0005291 (embryonic tissue)
0003102 (surface structure)
0000486 (multilaminar epithelium)
0003104 (mesenchyme)
0005256 (trunk mesenchyme)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0002067 (dermis)
0002329 (somite)
0002416 (integumental system)
0003077 (paraxial mesoderm)
0004290 (dermomyotome)
0009142 (entire embryonic mesenchyme)
0006603 (presumptive mesoderm)
0004016 (dermatome)
0010083 (future dermis)
0003059 (presomitic mesoderm)
0007282 (presumptive segmental plate)
0009618 (trunk paraxial mesoderm)
0007285 (presumptive paraxial mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr6:34204921..34204939,+!p3@HMGA1!1.91!2267.58!HMGA1;;chr2:239756671..239756732,+!p1@TWIST2!1.87!224.77!TWIST2;;chr2:239756739..239756755,+!p2@TWIST2!1.62!68.00!TWIST2;;chr1:170632285..170632309,+!p1@PRRX1!1.58!41.55!PRRX1;;chr12:66218836..66218888,+!p1@HMGA2!1.54!298.45!HMGA2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.54!33.63!ZBED1;;chr1:170633348..170633399,+!p2@PRRX1!1.52!43.64!PRRX1;;chr12:66218904..66218913,+!p11@HMGA2!1.47!28.25!HMGA2;;chr7:19157248..19157268,-!p1@TWIST1!1.44!71.59!TWIST1;;chr19:46801639..46801699,+!p1@HIF3A!1.42!25.56!HIF3A;;chr12:66218598..66218645,+!p2@HMGA2!1.39!104.76!HMGA2;;chr12:66218255..66218304,+!p3@HMGA2!1.39!62.02!HMGA2;;chr9:132427972..132428056,+!p1@PRRX2!1.37!29.29!PRRX2;;chr11:65687362..65687436,+!p3@DRAP1!1.33!91.46!DRAP1;;chr1:170632959..170632987,+!p4@PRRX1!1.33!22.27!PRRX1;;chr5:2751762..2751784,-!p1@IRX2!1.33!20.33!IRX2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.29!18.53!HOXC5;;chr15:57511609..57511651,+!p2@TCF12!1.28!29.89!TCF12;;chr9:132427883..132427951,+!p2@PRRX2!1.27!17.49!PRRX2;;chr1:170633262..170633285,+!p3@PRRX1!1.26!19.88!PRRX1;;chr11:65667884..65667895,-!p2@FOSL1!1.20!57.09!FOSL1;;chr12:66218923..66218934,+!p14@HMGA2!1.20!14.94!HMGA2;;chr12:54393880..54393962,+!p1@HOXC9!1.19!14.50!HOXC9;;chr17:59477233..59477263,+!p1@TBX2!1.18!43.04!TBX2;;chr12:66358080..66358094,+!p15@HMGA2!1.17!13.75!HMGA2;;chr8:25902876..25902936,-!p1@EBF2!1.15!13.00!EBF2;;chr22:19748231..19748317,+!p1@TBX1!1.14!12.85!TBX1;;chr4:174450089..174450153,-!p2@HAND2!1.13!12.40!HAND2;;chr1:170633058..170633084,+!p5@PRRX1!1.11!11.81!PRRX1;;chr12:66357214..66357233,+!p13@HMGA2!1.10!11.66!HMGA2;;chr2:102091566..102091581,-!p1@RFX8!1.10!11.51!RFX8;;chr12:54402745..54402788,+!p1@HOXC8!1.09!11.