FFCP PHASE1:Hg19::chr16:57673437..57673438,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9289|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4512|TSSclassifier=S|UniProt=F5H144|association_with_transcript=100bp_to_ENST00000544297_5end|description=CAGE_peak_19_at_GPR56_5end|id=chr16:57673437..57673438,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;1.56e-12;2|ontology_enrichment_celltype_v019_2=CL:0000047,4.94e-12,8|ontology_enrichment_development_v019=UBERON:0006241;1.21e-08;3!UBERON:0003057;1.21e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.49e-83!57;UBERON:0005068!1.49e-83!57;UBERON:0006241!1.49e-83!57;UBERON:0007135!1.49e-83!57;UBERON:0001017!2.80e-80!82;UBERON:0005743!2.69e-76!86;UBERON:0001893!2.06e-74!34;UBERON:0002020!3.39e-74!34;UBERON:0003528!3.39e-74!34;UBERON:0001869!1.05e-72!32;UBERON:0002780!5.56e-72!41;UBERON:0001890!5.56e-72!41;UBERON:0006240!5.56e-72!41;UBERON:0002619!8.95e-72!22;UBERON:0002791!2.45e-70!33;UBERON:0002616!2.63e-70!59;UBERON:0003080!3.60e-70!42;UBERON:0000073!1.55e-68!94;UBERON:0001016!1.55e-68!94;UBERON:0000955!6.66e-67!69;UBERON:0006238!6.66e-67!69;UBERON:0000956!5.53e-63!25;UBERON:0000203!5.53e-63!25;UBERON:0001950!1.36e-62!20;UBERON:0003075!6.94e-57!86;UBERON:0007284!6.94e-57!86;UBERON:0002346!4.49e-54!90;UBERON:0003056!7.46e-47!61;UBERON:0004121!2.13e-35!169;UBERON:0000033!5.43e-35!123;UBERON:0000924!2.02e-34!173;UBERON:0006601!2.02e-34!173;UBERON:0007023!1.94e-33!115;UBERON:0000153!4.56e-33!129;UBERON:0007811!4.56e-33!129;UBERON:0002021!1.91e-24!5;UBERON:0001871!5.16e-21!7;UBERON:0000025!6.18e-20!194;UBERON:0000200!7.14e-20!6;UBERON:0000349!2.12e-16!5;UBERON:0001872!5.40e-16!5;UBERON:0002771!7.60e-15!3;UBERON:0004111!1.08e-14!241;UBERON:0003076!1.18e-14!15;UBERON:0003057!1.18e-14!15;UBERON:0002298!2.13e-14!8;UBERON:0000988!3.14e-14!3;UBERON:0002308!3.02e-13!9;UBERON:0000125!3.02e-13!9;UBERON:0000369!6.86e-12!4;UBERON:0002435!6.86e-12!4;UBERON:0000204!6.86e-12!4;UBERON:0010082!6.86e-12!4;UBERON:0000477!2.78e-11!286;UBERON:0001954!3.87e-11!2;UBERON:0003022!3.87e-11!2;UBERON:0002421!3.87e-11!2;UBERON:0002600!3.87e-11!2;UBERON:0000064!5.89e-11!219;UBERON:0000483!8.22e-11!309;UBERON:0000119!1.22e-10!312;UBERON:0002148!4.37e-10!2;UBERON:0009662!4.37e-10!2;UBERON:0004733!1.59e-09!12;UBERON:0002028!1.59e-09!12;UBERON:0007277!1.59e-09!12;UBERON:0002420!4.15e-09!9;UBERON:0007245!4.15e-09!9;UBERON:0010009!4.15e-09!9;UBERON:0010011!4.15e-09!9;UBERON:0000454!4.15e-09!9;UBERON:0000475!7.59e-09!365;UBERON:0004732!8.95e-09!13;UBERON:0005383!1.22e-07!3;UBERON:0005382!1.22e-07!3;UBERON:0002240!1.26e-07!3;UBERON:0001896!2.19e-07!3;UBERON:0005290!2.19e-07!3;UBERON:0010096!2.19e-07!3;UBERON:0006331!5.31e-07!3;UBERON:0009663!5.69e-07!7|ontology_enrichment_uberon_v019=UBERON:0002902;3.28e-23;1!UBERON:0009899;3.28e-23;1!UBERON:0002021;1.62e-18;5!UBERON:0001954;2.59e-12;2!UBERON:0003022;2.59e-12;2!UBERON:0002421;2.59e-12;2!UBERON:0002600;2.59e-12;2!UBERON:0002619;2.94e-09;22!UBERON:0001017;4.08e-09;75!UBERON:0002114;8.63e-09;2!UBERON:0001896;1.21e-08;3!UBERON:0002240;1.21e-08;3!UBERON:0005174