FFCP PHASE1:Hg19::chr4:154143744..154143753,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C24|description=CAGE_peak_at_chr4:154143744..154143753,+|id=chr4:154143744..154143753,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0002559;6.78e-08;5|ontology_enrichment_celltype_v019_2=CL:0000346,2.89e-12,3;CL:1000428,2.89e-12,3;CL:0002559,7.01e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.16e-57!94;UBERON:0001016!1.16e-57!94;UBERON:0002780!6.87e-56!41;UBERON:0001890!6.87e-56!41;UBERON:0006240!6.87e-56!41;UBERON:0005743!7.49e-56!86;UBERON:0001049!1.65e-55!57;UBERON:0005068!1.65e-55!57;UBERON:0006241!1.65e-55!57;UBERON:0007135!1.65e-55!57;UBERON:0003080!2.54e-54!42;UBERON:0001017!3.33e-54!82;UBERON:0002616!1.15e-47!59;UBERON:0000955!1.26e-47!69;UBERON:0006238!1.26e-47!69;UBERON:0002346!5.58e-46!90;UBERON:0003075!1.46e-44!86;UBERON:0007284!1.46e-44!86;UBERON:0003056!1.84e-43!61;UBERON:0001893!7.02e-42!34;UBERON:0002791!6.19e-40!33;UBERON:0002020!4.10e-38!34;UBERON:0003528!4.10e-38!34;UBERON:0001869!6.54e-38!32;UBERON:0000924!1.06e-31!173;UBERON:0006601!1.06e-31!173;UBERON:0004121!2.97e-30!169;UBERON:0007023!1.15e-28!115;UBERON:0000956!1.85e-28!25;UBERON:0000203!1.85e-28!25;UBERON:0000033!4.52e-28!123;UBERON:0002619!1.27e-26!22;UBERON:0000153!3.99e-26!129;UBERON:0007811!3.99e-26!129;UBERON:0001950!8.92e-23!20;UBERON:0000025!4.88e-16!194;UBERON:0001894!7.43e-16!7;UBERON:0006222!7.43e-16!7;UBERON:0000483!1.58e-11!309;UBERON:0002420!1.66e-11!9;UBERON:0007245!1.66e-11!9;UBERON:0010009!1.66e-11!9;UBERON:0010011!1.66e-11!9;UBERON:0000454!1.66e-11!9;UBERON:0004111!1.78e-11!241;UBERON:0000119!2.90e-11!312;UBERON:0009663!4.67e-11!7;UBERON:0002308!5.60e-11!9;UBERON:0000125!5.60e-11!9;UBERON:0003296!4.26e-10!4;UBERON:0010133!4.26e-10!4;UBERON:0000475!5.59e-10!365;UBERON:0001871!1.96e-09!7;UBERON:0000064!2.68e-09!219;UBERON:0000477!3.40e-09!286;UBERON:0000200!5.48e-09!6;UBERON:0000922!4.63e-08!612;UBERON:0000349!5.38e-08!5;UBERON:0002050!8.11e-08!605;UBERON:0005423!8.11e-08!605;UBERON:0001872!2.12e-07!5;UBERON:0000467!2.15e-07!625;UBERON:0000468!2.17e-07!659;UBERON:0000480!2.40e-07!626;UBERON:0000923!2.49e-07!604;UBERON:0005291!2.49e-07!604;UBERON:0006598!2.49e-07!604;UBERON:0002532!2.49e-07!604;UBERON:0002771!4.73e-07!3;UBERON:0002021!4.79e-07!5;UBERON:0000062!8.85e-07!511;UBERON:0000481!9.92e-07!347|ontology_enrichment_uberon_v019=UBERON:0002784;1.77e-74;4!UBERON:0001905;7.41e-67;2!UBERON:0002757;7.41e-67;2!UBERON:0010134;7.41e-67;2!UBERON:0005408;7.41e-67;2!UBERON:0001899;7.41e-67;2!UBERON:0001894;4.86e-43;7!UBERON:0003296;4.28e-34;4!UBERON:0010133;4.28e-34;4!UBERON:0002038;5.97e-34;1!UBERON:0009661;5.97e-34;1!UBERON:0002950;5.97e-34;1!UBERON:0001891;5.97e-34;1!UBERON:0001897;9.86e-18;2!UBERON:0010225;9.86e-18;2!UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0000955;3.66e-10;68!UBERON:0002780;1.85e-08;41!UBERON:0001890;1.85e-08;41!UBERON:0002073;6.78e-08;5!UBERON:0000073;4.51e-07;53!UBERON:0002616;4.51e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0002784,1.56e-74,4;UBERON:0001905,7.41e-67,2;UBERON:0002757,7.41e-67,2;UBERON:0010134,7.41e-67,2;UBERON:0005408,7.41e-67,2;UBERON:0001899,7.41e-67,2;UBERON:0001894,4.53e-43,7;UBERON:0006222,4.53e-43,7;UBERON:0003296,4.28e-34,4;UBERON:0010133,4.28e-34,4;UBERON:0002038,9.85e-34,1;UBERON:0009661,9.85e-34,1;UBERON:0002950,9.85e-34,1;UBERON:0001891,9.85e-34,1;UBERON:0009616,9.85e-34,1;UBERON:0010286,9.85e-34,1;UBERON:0001897,9.07e-18,2;UBERON:0010225,9.07e-18,2;UBERON:0002780,3.65e-13