FFCP PHASE1:Hg19::chr2:188312865..188312876,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10203|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16709|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000479784_5end|coexpression_cluster_id=C2678|description=CAGE_peak_3_at_CALCRL_5end|id=chr2:188312865..188312876,-|ontology_enrichment_celltype=CL:0002139!1.03e-21!24;CL:0000115!5.81e-21!35;CL:0000071!2.74e-16!18;CL:0002546!2.74e-16!18;CL:0002078!5.57e-14!44;CL:1000413!2.11e-08!9;CL:0000213!3.60e-08!57;CL:0000215!3.60e-08!57;CL:0005020!5.46e-07!6;CL:0002138!5.46e-07!6;CL:0005022!5.46e-07!6|ontology_enrichment_celltype_v019=CL:0002139;4.75e-37;24!CL:0000115;7.50e-30;36!CL:0000071;3.30e-27;18!CL:0002078;3.17e-17;45!CL:1000413;2.79e-13;9!CL:0000213;9.03e-12;58!CL:0000215;9.03e-12;58!CL:0002138;2.21e-11;6!CL:0002543;1.38e-10;6!CL:0002544;2.41e-09;6|ontology_enrichment_celltype_v019_2=CL:0002139,1.48e-37,24;CL:0000115,3.54e-36,36;CL:0000071,7.78e-28,18;CL:0002546,7.78e-28,18;CL:0002078,6.75e-27,45;CL:0000213,1.12e-18,58;CL:0000215,1.12e-18,58;CL:1000413,9.39e-14,9;CL:0005020,3.03e-11,6;CL:0002138,3.03e-11,6;CL:0005022,3.03e-11,6;CL:0002543,1.03e-10,6;CL:0002544,7.68e-10,6|ontology_enrichment_development_v019=CL:0002546;3.30e-27;18!CL:0005022;2.21e-11;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.13e-37!115;UBERON:0004111!2.72e-19!241;UBERON:0001049!1.45e-18!57;UBERON:0005068!1.45e-18!57;UBERON:0006241!1.45e-18!57;UBERON:0007135!1.45e-18!57;UBERON:0000025!1.47e-18!194;UBERON:0000477!5.49e-17!286;UBERON:0002616!1.64e-16!59;UBERON:0001986!2.74e-16!18;UBERON:0004638!2.74e-16!18;UBERON:0004852!2.74e-16!18;UBERON:0001017!7.39e-16!82;UBERON:0005743!4.40e-15!86;UBERON:0000955!1.89e-14!69;UBERON:0006238!1.89e-14!69;UBERON:0002346!2.08e-14!90;UBERON:0002020!8.29e-14!34;UBERON:0003528!8.29e-14!34;UBERON:0001893!1.64e-13!34;UBERON:0003075!3.05e-13!86;UBERON:0007284!3.05e-13!86;UBERON:0002791!4.51e-13!33;UBERON:0003080!5.99e-13!42;UBERON:0001869!1.30e-12!32;UBERON:0002780!1.59e-12!41;UBERON:0001890!1.59e-12!41;UBERON:0006240!1.59e-12!41;UBERON:0000073!1.93e-12!94;UBERON:0001016!1.93e-12!94;UBERON:0000487!6.58e-12!22;UBERON:0000119!2.61e-10!312;UBERON:0000483!3.77e-10!309;UBERON:0000468!6.93e-10!659;UBERON:0006914!1.32e-09!25;UBERON:0001950!3.06e-09!20;UBERON:0002619!3.52e-09!22;UBERON:0000956!6.14e-09!25;UBERON:0000203!6.14e-09!25;UBERON:0000055!6.31e-09!69;UBERON:0000467!6.39e-09!625;UBERON:0002049!7.60e-09!79;UBERON:0007798!7.60e-09!79;UBERON:0000480!8.21e-09!626;UBERON:0001009!1.35e-08!113;UBERON:0003915!2.11e-08!9;UBERON:0004700!2.11e-08!9;UBERON:0001917!2.11e-08!9;UBERON:0000153!4.74e-08!129;UBERON:0007811!4.74e-08!129;UBERON:0004872!7.99e-08!84;UBERON:0000922!9.54e-08!612;UBERON:0004535!1.01e-07!110;UBERON:0002050!1.15e-07!605;UBERON:0005423!1.15e-07!605;UBERON:0000923!2.41e-07!604;UBERON:0005291!2.41e-07!604;UBERON:0006598!2.41e-07!604;UBERON:0002532!2.41e-07!604;UBERON:0000033!2.91e-07!123;UBERON:0003056!2.99e-07!61;UBERON:0003076!5.46e-07!15;UBERON:0003057!5.46e-07!15;UBERON:0002298!9.40e-07!8|ontology_enrichment_uberon_v019=UBERON:0004638;3.30e-27;18!UBERON:0001986;3.30e-27;18!UBERON:0004852;3.30e-27;18!UBERON:0000487;3.31e-21;22!UBERON:0006914;5.54e-18;25!UBERON:0003915;2.79e-13;9!UBERON:0004700;2.79e-13;9!UBERON:0001917;2.79e-13;9!UBERON:0000490;2.41e-11;33!UBERON:0003528;4.21e-11;34!UBERON:0002020;4.21e-11;34!UBERON:0001869;2.49e-10;32!UBERON:0002791;2.72e-10;32!UBERON:0001893;4.92e-10;34!UBERON:0002298;1.57e-09;6!UBERON:0002619;4.35e-09;22!UBERON:0001950;9.16e-09;20!UBERON:0002465;1.44e-08;10!UBERON:0001473;2.99e-08;8!UBERON:0004536;2