;1.21e-08;3!UBERON:0005290;1.21e-08;3!UBERON:0001137;1.21e-08;3!UBERON:0000956;2.93e-08;25!UBERON:0000203;2.93e-08;25!UBERON:0001016;2.17e-07;83|ontology_enrichment_uberon_v019_2=UBERON:0002902,6.40e-23,1;UBERON:0009899,6.40e-23,1;UBERON:0002021,2.11e-18,5;UBERON:0001017,9.49e-17,81;UBERON:0001016,4.27e-15,89;UBERON:0001954,2.32e-12,2;UBERON:0003022,2.32e-12,2;UBERON:0002421,2.32e-12,2;UBERON:0002600,2.32e-12,2;UBERON:0001049,8.58e-10,56;UBERON:0005068,8.58e-10,56;UBERON:0006241,8.58e-10,56;UBERON:0007135,8.58e-10,56;UBERON:0002619,3.12e-09,22;UBERON:0002114,8.31e-09,2;UBERON:0002240,1.04e-08,3;UBERON:0005174,1.04e-08,3;UBERON:0001137,1.04e-08,3;UBERON:0001896,1.40e-08,3;UBERON:0005290,1.40e-08,3;UBERON:0010096,1.40e-08,3;UBERON:0000956,3.08e-08,25;UBERON:0000203,3.08e-08,25;UBERON:0000955,5.28e-08,68;UBERON:0006238,5.28e-08,68;UBERON:0004121,7.35e-08,171;UBERON:0000924,7.35e-08,171;UBERON:0006601,7.35e-08,171;UBERON:0011216,1.33e-07,223;UBERON:0000073,7.39e-07,53;UBERON:0002616,7.39e-07,53;UBERON:0003076,8.33e-07,15;UBERON:0003057,8.33e-07,15;UBERON:0003075,9.31e-07,82;UBERON:0007284,9.31e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04913549066956,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9289 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4512 | |||
|TSSclassifier=S | |||
|UniProt=F5H144 | |||
|association_with_transcript=100bp_to_ENST00000544297_5end | |||
|description=CAGE_peak_19_at_GPR56_5end | |||
|id=chr16:57673437..57673438,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.56e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.94e-12,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.21e-08;3!UBERON:0003057;1.21e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-83!57;UBERON:0005068!1.49e-83!57;UBERON:0006241!1.49e-83!57;UBERON:0007135!1.49e-83!57;UBERON:0001017!2.80e-80!82;UBERON:0005743!2.69e-76!86;UBERON:0001893!2.06e-74!34;UBERON:0002020!3.39e-74!34;UBERON:0003528!3.39e-74!34;UBERON:0001869!1.05e-72!32;UBERON:0002780!5.56e-72!41;UBERON:0001890!5.56e-72!41;UBERON:0006240!5.56e-72!41;UBERON:0002619!8.95e-72!22;UBERON:0002791!2.45e-70!33;UBERON:0002616!2.63e-70!59;UBERON:0003080!3.60e-70!42;UBERON:0000073!1.55e-68!94;UBERON:0001016!1.55e-68!94;UBERON:0000955!6.66e-67!69;UBERON:0006238!6.66e-67!69;UBERON:0000956!5.53e-63!25;UBERON:0000203!5.53e-63!25;UBERON:0001950!1.36e-62!20;UBERON:0003075!6.94e-57!86;UBERON:0007284!6.94e-57!86;UBERON:0002346!4.49e-54!90;UBERON:0003056!7.46e-47!61;UBERON:0004121!2.13e-35!169;UBERON:0000033!5.43e-35!123;UBERON:0000924!2.02e-34!173;UBERON:0006601!2.02e-34!173;UBERON:0007023!1.94e-33!115;UBERON:0000153!4.56e-33!129;UBERON:0007811!4.56e-33!129;UBERON:0002021!1.91e-24!5;UBERON:0001871!5.16e-21!7;UBERON:0000025!6.18e-20!194;UBERON:0000200!7.14e-20!6;UBERON:0000349!2.12e-16!5;UBERON:0001872!5.40e-16!5;UBERON:0002771!7.60e-15!3;UBERON:0004111!1.08e-14!241;UBERON:0003076!1.18e-14!15;UBERON:0003057!1.18e-14!15;UBERON:0002298!2.13e-14!8;UBERON:0000988!3.14e-14!3;UBERON:0002308!3.02e-13!9;UBERON:0000125!3.02e-13!9;UBERON:0000369!6.86e-12!4;UBERON:0002435!6.86e-12