36!HOXC8;;chr11:65686732..65686756,+!p2@DRAP1!1.05!44.09!DRAP1;;chr11:65686802..65686818,+!p6@DRAP1!1.05!17.78!DRAP1;;chr12:66218212..66218244,+!p5@HMGA2!1.04!14.50!HMGA2;;chr2:19558373..19558392,-!p1@OSR1!1.03!26.75!OSR1;;chr3:12329397..12329433,+!p2@PPARG!1.02!21.67!PPARG;;chr17:59477275..59477286,+!p3@TBX2!1.02!12.55!TBX2;;chr3:12330560..12330579,+!p1@PPARG!1.02!11.06!PPARG;;chr12:54380036..54380091,+!p4@HOXC10!1.02!9.42!HOXC10;;chr8:128748308..128748324,+!p2@MYC!1.01!263.03!MYC;;chr12:54378923..54378966,+!p1@HOXC10!1.01!9.27!HOXC10;;chr16:86600426..86600441,+!p1@FOXC2!0.99!21.97!FOXC2;;chr7:27205106..27205134,-!p2@HOXA9!0.97!8.37!HOXA9;;chr20:55204351..55204377,+!p1@TFAP2C!0.96!10.46!TFAP2C;;chr1:170632723..170632739,+!p8@PRRX1!0.95!7.92!PRRX1;;chr12:53614115..53614154,-!p1@RARG!0.94!42.89!RARG;;chr7:19157043..19157088,-!p2@TWIST1!0.94!20.03!TWIST1;;chr6:85474299..85474324,-!p1@TBX18!0.93!13.90!TBX18;;chr5:174151553..174151610,+!p1@MSX2!0.90!11.96!MSX2;;chr18:52969844..52969895,-!p27@TCF4!0.90!6.87!TCF4;;chr6:34204973..34204990,+!p4@HMGA1!0.89!94.30!HMGA1;;chr8:49833948..49833973,-!p2@SNAI2!0.89!44.69!SNAI2;;chr6:1312325..1312340,+!p1@FOXQ1!0.89!11.21!FOXQ1;;chr3:141121847..141121868,+!p5@ZBTB38!0.89!10.46!ZBTB38;;chr11:65687222..65687240,+!p7@DRAP1!0.89!8.82!DRAP1;;chr4:174451370..174451387,-!p1@HAND2!0.89!6.73!HAND2;;chr11:47279504..47279563,+!p1@NR1H3!0.88!15.54!NR1H3;;chr17:46687959..46688007,-!p2@HOXB7!0.88!9.27!HOXB7;;chr12:115122318..115122331,-!p2@TBX3!0.87!6.43!TBX3;;chr2:176994408..176994492,+!p1@HOXD8!0.87!6.43!HOXD8;;chr5:2751785..2751808,-!p2@IRX2!0.87!6.43!IRX2;;chr14:24837368..24837401,+!p1@NFATC4!0.86!15.24!NFATC4;;chr3:12329358..12329393,+!p3@PPARG!0.85!15.69!PPARG;;chr12:66218183..66218209,+!p4@HMGA2!0.85!12.11!HMGA2;;chr17:46688334..46688385,-!p1@HOXB7!0.85!9.12!HOXB7;;chr6:85473156..85473210,-!p2@TBX18!0.85!7.47!TBX18;;chr6:34204672..34204692,+!p1@HMGA1!0.84!720.04!HMGA1;;chr7:44143925..44143970,+!p1@AEBP1!0.83!138.39!AEBP1;;chr11:65667846..65667868,-!p1@FOSL1!0.82!159.61!FOSL1;;chr11:65687243..65687276,+!p8@DRAP1!0.82!7.77!DRAP1;;chr15:42749722..42749739,-!p2@ZFP106!0.81!10.31!ZFP106;;chr17:46675420..46675465,-!p3@HOXB6!0.81!6.43!HOXB6;;chr17:46675558..46675577,-!p2@HOXB6!0.80!5.38!HOXB6;;chr12:54380404..54380433,+!p3@HOXC10!0.80!5.38!HOXC10;;chr12:54402790..54402805,+!p2@HOXC8!0.80!5.38!HOXC