.99e-08;8!UBERON:0006558;2.99e-08;8!UBERON:0000055;6.62e-08;65!UBERON:0002780;9.13e-08;41!UBERON:0001890;9.13e-08;41!UBERON:0000956;1.14e-07;25!UBERON:0000203;1.14e-07;25!UBERON:0000073;1.49e-07;53!UBERON:0002616;1.49e-07;53!UBERON:0000125;2.79e-07;9!UBERON:0002308;2.79e-07;9!UBERON:0001017;7.77e-07;75!UBERON:0007023;9.04e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.78e-28,18;UBERON:0001986,7.78e-28,18;UBERON:0004852,7.78e-28,18;UBERON:0007023,1.15e-27,114;UBERON:0004111,4.16e-22,240;UBERON:0000025,5.81e-22,192;UBERON:0000487,1.05e-21,22;UBERON:0006914,2.06e-18,25;UBERON:0001049,6.24e-16,56;UBERON:0005068,6.24e-16,56;UBERON:0006241,6.24e-16,56;UBERON:0007135,6.24e-16,56;UBERON:0000055,2.17e-14,68;UBERON:0003915,9.39e-14,9;UBERON:0004700,9.39e-14,9;UBERON:0001917,9.39e-14,9;UBERON:0002049,2.85e-13,78;UBERON:0007798,2.85e-13,78;UBERON:0003528,5.55e-13,34;UBERON:0002020,5.55e-13,34;UBERON:0001017,6.83e-13,81;UBERON:0000073,8.27e-13,53;UBERON:0002616,8.27e-13,53;UBERON:0002346,1.14e-12,86;UBERON:0001893,1.99e-11,34;UBERON:0002791,3.87e-11,32;UBERON:0001869,3.87e-11,32;UBERON:0010314,4.01e-11,132;UBERON:0001009,4.08e-11,112;UBERON:0004535,6.99e-11,109;UBERON:0003075,7.26e-11,82;UBERON:0007284,7.26e-11,82;UBERON:0000955,7.89e-11,68;UBERON:0006238,7.89e-11,68;UBERON:0001016,1.01e-10,89;UBERON:0007500,6.14e-10,59;UBERON:0001981,6.14e-10,59;UBERON:0004537,6.14e-10,59;UBERON:0006965,6.14e-10,59;UBERON:0000483,6.49e-10,306;UBERON:0002780,7.19e-10,41;UBERON:0001890,7.19e-10,41;UBERON:0003080,7.19e-10,41;UBERON:0006240,7.19e-10,41;UBERON:0000119,1.21e-09,309;UBERON:0002298,1.48e-09,6;UBERON:0002619,2.95e-09,22;UBERON:0004872,4.28e-09,83;UBERON:0001950,7.75e-09,20;UBERON:0002465,1.75e-08,10;UBERON:0003914,2.40e-08,117;UBERON:0001473,3.76e-08,8;UBERON:0004536,3.76e-08,8;UBERON:0006558,3.76e-08,8;UBERON:0003076,7.76e-08,15;UBERON:0003057,7.76e-08,15;UBERON:0000956,8.20e-08,25;UBERON:0000203,8.20e-08,25;UBERON:0010371,1.64e-07,104;UBERON:0000125,2.72e-07,9;UBERON:0002308,2.72e-07,9;UBERON:0001638,8.65e-07,9;UBERON:0003920,8.65e-07,9;UBERON:0004582,8.65e-07,9|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0.369363174230364,0,0,0.286235987131057,0.136874425072884,0,0.534893840235659,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0.689491361473237,0,0,0.188242339542605,0,0,0.612167784741805,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0,0.632924774881769,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,1.30979075497713,0,0,0.97364218096405,0.348259474598534,0.398873881556595,0,0,0,5.16782259153433,1.72046919021225,2.77712401286075,1.69592382577203,2.09749718104953,3.30141650328081,1.46296476575767,3.10100111003195,4.62496141492723,2.00832367658802,7.65375702507379,4.56163263431108,6.83373761134875,3.67663080345869,1.62028389576352,10.3587684809533,5.38870494302808,4.39184773884957,3.06633274931766,1.89853131913626,2.19842092716489,0,0,0,0,0.506522046658319,0,1.14734648299525,0,0.560677600142307,0,0,0,0.942974704487816,4.41347138406339,1.36221684880438,1.15235184896,0,0,0.570471821544449,0.149448680551801,1.05691048779388,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0,0,11.5493158208859,7.40776820122577,11.0347408296067,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,1.47798971368783,0.176096868026452,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,2.60279707715243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,2.38131187387122,2.59099099322567,1.54227252690289,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0.322260734604821,0,0.170453254832202,0.178064071293475,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