!4;UBERON:0000204!6.86e-12!4;UBERON:0010082!6.86e-12!4;UBERON:0000477!2.78e-11!286;UBERON:0001954!3.87e-11!2;UBERON:0003022!3.87e-11!2;UBERON:0002421!3.87e-11!2;UBERON:0002600!3.87e-11!2;UBERON:0000064!5.89e-11!219;UBERON:0000483!8.22e-11!309;UBERON:0000119!1.22e-10!312;UBERON:0002148!4.37e-10!2;UBERON:0009662!4.37e-10!2;UBERON:0004733!1.59e-09!12;UBERON:0002028!1.59e-09!12;UBERON:0007277!1.59e-09!12;UBERON:0002420!4.15e-09!9;UBERON:0007245!4.15e-09!9;UBERON:0010009!4.15e-09!9;UBERON:0010011!4.15e-09!9;UBERON:0000454!4.15e-09!9;UBERON:0000475!7.59e-09!365;UBERON:0004732!8.95e-09!13;UBERON:0005383!1.22e-07!3;UBERON:0005382!1.22e-07!3;UBERON:0002240!1.26e-07!3;UBERON:0001896!2.19e-07!3;UBERON:0005290!2.19e-07!3;UBERON:0010096!2.19e-07!3;UBERON:0006331!5.31e-07!3;UBERON:0009663!5.69e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;3.28e-23;1!UBERON:0009899;3.28e-23;1!UBERON:0002021;1.62e-18;5!UBERON:0001954;2.59e-12;2!UBERON:0003022;2.59e-12;2!UBERON:0002421;2.59e-12;2!UBERON:0002600;2.59e-12;2!UBERON:0002619;2.94e-09;22!UBERON:0001017;4.08e-09;75!UBERON:0002114;8.63e-09;2!UBERON:0001896;1.21e-08;3!UBERON:0002240;1.21e-08;3!UBERON:0005174;1.21e-08;3!UBERON:0005290;1.21e-08;3!UBERON:0001137;1.21e-08;3!UBERON:0000956;2.93e-08;25!UBERON:0000203;2.93e-08;25!UBERON:0001016;2.17e-07;83 | |||
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|short_description=p19@GPR56 | |||
}} |
Revision as of 10:55, 11 September 2013
Short description: | p19@GPR56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_GPR56_5end |
Coexpression cluster: | NA |
Association with transcript: | 100bp_to_ENST00000544297_5end |
EntrezGene: | GPR56 |
HGNC: | 4512 |
UniProt: | F5H144 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.94e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
occipital pole | 6.40e-23 | 1 |
pole of cerebral hemisphere | 6.40e-23 | 1 |
occipital lobe | 2.11e-18 | 5 |
central nervous system | 9.49e-17 | 81 |
nervous system | 4.27e-15 | 89 |
Ammon's horn | 2.32e-12 | 2 |
lobe parts of cerebral cortex | 2.32e-12 | 2 |
hippocampal formation | 2.32e-12 | 2 |
limbic lobe | 2.32e-12 | 2 |
neural tube | 8.58e-10 | 56 |
neural rod | 8.58e-10 | 56 |
future spinal cord | 8.58e-10 | 56 |
neural keel | 8.58e-10 | 56 |
regional part of cerebral cortex | 3.12e-09 | 22 |
duodenum | 8.31e-09 | 2 |
spinal cord | 1.04e-08 | 3 |
dorsal region element | 1.04e-08 | 3 |
dorsum | 1.04e-08 | 3 |
medulla oblongata | 1.40e-08 | 3 |
myelencephalon | 1.40e-08 | 3 |
future myelencephalon | 1.40e-08 | 3 |
cerebral cortex | 3.08e-08 | 25 |
pallium | 3.08e-08 | 25 |
brain | 5.28e-08 | 68 |
future brain | 5.28e-08 | 68 |
ectoderm-derived structure | 7.35e-08 | 171 |
ectoderm | 7.35e-08 | 171 |
presumptive ectoderm | 7.35e-08 | 171 |
organ system subdivision | 1.33e-07 | 223 |
regional part of nervous system | 7.39e-07 | 53 |
regional part of brain | 7.39e-07 | 53 |
posterior neural tube | 8.33e-07 | 15 |
chordal neural plate | 8.33e-07 | 15 |
neural plate | 9.31e-07 | 82 |
presumptive neural plate | 9.31e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.