8;;chr12:54422217..54422239,+!p3@HOXC6!0.80!5.38!HOXC6;;chr11:65687158..65687216,+!p4@DRAP1!0.79!32.43!DRAP1;;chr11:46299199..46299233,+!p1@CREB3L1!0.79!28.84!CREB3L1;;chr12:66218378..66218401,+!p6@HMGA2!0.79!8.37!HMGA2;;chr6:1389789..1389821,+!p1@FOXF2!0.79!7.32!FOXF2;;chr16:86600870..86600921,+!p2@FOXC2!0.79!5.23!FOXC2;;chr17:59477403..59477414,+!p4@TBX2!0.79!5.23!TBX2;;chr15:96874145..96874166,+!p7@NR2F2!0.78!10.16!NR2F2;;chr2:223163706..223163730,-!p1@PAX3!0.77!4.93!PAX3;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.77!4.93!HOXC5;;chr12:115121770..115121781,-!p4@TBX3!0.76!4.78!TBX3;;chr12:54379029..54379057,+!p2@HOXC10!0.76!4.78!HOXC10;;chr12:66218420..66218439,+!p12@HMGA2!0.76!4.78!HMGA2;;chr6:1389989..1390019,+!p2@FOXF2!0.76!4.78!FOXF2;;chr7:27192185..27192209,-!p1@HOXA3!0.76!4.78!HOXA3;;chr7:27205136..27205164,-!p1@HOXA9!0.76!4.78!HOXA9;;chr5:133450365..133450444,+!p1@TCF7!0.75!23.31!TCF7;;chr5:321810..321877,+!p1@AHRR!0.75!15.84!AHRR;;chr5:3595934..3595957,+!p2@IRX1!0.75!4.63!IRX1;;chr7:27224842..27224872,-!p1@HOXA11!0.75!4.63!HOXA11;;chr12:115121962..115121987,-!p1@TBX3!0.74!41.85!TBX3;;chr17:41622925..41622976,-!p3@ETV4!0.74!7.02!ETV4;;chr17:46682321..46682362,-!p1@HOXB6!0.74!4.48!HOXB6;;chr5:174151612..174151633,+!p2@MSX2!0.74!4.48!MSX2;;chr1:170632250..170632277,+!p7@PRRX1!0.74!4.48!PRRX1;;chr17:61919985..61920012,-!p3@SMARCD2!0.73!11.66!SMARCD2;;chr3:141105705..141105770,+!p4@ZBTB38!0.73!5.38!ZBTB38;;chr8:49833978..49833996,-!p1@SNAI2!0.72!98.34!SNAI2;;chr7:14029283..14029311,-!p1@ETV1!0.72!25.26!ETV1;;chr15:96874244..96874259,+!p5@NR2F2!0.72!11.21!NR2F2;;chr11:113930425..113930471,+!p1@ZBTB16!0.72!6.43!ZBTB16;;chr12:66218443..66218461,+!p8@HMGA2!0.72!5.68!HMGA2;;chr15:83953397..83953425,-!p1@BNC1!0.72!4.93!BNC1;;chr7:44143978..44143989,+!p2@AEBP1!0.71!8.07!AEBP1;;chr12:66218469..66218477,+!p16@HMGA2!0.71!4.18!HMGA2;;chr17:59477197..59477212,+!p2@TBX2!0.70!7.47!TBX2;;chr15:96875041..96875052,+!p17@NR2F2!0.70!6.13!NR2F2;;chr1:170632762..170632786,+!p13@PRRX1!0.70!4.04!PRRX1;;chr12:66218573..66218596,+!p7@HMGA2!0.69!6.13!HMGA2;;chr2:200322654..200322707,-!p2@SATB2!0.69!5.98!SATB2;;chr1:170632137..170632172,+!p10@PRRX1!0.69!3.89!