,4.9812780952444,1.45632626099416,0,0,0,0,0,0,1.82870241333667,0.111308705022906,0,0,2.39097585901284,1.10513566212459,0,0,0.123084805461069,0,0,0,0,1.87422470710174,0,0,0,1.39152147242777,0,0,0,0.724999575434793,0,0,0,0,3.2076507472158,0,2.65722415744152,1.08536794762867,0,0.663475559587348,0.886642856860642,0.87754158861589,0,0,3.61666214967846,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0345239835768,3.05515072466813,0,0,0,1.07841812769083,0.802577647298789,2.34264445725339,0,0,0,0.789168805698781,1.20990716048664,0,8.71974798873134,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0.873633341210151,0,0,0,0,1.16386819786103,0.0882561266915003,0.677942222341597,0,0,2.15256706249988,0,0,1.28071796843612,0,0,0.458146384663663,0.171594997861965,0,0.124252535565433,0,0.271808412147228,0.313808538937,0.407992870545287,0,1.80126086612937,0.410716136675979,0,0,0.262887354279314,3.6306712165393,1.14580212005842,0,0.599037001496973,0.429226048136571,2.00854311697685,2.14987111957524,0,0,0,0,0,0,0,0,1.90684768556206,0,0.275078873194468,0,0.449947783103001,0,1.15424157650247,0,1.02447419488958,0.577000469484979,0,0.35857467866569,0,4.2881719582402,2.64836788146173,0,0,0,0,0,0.82092520749339,0,0,0.879313402068495,1.32506888912221,2.19781025814636,1.3223260174269,0,0,6.94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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10203 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16709 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000479784_5end | |||
|coexpression_cluster_id=C2678 | |||
|description=CAGE_peak_3_at_CALCRL_5end | |||
|id=chr2:188312865..188312876,- | |||
|ontology_enrichment_celltype=CL:0002139!1.03e-21!24;CL:0000115!5.81e-21!35;CL:0000071!2.74e-16!18;CL:0002546!2.74e-16!18;CL:0002078!5.57e-14!44;CL:1000413!2.11e-08!9;CL:0000213!3.60e-08!57;CL:0000215!3.60e-08!57;CL:0005020!5.46e-07!6;CL:0002138!5.46e-07!6;CL:0005022!5.46e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.75e-37;24!CL:0000115;7.50e-30;36!CL:0000071;3.30e-27;18!CL:0002078;3.17e-17;45!CL:1000413;2.79e-13;9!CL:0000213;9.03e-12;58!CL:0000215;9.03e-12;58!CL:0002138;2.21e-11;6!CL:0002543;1.38e-10;6!CL:0002544;2.41e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.48e-37,24;CL:0000115,3.54e-36,36;CL:0000071,7.78e-28,18;CL:0002546,7.78e-28,18;CL:0002078,6.75e-27,45;CL:0000213,1.12e-18,58;CL:0000215,1.12e-18,58;CL:1000413,9.39e-14,9;CL:0005020,3.03e-11,6;CL:0002138,3.03e-11,6;CL:0005022,3.03e-11,6;CL:0002543,1.03e-10,6;CL:0002544,7.68e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.30e-27;18!CL:0005022;2.21e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@CALCRL | |||
}} |
Revision as of 15:35, 12 September 2013
Short description: | p3@CALCRL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CALCRL_5end |
Coexpression cluster: | C2678_lung_Endothelial_Lymphatic_mature_migratory_adipose_Mast |
Association with transcript: | 0bp_to_ENST00000479784_5end |
EntrezGene: | CALCRL |
HGNC: | 16709 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.48e-37 | 24 |
endothelial cell | 3.54e-36 | 36 |
blood vessel endothelial cell | 7.78e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.78e-28 | 18 |
meso-epithelial cell | 6.75e-27 | 45 |
lining cell | 1.12e-18 | 58 |
barrier cell | 1.12e-18 | 58 |
endothelial cell of artery | 9.39e-14 | 9 |
lymphangioblast | 3.03e-11 | 6 |
endothelial cell of lymphatic vessel | 3.03e-11 | 6 |
vascular lymphangioblast | 3.03e-11 | 6 |
vein endothelial cell | 1.03e-10 | 6 |
aortic endothelial cell | 7.68e-10 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.