FFCP PHASE1:Hg19::chr4:176734246..176734258,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2823|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4460|TSSclassifier=S|UniProt=P51674,Q86YB0|association_with_transcript=-64bp_to_NM_201591,uc003iuf.2_5end|coexpression_cluster_id=C3|description=CAGE_peak_20_at_GPM6A_5end|id=chr4:176734246..176734258,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000047,2.83e-08,8|ontology_enrichment_development_v019=UBERON:0006238;1.14e-15;10!UBERON:0006601;5.53e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!5.08e-81!22;UBERON:0001017!2.38e-80!82;UBERON:0005743!2.31e-76!86;UBERON:0001893!5.77e-75!34;UBERON:0002020!1.21e-74!34;UBERON:0003528!1.21e-74!34;UBERON:0001869!2.36e-73!32;UBERON:0001950!1.04e-71!20;UBERON:0000956!3.93e-71!25;UBERON:0000203!3.93e-71!25;UBERON:0002791!9.74e-71!33;UBERON:0000073!1.35e-68!94;UBERON:0001016!1.35e-68!94;UBERON:0001049!4.48e-68!57;UBERON:0005068!4.48e-68!57;UBERON:0006241!4.48e-68!57;UBERON:0007135!4.48e-68!57;UBERON:0000955!1.74e-67!69;UBERON:0006238!1.74e-67!69;UBERON:0002780!8.87e-67!41;UBERON:0001890!8.87e-67!41;UBERON:0006240!8.87e-67!41;UBERON:0003080!4.31e-65!42;UBERON:0002616!8.01e-57!59;UBERON:0003075!1.71e-46!86;UBERON:0007284!1.71e-46!86;UBERON:0002346!3.74e-44!90;UBERON:0003056!2.21e-43!61;UBERON:0000033!8.71e-38!123;UBERON:0007023!3.90e-36!115;UBERON:0000153!9.93e-36!129;UBERON:0007811!9.93e-36!129;UBERON:0004121!1.97e-35!169;UBERON:0000924!1.87e-34!173;UBERON:0006601!1.87e-34!173;UBERON:0001871!8.44e-30!7;UBERON:0000200!1.15e-29!6;UBERON:0000349!3.43e-25!5;UBERON:0001872!9.26e-16!5;UBERON:0002771!9.85e-16!3;UBERON:0000025!1.28e-15!194;UBERON:0002021!2.90e-15!5;UBERON:0002420!2.65e-13!9;UBERON:0007245!2.65e-13!9;UBERON:0010009!2.65e-13!9;UBERON:0010011!2.65e-13!9;UBERON:0000454!2.65e-13!9;UBERON:0001870!2.23e-11!2;UBERON:0004111!2.57e-11!241;UBERON:0001876!2.86e-11!2;UBERON:0001954!4.72e-11!2;UBERON:0003022!4.72e-11!2;UBERON:0002421!4.72e-11!2;UBERON:0002600!4.72e-11!2;UBERON:0000064!5.54e-10!219;UBERON:0000475!1.05e-09!365;UBERON:0000477!2.21e-09!286;UBERON:0002298!3.47e-09!8;UBERON:0002308!2.06e-08!9;UBERON:0000125!2.06e-08!9;UBERON:0000483!3.24e-08!309;UBERON:0000119!4.49e-08!312;UBERON:0003076!2.34e-07!15;UBERON:0003057!2.34e-07!15;UBERON:0002240!4.83e-07!3;UBERON:0006331!5.83e-07!3;UBERON:0000988!6.80e-07!3|ontology_enrichment_uberon_v019=UBERON:0002619;1.32e-83;22!UBERON:0000956;1.35e-73;25!UBERON:0000203;1.35e-73;25!UBERON:0001950;2.97e-71;20!UBERON:0001869;3.57e-65;32!UBERON:0002791;1.46e-57;32!UBERON:0001893;6.45e-57;34!UBERON:0003528;5.07e-54;34!UBERON:0002020;5.07e-54;34!UBERON:0000200;1.09e-41;6!UBERON:0002780;8.64e-41;41!UBERON:0001890;8.64e-41;41!UBERON:0001871;3.76e-35;6!UBERON:0000349;7.25e-35;5!UBERON:0000073;3.29e-24;53!UBERON:0002616;3.29e-24;53!UBERON:0000955;1.59e-23;68!UBERON:0001870;2.55e-22;3!UBERON:0001017