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.69!3.89!PRRX1;;chr7:27224795..27224840,-!p2@HOXA11!0.69!3.89!HOXA11;;chr1:158979792..158979814,+!p2@IFI16!0.68!41.70!IFI16;;chr1:170633100..170633112,+!p19@PRRX1!0.68!3.74!PRRX1;;chr12:85673977..85674015,+!p1@ALX1!0.68!3.74!ALX1;;chr3:157823517..157823562,-!p1@SHOX2!0.67!4.04!SHOX2;;chr17:45810594..45810608,+!p1@TBX21!0.66!3.59!TBX21;;chr6:34205372..34205412,+!p5@HMGA1!0.65!20.33!HMGA1;;chr15:96876966..96877017,+!p12@NR2F2!0.65!5.23!NR2F2;;chr15:57511589..57511608,+!p4@TCF12!0.65!3.44!TCF12;;chr5:3595977..3595999,+!p1@IRX1!0.65!3.44!IRX1;;chr2:102091478..102091490,-!p3@RFX8!0.65!3.44!RFX8;;chr11:46299539..46299620,+!p2@CREB3L1!0.64!6.13!CREB3L1;;chr12:96588143..96588185,+!p1@ELK3!0.63!46.78!ELK3;;chr14:61116183..61116208,-!p1@SIX1!0.63!14.50!SIX1;;chr17:41623009..41623053,-!p4@ETV4!0.63!5.68!ETV4;;chr10:119303078..119303169,+!p2@EMX2!0.63!3.29!EMX2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!0.63!3.29!POU3F3;;chr2:119604456..119604501,-!p2@EN1!0.63!3.29!EN1;;chr2:175199697..175199706,+!p2@SP9!0.63!3.29!SP9;;chr3:138665937..138665968,-!p1@FOXL2!0.63!3.29!FOXL2;;chr3:138665969..138665993,-!p2@FOXL2!0.63!3.29!FOXL2;;chr1:170632310..170632321,+!p15@PRRX1!0.63!3.29!PRRX1;;chr19:13134772..13134822,+!p2@NFIX!0.62!4.93!NFIX;;chrX:66763856..66763896,+!p1@AR!0.62!4.93!AR;;chr1:170633245..170633256,+!p14@PRRX1!0.62!3.14!PRRX1;;chr18:52969674..52969685,-!p24@TCF4!0.62!3.14!TCF4;;chr15:96874012..96874042,+!p2@NR2F2!0.61!32.88!NR2F2;;chr15:96873984..96873999,+!p3@NR2F2!0.60!26.30!NR2F2;;chr12:10875351..10875422,-!p4@CSDA!0.60!6.43!CSDA;;chr15:96874216..96874236,+!p13@NR2F2!0.60!5.08!NR2F2;;chr19:13135386..13135435,+!p4@NFIX!0.60!2.99!NFIX;;chr5:3595961..3595975,+!p3@IRX1!0.60!2.99!IRX1;;chr7:27213893..27213954,-!p1@HOXA10!0.60!2.99!HOXA10;;chr1:170632028..170632043,+!p20@PRRX1!0.60!2.99!PRRX1;;chr1:170632115..170632136,+!p9@PRRX1!0.60!2.99!PRRX1;;chr2:119605214..119605230,-!p1@EN1!0.60!2.99!EN1;;chr2:19558327..19558334,-!p2@OSR1!0.60!2.99!OSR1;;chr3:37217736..37217753,-!p2@LRRFIP2!0.59!14.20!LRRFIP2;;chr17:46691732..46691766,-!p4@HOXB8!0.58!2.84!HOXB8;;chr19:47523058..47523114,+!p1@NPAS1!0.58!2.84!NPAS1;;chr1:170632439..170632465,+!p11@PRRX1!0.58!2.84!PRRX1;;chr20:42543441..42543497,+!p1@TOX2!0.57!14.80!TOX2;;chr3:21792585..21792625,-!p2@ZNF385D!0.57!3.14!ZNF385D;;chr11:65688877..65688891,+!p13@DRAP1!0.57!2.69!DRAP1;;chr16:86612320..86612394,+!p1@FOXL1!0.57!2.69!FOXL1;;chr17:1958388..1958404,+!p1@HIC1!0.56!20.47!HIC1;;chr17:46622070..46