FFCP PHASE1:Hg19::chr13:100634130..100634143,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7546|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12873|TSSclassifier=S|UniProt=O95409|association_with_transcript=104bp_to_ENST00000376335,NM_007129_5end|coexpression_cluster_id=C1375|description=CAGE_peak_3_at_ZIC2_5end|id=chr13:100634130..100634143,+|ontology_enrichment_celltype=CL:0002319!3.35e-10!25;CL:0000133!3.21e-07!59;CL:0000047!5.84e-07!8|ontology_enrichment_celltype_v019=CL:0002319;9.55e-13;25!CL:0002322;7.41e-08;5|ontology_enrichment_celltype_v019_2=CL:0002319,8.44e-13,25;CL:0000133,8.99e-10,59;CL:0000047,9.80e-09,8;CL:0002322,7.47e-08,5|ontology_enrichment_development_v019=UBERON:0006238;1.30e-07;10!UBERON:0006601;3.77e-07;82|ontology_enrichment_disease=DOID:162!1.67e-31!235;DOID:0050687!4.65e-31!143;DOID:14566!6.95e-30!239;DOID:305!5.96e-23!106;DOID:299!1.89e-10!25;DOID:0050686!3.03e-09!137|ontology_enrichment_disease_v019=DOID:299;1.07e-08;25!DOID:0050687;9.25e-07;143|ontology_enrichment_disease_v019_2=DOID:0050687,3.05e-22,143;DOID:162,2.20e-19,235;DOID:14566,2.04e-18,239;DOID:305,9.26e-15,106;DOID:299,1.70e-08,25;DOID:0050686,4.33e-07,137|ontology_enrichment_uberon=UBERON:0001017!4.87e-34!82;UBERON:0005743!2.57e-33!86;UBERON:0000073!4.37e-33!94;UBERON:0001016!4.37e-33!94;UBERON:0000955!6.93e-26!69;UBERON:0006238!6.93e-26!69;UBERON:0002346!7.64e-24!90;UBERON:0001049!1.74e-21!57;UBERON:0005068!1.74e-21!57;UBERON:0006241!1.74e-21!57;UBERON:0007135!1.74e-21!57;UBERON:0002616!3.06e-21!59;UBERON:0003075!3.97e-21!86;UBERON:0007284!3.97e-21!86;UBERON:0000924!1.47e-20!173;UBERON:0006601!1.47e-20!173;UBERON:0004121!2.18e-18!169;UBERON:0000033!5.14e-16!123;UBERON:0000153!3.24e-14!129;UBERON:0007811!3.24e-14!129;UBERON:0002780!2.63e-13!41;UBERON:0001890!2.63e-13!41;UBERON:0006240!2.63e-13!41;UBERON:0003056!3.72e-13!61;UBERON:0003080!9.88e-13!42;UBERON:0001893!1.01e-11!34;UBERON:0002791!2.89e-11!33;UBERON:0002020!3.39e-11!34;UBERON:0003528!3.39e-11!34;UBERON:0003076!8.16e-11!15;UBERON:0003057!8.16e-11!15;UBERON:0001869!1.02e-10!32;UBERON:0000956!2.63e-10!25;UBERON:0000203!2.63e-10!25;UBERON:0004732!2.87e-10!13;UBERON:0004733!7.06e-10!12;UBERON:0002028!7.06e-10!12;UBERON:0007277!7.06e-10!12;UBERON:0002619!8.12e-09!22;UBERON:0002680!5.83e-08!9;UBERON:0001895!5.83e-08!9;UBERON:0010092!5.83e-08!9;UBERON:0001950!8.01e-08!20|ontology_enrichment_uberon_v019=UBERON:0001016;1.44e-10;83!UBERON:0004732;4.33e-10;13!UBERON:0000955;1.36e-09;68!UBERON:0004733;1.70e-09;12!UBERON:0002028;1.70e-09;12!UBERON:0000073;2.04e-09;53!UBERON:0002616;2.04e-09;53!UBERON:0001017;7.12e-09;75!UBERON:0002037;2.36e-08;6!UBERON:0000956;2.47e-08;25!UBERON:0000203;2.47e-08;25!UBERON:0002619;1.80e-07;22!UBERON:0001950;3.43e-07;20!UBERON:0002680;5.02e-07;9!UBERON:0001895;5.02e-07;9!UBERON:0001893;8.44e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.22e-31,89;UBERON:0001017,3.77e-30,81;UBERON:0000955,2.22e-22,68;UBERON:0006238,2.22e-22,68;UBERON:0004121,1.89e-20,171;UBERON:0000924,1.89e-20,171;UBERON:0006601,1.89e-20,171;UBERON:0002346,2.16e-17,86;UBERON:0000073,5.54e-15,53;UBERON:0002616,5.54e-15,53;UBERON:0001049,1.04e-14,56;UBERON:0005068,1.04e-14,56;UBERON:0006241,1.04e-14,56;UBERON:0007135,1.04e-14,56;UBERON:0003075,1.59e-14,82;UBERON:0007284,1.59e-14,82;UBERON:0011216,6.15e-13,223;UBERON:0010371,1.02e-10,104;UBERON:0003056,1.84e-10,61;UBERON:0004732,3.73e-10,13;UBERON:0004733,1.34e-09,12;UBERON:0002028,1.34e-09,12;UBERON:0007277,1.34e-09,12;UBERON:0003076,1.49e-08,15;UBERON:0003057,1.49e-08,15;UBERON:0000956,1.99e-08,25;UBERON:0000203,1.99e-08,25;UBERON:0002037,2.04e-08,6;UBERON:0006215,2.04e-08,6;UBERON:0002780,2.35e-08,41;UBERON:0001890,2.35e-08,41;UBERON:0003080,2.35e-08,41;UBERON:0006240,2.35e-08,41;UBERON:0001893,1.31e-07,34;UBERON:0002619,1.45e-07,22;UBERON:0001950,2.65e-07,20;UBERON:0001869,2.75e-07,32;UBERON:0010314,3.18e-07,132;UBERON:0002680,4.38e-07,9;UBERON:0001895,4.38e-07,9;UBERON:0010092,4.38e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,1.72369481307503,3.26401105990805,6.58254915103984,2.57612388417951,0.684372125364421,2.25976751270645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83604451492204,1.10864698731282,2.63504357079378,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,3.93529311876822,5.76175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.53815942907168,10.7349112340403,6.50686080069303,8.18922334621426,7.31730467539322,4.74470566798579,0,0,0,0,0,2.36613600079688,1.34867752062481,1.92808823906786,1.7647035637183,2.39667388501647,2.37270619111097,1.61797569792197,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,7.41954591840492,3.52226082707465,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12873 | |||
