FFCP PHASE1:Hg19::chr6:148663894..148663959,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!7.81e-13!42;CL:0000860!1.28e-11!45;CL:0002139!1.70e-11!24;CL:0000115!3.53e-11!35;CL:0002194!5.93e-11!63;CL:0000576!5.93e-11!63;CL:0000040!5.93e-11!63;CL:0000559!5.93e-11!63;CL:0002009!7.07e-10!65;CL:0000071!3.00e-09!18;CL:0002546!3.00e-09!18;CL:0002078!3.46e-09!44;CL:0000839!2.11e-07!70;CL:0000557!4.27e-07!71 | |ontology_enrichment_celltype=CL:0002057!7.81e-13!42;CL:0000860!1.28e-11!45;CL:0002139!1.70e-11!24;CL:0000115!3.53e-11!35;CL:0002194!5.93e-11!63;CL:0000576!5.93e-11!63;CL:0000040!5.93e-11!63;CL:0000559!5.93e-11!63;CL:0002009!7.07e-10!65;CL:0000071!3.00e-09!18;CL:0002546!3.00e-09!18;CL:0002078!3.46e-09!44;CL:0000839!2.11e-07!70;CL:0000557!4.27e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.55e-12;33!CL:0002057;2.55e-12;33!CL:0002139;4.33e-12;24!CL:0000115;8.30e-11;36!CL:0000071;7.72e-10;18!CL:0000473;9.93e-10;39!CL:0000234;9.93e-10;39!CL:0000576;1.44e-09;48!CL:0002078;6.38e-07;45 | |ontology_enrichment_celltype_v019=CL:0000860;2.55e-12;33!CL:0002057;2.55e-12;33!CL:0002139;4.33e-12;24!CL:0000115;8.30e-11;36!CL:0000071;7.72e-10;18!CL:0000473;9.93e-10;39!CL:0000234;9.93e-10;39!CL:0000576;1.44e-09;48!CL:0002078;6.38e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.05e-13,42;CL:0002057,5.05e-13,42;CL:0000473,2.77e-12,48;CL:0000234,2.77e-12,48;CL:0000115,5.70e-12,36;CL:0002194,7.16e-12,59;CL:0000576,7.16e-12,59;CL:0000040,7.16e-12,59;CL:0000559,7.16e-12,59;CL:0002139,9.91e-12,24;CL:0002009,1.23e-10,61;CL:0000071,1.98e-09,18;CL:0002546,1.98e-09,18;CL:0002078,2.59e-09,45;CL:0000839,5.03e-08,66;CL:0000557,1.42e-07,67;CL:0000213,6.23e-07,58;CL:0000215,6.23e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;7.72e-10;18!CL:0002057;9.80e-10;42 | |ontology_enrichment_development_v019=CL:0002546;7.72e-10;18!CL:0002057;9.80e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.17e-28!659;UBERON:0000467!6.19e-21!625;UBERON:0000480!1.55e-20!626;UBERON:0000062!4.99e-18!511;UBERON:0000922!1.78e-17!612;UBERON:0007023!1.82e-17!115;UBERON:0002050!1.92e-16!605;UBERON:0005423!1.92e-16!605;UBERON:0000923!4.87e-16!604;UBERON:0005291!4.87e-16!604;UBERON:0006598!4.87e-16!604;UBERON:0002532!4.87e-16!604;UBERON:0004111!8.85e-10!241;UBERON:0001986!3.00e-09!18;UBERON:0004638!3.00e-09!18;UBERON:0004852!3.00e-09!18;UBERON:0006914!1.19e-08!25;UBERON:0002346!3.41e-08!90;UBERON:0001049!4.08e-08!57;UBERON:0005068!4.08e-08!57;UBERON:0006241!4.08e-08!57;UBERON:0007135!4.08e-08!57;UBERON:0000477!4.51e-08!286;UBERON:0000025!4.56e-08!194;UBERON:0000487!5.12e-08!22;UBERON:0005743!6.59e-08!86;UBERON:0003075!1.35e-07!86;UBERON:0007284!1.35e-07!86;UBERON:0000073!1.52e-07!94;UBERON:0001016!1.52e-07!94;UBERON:0001017!1.89e-07!82;UBERON:0000955!4.94e-07!69;UBERON:0006238!4.94e-07!69;UBERON:0002616!7.21e-07!59;UBERON:0002405!8.04e-07!115 | |ontology_enrichment_uberon=UBERON:0000468!2.17e-28!659;UBERON:0000467!6.19e-21!625;UBERON:0000480!1.55e-20!626;UBERON:0000062!4.99e-18!511;UBERON:0000922!1.78e-17!612;UBERON:0007023!1.82e-17!115;UBERON:0002050!1.92e-16!605;UBERON:0005423!1.92e-16!605;UBERON:0000923!4.87e-16!604;UBERON:0005291!4.87e-16!604;UBERON:0006598!4.87e-16!604;UBERON:0002532!4.87e-16!604;UBERON:0004111!8.85e-10!241;UBERON:0001986!3.00e-09!18;UBERON:0004638!3.00e-09!18;UBERON:0004852!3.00e-09!18;UBERON:0006914!1.19e-08!25;UBERON:0002346!3.41e-08!90;UBERON:0001049!4.08e-08!57;UBERON:0005068!4.08e-08!57;UBERON:0006241!4.08e-08!57;UBERON:0007135!4.08e-08!57;UBERON:0000477!4.51e-08!286;UBERON:0000025!4.56e-08!194;UBERON:0000487!5.12e-08!22;UBERON:0005743!6.59e-08!86;UBERON:0003075!1.35e-07!86;UBERON:0007284!1.35e-07!86;UBERON:0000073!1.52e-07!94;UBERON:0001016!1.52e-07!94;UBERON:0001017!1.89e-07!82;UBERON:0000955!4.94e-07!69;UBERON:0006238!4.94e-07!69;UBERON:0002616!7.21e-07!59;UBERON:0002405!8.04e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.72e-10;18!UBERON:0001986;7.72e-10;18!UBERON:0004852;7.72e-10;18!UBERON:0006914;4.68e-09;25!UBERON:0000487;1.63e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0004638;7.72e-10;18!UBERON:0001986;7.72e-10;18!UBERON:0004852;7.72e-10;18!UBERON:0006914;4.68e-09;25!UBERON:0000487;1.63e-08;22 | ||
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| ||
|short_description=p3@SASH1 | |short_description=p3@SASH1 | ||
}} | }} |
Revision as of 09:52, 17 November 2012
Short description: | p3@SASH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SASH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 165bp_to_ENST00000367467, NM_015278, uc003qme.1_5end |
EntrezGene: | SASH1 |
HGNC: | 19182 |
UniProt: | O94885 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.05e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.05e-13 | 42 |
defensive cell | 2.77e-12 | 48 |
phagocyte | 2.77e-12 | 48 |
endothelial cell | 5.70e-12 | 36 |
monopoietic cell | 7.16e-12 | 59 |
monocyte | 7.16e-12 | 59 |
monoblast | 7.16e-12 | 59 |
promonocyte | 7.16e-12 | 59 |
endothelial cell of vascular tree | 9.91e-12 | 24 |
macrophage dendritic cell progenitor | 1.23e-10 | 61 |
blood vessel endothelial cell | 1.98e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.98e-09 | 18 |
meso-epithelial cell | 2.59e-09 | 45 |
myeloid lineage restricted progenitor cell | 5.03e-08 | 66 |
granulocyte monocyte progenitor cell | 1.42e-07 | 67 |
lining cell | 6.23e-07 | 58 |
barrier cell | 6.23e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.99e-17 | 114 |
embryo | 2.83e-12 | 592 |
embryonic structure | 1.91e-11 | 564 |
germ layer | 2.20e-11 | 560 |
germ layer / neural crest | 2.20e-11 | 560 |
embryonic tissue | 2.20e-11 | 560 |
presumptive structure | 2.20e-11 | 560 |
germ layer / neural crest derived structure | 2.20e-11 | 560 |
epiblast (generic) | 2.20e-11 | 560 |
developing anatomical structure | 3.16e-11 | 581 |
blood vessel endothelium | 1.98e-09 | 18 |
endothelium | 1.98e-09 | 18 |
cardiovascular system endothelium | 1.98e-09 | 18 |
squamous epithelium | 8.11e-09 | 25 |
simple squamous epithelium | 3.61e-08 | 22 |
anatomical conduit | 5.13e-08 | 240 |
neurectoderm | 8.05e-08 | 86 |
neural tube | 8.86e-08 | 56 |
neural rod | 8.86e-08 | 56 |
future spinal cord | 8.86e-08 | 56 |
neural keel | 8.86e-08 | 56 |
immune system | 1.41e-07 | 93 |
neural plate | 3.21e-07 | 82 |
presumptive neural plate | 3.21e-07 | 82 |
skeletal system | 4.94e-07 | 100 |
regional part of nervous system | 5.47e-07 | 53 |
regional part of brain | 5.47e-07 | 53 |
central nervous system | 6.67e-07 | 81 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.