622109,-!p1@HOXB2!0.56!6.73!HOXB2;;chr2:200323414..200323455,-!p1@SATB2!0.56!6.43!SATB2;;chr7:113726357..113726443,+!p1@FOXP2!0.56!5.08!FOXP2;;chr15:96869114..96869160,+!p11@NR2F2!0.56!3.89!NR2F2;;chr11:65686776..65686787,+!p9@DRAP1!0.56!3.29!DRAP1;;chr20:39946361..39946379,-!p2@ZHX3!0.55!9.12!ZHX3;;chr7:44143997..44144008,+!p3@AEBP1!0.55!3.44!AEBP1;;chr1:170632051..170632081,+!p16@PRRX1!0.55!2.54!PRRX1;;chr12:54402729..54402743,+!p3@HOXC8!0.55!2.54!HOXC8;;chr17:46675469..46675481,-!p4@HOXB6!0.55!2.54!HOXB6;;chr17:46690839..46690884,-!p1@HOXB8!0.55!2.54!HOXB8;;chr14:21566731..21566836,-!p1@ZNF219!0.54!33.18!ZNF219;;chr12:96588219..96588263,+!p2@ELK3!0.54!22.27!ELK3;;chr11:65686952..65686975,+!p5@DRAP1!0.54!16.89!DRAP1;;chr11:113930291..113930339,+!p2@ZBTB16!0.54!4.48!ZBTB16;;chr7:28448965..28448994,+!p2@CREB5!0.53!10.16!CREB5;;chr9:110250697..110250738,-!p2@KLF4!0.53!2.99!KLF4;;chr7:14028488..14028516,-!p2@ETV1!0.53!2.69!ETV1;;chr7:27196267..27196311,-!p1@HOXA7!0.53!2.39!HOXA7;;chr11:63684602..63684664,-!p1@RCOR2!0.51!5.23!RCOR2;;chr11:47279248..47279264,+!p3@NR1H3!0.51!2.69!NR1H3;;chr10:119302645..119302712,+!p3@EMX2!0.51!2.24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150946015..150946070,-!p3@SMARCD3!0.13!1.79!SMARCD3;;chr18:3449527..3449582,+!p6@TGIF1!0.13!1.49!TGIF1;;chr17:7382834..7382855,-!p6@ZBTB4!0.13!1.20!ZBTB4;;chr13:41635104..41635124,-!p6@ELF1!0.13!1.20!ELF1;;chr9:20621927..20621996,-!p3@MLLT3!0.13!1.20!MLLT3;;chr8:145159277..145159282,+!p7@MAF1!0.13!1.05!MAF1;;chr2:174830540..174830563,-!p8@SP3!0.13!0.90!SP3;;chr13:46549911..46549956,-!p3@ZC3H13!0.13!0.90!ZC3H13;;chr19:4066782..4066802,-!p7@ZBTB7A!0.13!0.75!ZBTB7A;;chr2:113057415..113057477,+!p3@ZC3H6!0.13!0.75!ZC3H6;;chr2:46602879..46602899,+!p8@EPAS1!0.13!0.60!EPAS1;;chr3:141121369..141121392,+!p14@ZBTB38!0.13!0.60!ZBTB38;;chr3:75834722..75834733,-!p2@ZNF717!0.13!0.60!ZNF717;;chr14:33408072..33408114,+!p2@NPAS3!0.13!0.60!NPAS3;;chr7:100076873..100076880,-!p6@TSC22D4!0.13!0.60!TSC22D4;;chr19:47425425..47425441,+!p2@ARHGAP35!0.13!0.60!ARHGAP35;;chr10:63851669..63851682,+!p10@ARID5B!0.13!0.45!ARID5B;;chr6:41555169..41555196,+!p6@FOXP4!0.13!0.45!FOXP4;;chr1:8938709..8938720,-!p3@ENO1!0.12!57.69!ENO1;;chr11:57103327..57103372,-!p1@SSRP1!0.12!56.04!SSRP1;;chr19:42759266..42759290,-!p1@ERF!0.12!37.81!ERF;;chr12:132628963..132629027,+!p1@NOC4L!0.12!16