,41;UBERON:0001890,3.65e-13,41;UBERON:0003080,3.65e-13,41;UBERON:0006240,3.65e-13,41;UBERON:0000955,2.88e-12,68;UBERON:0006238,2.88e-12,68;UBERON:0000412,2.89e-12,3;UBERON:0001992,2.89e-12,3;UBERON:0001017,2.04e-10,81;UBERON:0000073,2.28e-10,53;UBERON:0002616,2.28e-10,53;UBERON:0001049,7.51e-10,56;UBERON:0005068,7.51e-10,56;UBERON:0006241,7.51e-10,56;UBERON:0007135,7.51e-10,56;UBERON:0001016,1.94e-09,89;UBERON:0003056,4.24e-09,61;UBERON:0010371,2.65e-08,104;UBERON:0002073,7.01e-08,5;UBERON:0005086,7.01e-08,5;UBERON:0007023,1.09e-07,114;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0003075,6.43e-07,82;UBERON:0007284,6.43e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0.12283431731176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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr4:154143744..154143753,+ | |||
|id=chr4:154143744..154143753,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0002559;6.78e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.89e-12,3;CL:1000428,2.89e-12,3;CL:0002559,7.01e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.16e-57!94;UBERON:0001016!1.16e-57!94;UBERON:0002780!6.87e-56!41;UBERON:0001890!6.87e-56!41;UBERON:0006240!6.87e-56!41;UBERON:0005743!7.49e-56!86;UBERON:0001049!1.65e-55!57;UBERON:0005068!1.65e-55!57;UBERON:0006241!1.65e-55!57;UBERON:0007135!1.65e-55!57;UBERON:0003080!2.54e-54!42;UBERON:0001017!3.33e-54!82;UBERON:0002616!1.15e-47!59;UBERON:0000955!1.26e-47!69;UBERON:0006238!1.26e-47!69;UBERON:0002346!5.58e-46!90;UBERON:0003075!1.46e-44!86;UBERON:0007284!1.46e-44!86;UBERON:0003056!1.84e-43!61;UBERON:0001893!7.02e-42!34;UBERON:0002791!6.19e-40!33;UBERON:0002020!4.10e-38!34;UBERON:0003528!4.10e-38!34;UBERON:0001869!6.54e-38!32;UBERON:0000924!1.06e-31!173;UBERON:0006601!1.06e-31!173;UBERON:0004121!2.97e-30!169;UBERON:0007023!1.15e-28!115;UBERON:0000956!1.85e-28!25;UBERON:0000203!1.85e-28!25;UBERON:0000033!4.52e-28!123;UBERON:0002619!1.27e-26!22;UBERON:0000153!3.99e-26!129;UBERON:0007811!3.99e-26!129;UBERON:0001950!8.92e-23!20;UBERON:0000025!4.88e-16!194;UBERON:0001894!7.43e-16!7;UBERON:0006222!7.43e-16!7;UBERON:0000483!1.58e-11!309;UBERON:0002420!1.66e-11!9;UBERON:0007245!1.66e-11!9;UBERON:0010009!1.66e-11!9;UBERON:0010011!1.66e-11!9;UBERON:0000454!1.66e-11!9;UBERON:0004111!1.78e-11!241;UBERON:0000119!2.90e-11!312;UBERON:0009663!4.67e-11!7;UBERON:0002308!5.60e-11!9;UBERON:0000125!5.60e-11!9;UBERON:0003296!4.26e-10!4;UBERON:0010133!4.26e-10!4;UBERON:0000475!5.59e-10!365;UBERON:0001871!1.96e-09!7;UBERON:0000064!2.68e-09!219;UBERON:0000477!3.40e-09!286;UBERON:0000200!5.48e-09!6;UBERON:0000922!4.63e-08!612;UBERON:0000349!5.38e-08!5;UBERON:0002050!8.11e-08!605;UBERON:0005423!8.11e-08!605;UBERON:0001872!2.12e-07!5;UBERON:0000467!2.15e-07!625;UBERON:0000468!2.17e-07!659;UBERON:0000480!2.40e-07!626;UBERON:0000923!2.49e-07!604;UBERON:0005291!2.49e-07!604;UBERON:0006598!2.49e-07!604;UBERON:0002532!2.49e-07!604;UBERON:0002771!4.73e-07!3;UBERON:0002021!4.79e-07!5;UBERON:0000062!8.85e-07!511;UBERON:0000481!9.92e-07!347 | |||
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|short_description=p@chr4:154143744..154143753,+ | |||
}} |
Revision as of 02:48, 13 September 2013
Short description: | p@chr4:154143744..154143753, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:154143744..154143753, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.89e-12 | 3 |
stem cell of epidermis | 2.89e-12 | 3 |
hair follicle cell | 7.01e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.