FFCP PHASE1:Hg19::chr1:14075903..14075940,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7799 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9347 | |||
|TSSclassifier=S | |||
|UniProt=Q5THJ1,D6RJM6,D6RED5 | |||
|association_with_transcript=0bp_to_ENST00000343137,ENST00000407521,ENST00000491815,ENST00000503842,ENST00000505823_5end | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_PRDM2_5end | |||
|id=chr1:14075903..14075940,+ | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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2611104 | |||
|short_description=p1@PRDM2 | |||
}} |
Revision as of 23:59, 11 September 2013
Short description: | p1@PRDM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PRDM2_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000343137, ENST00000407521, ENST00000491815, ENST00000503842, ENST00000505823_5end |
EntrezGene: | PRDM2 |
HGNC: | 9347 |
UniProt: | Q5THJ1D6RJM6D6RED5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.34e-32 | 114 |
hematopoietic system | 3.15e-20 | 98 |
blood island | 3.15e-20 | 98 |
neural tube | 5.69e-19 | 56 |
neural rod | 5.69e-19 | 56 |
future spinal cord | 5.69e-19 | 56 |
neural keel | 5.69e-19 | 56 |
regional part of nervous system | 1.23e-17 | 53 |
regional part of brain | 1.23e-17 | 53 |
hemolymphoid system | 2.01e-17 | 108 |
regional part of forebrain | 4.19e-17 | 41 |
forebrain | 4.19e-17 | 41 |
anterior neural tube | 4.19e-17 | 41 |
future forebrain | 4.19e-17 | 41 |
bone marrow | 1.43e-15 | 76 |
bone element | 3.50e-15 | 82 |
central nervous system | 5.39e-15 | 81 |
immune system | 2.74e-14 | 93 |
brain | 4.17e-14 | 68 |
future brain | 4.17e-14 | 68 |
telencephalon | 4.88e-14 | 34 |
brain grey matter | 5.46e-14 | 34 |
gray matter | 5.46e-14 | 34 |
cerebral hemisphere | 2.83e-13 | 32 |
regional part of telencephalon | 3.25e-13 | 32 |
nervous system | 4.22e-13 | 89 |
regional part of cerebral cortex | 3.33e-12 | 22 |
skeletal element | 6.14e-12 | 90 |
neocortex | 2.51e-11 | 20 |
cerebral cortex | 4.62e-10 | 25 |
pallium | 4.62e-10 | 25 |
skeletal system | 5.23e-10 | 100 |
neural plate | 1.66e-08 | 82 |
presumptive neural plate | 1.66e-08 | 82 |
neurectoderm | 2.28e-08 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.