|TSSclassifier=S | |||
|UniProt=O95409 | |||
|association_with_transcript=104bp_to_ENST00000376335,NM_007129_5end | |||
|coexpression_cluster_id=C1375 | |||
|description=CAGE_peak_3_at_ZIC2_5end | |||
|id=chr13:100634130..100634143,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.35e-10!25;CL:0000133!3.21e-07!59;CL:0000047!5.84e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;9.55e-13;25!CL:0002322;7.41e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.44e-13,25;CL:0000133,8.99e-10,59;CL:0000047,9.80e-09,8;CL:0002322,7.47e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.30e-07;10!UBERON:0006601;3.77e-07;82 | |||
|ontology_enrichment_disease=DOID:162!1.67e-31!235;DOID:0050687!4.65e-31!143;DOID:14566!6.95e-30!239;DOID:305!5.96e-23!106;DOID:299!1.89e-10!25;DOID:0050686!3.03e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:299;1.07e-08;25!DOID:0050687;9.25e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.05e-22,143;DOID:162,2.20e-19,235;DOID:14566,2.04e-18,239;DOID:305,9.26e-15,106;DOID:299,1.70e-08,25;DOID:0050686,4.33e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.87e-34!82;UBERON:0005743!2.57e-33!86;UBERON:0000073!4.37e-33!94;UBERON:0001016!4.37e-33!94;UBERON:0000955!6.93e-26!69;UBERON:0006238!6.93e-26!69;UBERON:0002346!7.64e-24!90;UBERON:0001049!1.74e-21!57;UBERON:0005068!1.74e-21!57;UBERON:0006241!1.74e-21!57;UBERON:0007135!1.74e-21!57;UBERON:0002616!3.06e-21!59;UBERON:0003075!3.97e-21!86;UBERON:0007284!3.97e-21!86;UBERON:0000924!1.47e-20!173;UBERON:0006601!1.47e-20!173;UBERON:0004121!2.18e-18!169;UBERON:0000033!5.14e-16!123;UBERON:0000153!3.24e-14!129;UBERON:0007811!3.24e-14!129;UBERON:0002780!2.63e-13!41;UBERON:0001890!2.63e-13!41;UBERON:0006240!2.63e-13!41;UBERON:0003056!3.72e-13!61;UBERON:0003080!9.88e-13!42;UBERON:0001893!1.01e-11!34;UBERON:0002791!2.89e-11!33;UBERON:0002020!3.39e-11!34;UBERON:0003528!3.39e-11!34;UBERON:0003076!8.16e-11!15;UBERON:0003057!8.16e-11!15;UBERON:0001869!1.02e-10!32;UBERON:0000956!2.63e-10!25;UBERON:0000203!2.63e-10!25;UBERON:0004732!2.87e-10!13;UBERON:0004733!7.06e-10!12;UBERON:0002028!7.06e-10!12;UBERON:0007277!7.06e-10!12;UBERON:0002619!8.12e-09!22;UBERON:0002680!5.83e-08!9;UBERON:0001895!5.83e-08!9;UBERON:0010092!5.83e-08!9;UBERON:0001950!8.01e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001016;1.44e-10;83!UBERON:0004732;4.33e-10;13!UBERON:0000955;1.36e-09;68!UBERON:0004733;1.70e-09;12!UBERON:0002028;1.70e-09;12!UBERON:0000073;2.04e-09;53!UBERON:0002616;2.04e-09;53!UBERON:0001017;7.12e-09;75!UBERON:0002037;2.36e-08;6!UBERON:0000956;2.47e-08;25!UBERON:0000203;2.47e-08;25!UBERON:0002619;1.80e-07;22!UBERON:0001950;3.43e-07;20!UBERON:0002680;5.02e-07;9!UBERON:0001895;5.02e-07;9!UBERON:0001893;8.44e-07;34 | |||
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| |||
|short_description=p3@ZIC2 | |||
}} |
Revision as of 01:17, 11 September 2013
Short description: | p3@ZIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ZIC2_5end |
Coexpression cluster: | C1375_cerebellum_Pericytes_extraskeletal_neuroblastoma_teratocarcinoma_neuroectodermal_H9 |
Association with transcript: | 104bp_to_ENST00000376335, NM_007129_5end |
EntrezGene: | ZIC2 |
HGNC: | 12873 |
UniProt: | O95409 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.44e-13 | 25 |
neurectodermal cell | 8.99e-10 | 59 |
neuronal stem cell | 9.80e-09 | 8 |
embryonic stem cell | 7.47e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.05e-22 | 143 |
cancer | 2.20e-19 | 235 |
disease of cellular proliferation | 2.04e-18 | 239 |
carcinoma | 9.26e-15 | 106 |
adenocarcinoma | 1.70e-08 | 25 |
organ system cancer | 4.33e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.