.89!NOC4L;;chr9:35732592..35732640,+!p1@CREB3!0.12!15.09!CREB3;;chr19:59031131..59031193,-!p1@ZBTB45!0.12!15.09!ZBTB45;;chr17:38219209..38219230,+!p1@THRA!0.12!14.80!THRA;;chr9:88969339..88969422,-!p2@ZCCHC6!0.12!8.67!ZCCHC6;;chr1:120190786..120190915,-!p1@ZNF697!0.12!7.92!ZNF697;;chr19:344786..344826,-!p1@MIER2!0.12!6.28!MIER2;;chr1:249153268..249153298,-!p1@ZNF692!0.12!5.68!ZNF692;;chr2:174830564..174830605,-!p3@SP3!0.12!5.08!SP3;;chr22:50247449..50247515,+!p1@ZBED4!0.12!4.63!ZBED4;;chr9:130954041..130954121,-!p2@CIZ1!0.12!4.33!CIZ1;;chr19:44617538..44617598,+!p1@ZNF225!0.12!3.89!ZNF225;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!0.12!3.74!HNRPK;;chr11:65430554..65430579,-!p3@RELA!0.12!2.24!RELA;;chr1:249153232..249153251,-!p2@ZNF692!0.12!1.94!ZNF692;;chr19:44037546..44037594,+!p1@ZNF575!0.12!1.64!ZNF575;;chr10:43932296..43932360,+!p1@ZNF487P!0.12!1.64!ZNF487P;;chr6:26659967..26659982,-!p1@ZNF322P1,p1@ZNF322!0.12!1.64!ZNF322;;chr2:11606283..11606289,-!p1@E2F6!0.12!1.64!E2F6;;chr19:45004584..45004601,-!p2@ZNF180!0.12!1.49!ZNF180;;chr15:37390850..37390909,-!p3@MEIS2!0.12!1.49!MEIS2;;chr2:231280954..231280965,+!p2@SP100!0.12!1.35!SP100;;chr19:58666441..58666478,-!p2@ZNF329!0.12!1.20!ZNF329;;chr6:144329531..144329546,-!p5@PLAGL1!0.12!1.05!PLAGL1;;chr8:72756267..72756296,-!p4@MSC!0.12!0.90!MSC;;chr18:3448422..3448439,+!p11@TGIF1!0.12!0.90!TGIF1;;chr16:68573640..68573660,+!p3@ZFP90!0.12!0.75!ZFP90;;chr14:21566540..21566580,-!p2@ZNF219!0.12!0.75!ZNF219;;chr1:8926369..8926385,-!p12@ENO1!0.12!0.75!ENO1;;chr16:86544113..86544145,+!p1@FOXF1!0.12!0.60!FOXF1;;chr9:73028462..73028491,-!p8@KLF9!0.12!0.60!KLF9;;chr2:145275211..145275220,-!p14@ZEB2!0.12!0.60!ZEB2;;chr22:29196433..29196445,-!p4@XBP1!0.12!0.45!XBP1;;chr15:67418119..67418162,+!p5@SMAD3!0.12!0.45!SMAD3;;chr15:96876340..96876348,+!p22@NR2F2!0.12!0.45!NR2F2;;chr17:46622440..46622477,-!p5@HOXB2!0.12!0.45!HOXB2;;chr6:21594252..21594285,+!p11@SOX4!0.12!0.45!SOX4;;chr19:45579762..45579772,-!p2@ZNF296!0.12!0.45!ZNF296;;chr13:74707894..74707947,-!p6@KLF12!0.12!0.45!KLF12;;chr9:86595113..86595141,-!p1@HNRNPK!0.11!279.17!HNRPK;;

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FF:11418-118F5: Difference between revisions

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Revision as of 15:57, 29 June 2012

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