;2.84e-22;75!UBERON:0001016;6.60e-18;83!UBERON:0002702;1.59e-15;2!UBERON:0001876;3.48e-15;2!UBERON:0002771;4.46e-15;2!UBERON:0001954;6.81e-15;2!UBERON:0003022;6.81e-15;2!UBERON:0002421;6.81e-15;2!UBERON:0002600;6.81e-15;2!UBERON:0001872;7.65e-13;5!UBERON:0002022;1.09e-08;1!UBERON:0011216;1.94e-08;132!UBERON:0001882;2.42e-08;1!UBERON:0007190;2.42e-08;1!UBERON:0005403;2.42e-08;1!UBERON:0002581;4.72e-08;1!UBERON:0003112;4.72e-08;1!UBERON:0011158;4.72e-08;1!UBERON:0003128;4.72e-08;1!UBERON:0001703;4.72e-08;1!UBERON:0002241;4.72e-08;1!UBERON:0002420;1.34e-07;9!UBERON:0007245;1.34e-07;9!UBERON:0010009;1.34e-07;9!UBERON:0010011;1.34e-07;9!UBERON:0000454;1.34e-07;9!UBERON:0007023;4.56e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.24e-84,22;UBERON:0000956,9.89e-74,25;UBERON:0000203,9.89e-74,25;UBERON:0001869,3.91e-72,32;UBERON:0001950,2.57e-71,20;UBERON:0001893,8.23e-68,34;UBERON:0002791,1.42e-64,32;UBERON:0001017,7.33e-61,81;UBERON:0003528,1.08e-60,34;UBERON:0002020,1.08e-60,34;UBERON:0002780,6.45e-56,41;UBERON:0001890,6.45e-56,41;UBERON:0003080,6.45e-56,41;UBERON:0006240,6.45e-56,41;UBERON:0001016,1.78e-54,89;UBERON:0000955,9.23e-53,68;UBERON:0006238,9.23e-53,68;UBERON:0000073,1.08e-42,53;UBERON:0002616,1.08e-42,53;UBERON:0000200,1.78e-41,6;UBERON:0001049,2.96e-40,56;UBERON:0005068,2.96e-40,56;UBERON:0006241,2.96e-40,56;UBERON:0007135,2.96e-40,56;UBERON:0003056,1.02e-36,61;UBERON:0001871,3.06e-35,6;UBERON:0000349,4.15e-35,5;UBERON:0004121,1.12e-26,171;UBERON:0000924,1.12e-26,171;UBERON:0006601,1.12e-26,171;UBERON:0003075,1.68e-26,82;UBERON:0007284,1.68e-26,82;UBERON:0002346,4.10e-25,86;UBERON:0001870,3.28e-22,3;UBERON:0011216,4.70e-21,223;UBERON:0007023,1.63e-20,114;UBERON:0010371,3.55e-20,104;UBERON:0010314,5.65e-17,132;UBERON:0002702,1.91e-15,2;UBERON:0001876,2.53e-15,2;UBERON:0001954,5.15e-15,2;UBERON:0003022,5.15e-15,2;UBERON:0002421,5.15e-15,2;UBERON:0002600,5.15e-15,2;UBERON:0002771,6.35e-15,2;UBERON:0001872,6.37e-13,5;UBERON:0000025,2.76e-09,192;UBERON:0002022,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |||
|TSSclassifier=S | |||
|UniProt=P51674,Q86YB0 | |||
|association_with_transcript=-64bp_to_NM_201591,uc003iuf.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_20_at_GPM6A_5end | |||
|id=chr4:176734246..176734258,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.83e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.14e-15;10!UBERON:0006601;5.53e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p20@GPM6A | |||
}} |
Revision as of 10:06, 13 September 2013
Short description: | p20@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_GPM6A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -64bp_to_NM_201591, uc003iuf.2_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | P51674Q86YB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.83e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.