FFCP PHASE1:Hg19::chr6:46293461..46293464,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10231|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3041|TSSclassifier=S|UniProt=Q14206|association_with_transcript=-56bp_to_ENST00000330430_5end|coexpression_cluster_id=C2861|description=CAGE_peak_13_at_RCAN2_5end|id=chr6:46293461..46293464,-|ontology_enrichment_celltype=CL:0000064!2.84e-07!3;CL:0005012!2.84e-07!3;CL:0000067!2.84e-07!3;CL:0002304!2.84e-07!3|ontology_enrichment_celltype_v019=CL:0000064;3.71e-27;3!CL:0000067;3.71e-27;3!CL:0005012;3.71e-27;3!CL:0002304;3.71e-27;3!CL:0000342;1.97e-10;1!CL:0002565;1.97e-10;1!CL:0000306;1.05e-09;4!CL:0002222;1.05e-09;4!CL:0002224;1.05e-09;4!CL:0000075;5.00e-08;27|ontology_enrichment_celltype_v019_2=CL:0000064,3.89e-27,3;CL:0000067,3.89e-27,3;CL:0005012,3.89e-27,3;CL:0002304,3.89e-27,3;CL:0000342,1.98e-10,1;CL:0002565,1.98e-10,1;CL:0000306,1.12e-09,4;CL:0002222,1.12e-09,4;CL:0002224,1.12e-09,4;CL:0000075,5.16e-08,27|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;2.48e-10;1!DOID:0070004;2.48e-10;1|ontology_enrichment_disease_v019_2=DOID:4960,2.84e-10,1;DOID:0070004,2.84e-10,1|ontology_enrichment_uberon=UBERON:0003075!2.64e-47!86;UBERON:0007284!2.64e-47!86;UBERON:0001049!1.87e-46!57;UBERON:0005068!1.87e-46!57;UBERON:0006241!1.87e-46!57;UBERON:0007135!1.87e-46!57;UBERON:0002346!1.78e-44!90;UBERON:0003056!7.94e-41!61;UBERON:0002616!7.25e-40!59;UBERON:0001017!7.39e-40!82;UBERON:0005743!4.23e-39!86;UBERON:0002780!1.02e-37!41;UBERON:0001890!1.02e-37!41;UBERON:0006240!1.02e-37!41;UBERON:0000955!3.40e-37!69;UBERON:0006238!3.40e-37!69;UBERON:0003080!1.35e-36!42;UBERON:0000073!1.61e-35!94;UBERON:0001016!1.61e-35!94;UBERON:0002020!1.25e-32!34;UBERON:0003528!1.25e-32!34;UBERON:0001893!1.49e-32!34;UBERON:0002791!8.42e-31!33;UBERON:0001869!6.99e-30!32;UBERON:0000153!1.43e-29!129;UBERON:0007811!1.43e-29!129;UBERON:0000033!3.14e-29!123;UBERON:0004121!1.52e-23!169;UBERON:0000924!1.31e-22!173;UBERON:0006601!1.31e-22!173;UBERON:0000956!3.47e-22!25;UBERON:0000203!3.47e-22!25;UBERON:0002619!1.93e-20!22;UBERON:0001950!2.69e-20!20;UBERON:0007023!9.46e-20!115;UBERON:0002308!4.81e-12!9;UBERON:0000125!4.81e-12!9;UBERON:0000200!1.53e-11!6;UBERON:0000483!3.85e-11!309;UBERON:0002298!4.24e-11!8;UBERON:0000119!7.29e-11!312;UBERON:0003076!8.28e-11!15;UBERON:0003057!8.28e-11!15;UBERON:0000475!3.56e-10!365;UBERON:0002021!4.91e-10!5;UBERON:0000488!3.37e-09!4;UBERON:0004733!3.51e-09!12;UBERON:0002028!3.51e-09!12;UBERON:0007277!3.51e-09!12;UBERON:0009663!7.78e-09!7;UBERON:0002203!9.66e-09!6;UBERON:0001768!9.66e-09!6;UBERON:0007625!1.84e-08!11;UBERON:0004732!2.41e-08!13;UBERON:0001801!4.12e-08!14;UBERON:0000970!5.27e-08!20;UBERON:0000064!1.42e-07!219;UBERON:0002104!1.65e-07!21;UBERON:0000025!1.92e-07!194;UBERON:0001456!2.22e-07!21;UBERON:0001778!2.84e-07!3;UBERON:0001775!2.84e-07!3;UBERON:0000019!7.54e-07!19;UBERON:0000047!7.54e-07!19;UBERON:0004088!7.54e-07!19;UBERON:0003072!7.54e-07!19;UBERON:0003071!7.54e-07!19;UBERON:0004128!7.54e-07!19;UBERON:0000988!8.42e-07!3|ontology_enrichment_uberon_v019=UBERON:0000488;8.56e-36;4!UBERON:0007625;1.75e-28;11!UBERON:0001778;3.71e-27;3!UBERON:0001775;3.71e-27;3!UBERON:0001950;3.03e-25;20!UBERON:0002203;5.61e-24;6!UBERON:0001768;5.61e-24;6!UBERON:0002200;5.61e-24;6!UBERON:0002619;5.71e-23;22!UBERON:0001801;2.64e-22;14!UBERON:0000956;3.28e-20;25!UBERON:0000203;3.28e-20;25!UBERON:0001869;1.23e-17;32!UBERON:0001893;3.53e-17;34!UBERON:0000019;2.49e-16;19!UBERON:0000047;2.49e-16;19!UBERON:0004088;2.49e-16;19!UBERON:0010230;2.49e-16;19!UBERON:0002021;3.92e-16;5!UBERON:0000970;1.71e-15;20!UBERON:0002104;9.81e-15;21!UBERON:0001456;9.81e-15;21!UBERON:0003528;1.11e-14;34!UBERON:0002020;1.11e-14;34!UBERON:0002780;1.29e-14;41!UBERON:0001890;1.29e-14;41!UBERON:0002791;2.36e-14;32!UBERON:0000020;2.05e-13;23!UBERON:0002298;2.15e-13;6!UBERON:0006876;3.44e-13;11!UBERON:0001032;7.74e-13;24!UBERON:0004456;7.74e-13;24!UBERON:0000988;2.38e-12;3!UBERON:0000073;4.94e-12;53!UBERON:0002616;4.94e-12;53!UBERON:0002506;1.97e-10;1!UBERON:0001769;1.97e-10;1!UBERON:0007190;2.48e-10;1!UBERON:0002581;3.39e-10;1!UBERON:0002902;6.91e-10;1!UBERON:0002022;6.91e-10;1!UBERON:0009899;6.91e-10;1!UBERON:0010077;1.05e-09;4!UBERON:0005389;1.05e-09;4!UBERON:0000484;1.05e-09;4!UBERON:0000965;1.05e-09;4!UBERON:0001803;1.05e-09;4!UBERON:0010371;1.34e-09;31!UBERON:0000955;1.60e-08;68!UBERON:0001872;5.30e-08;5!UBERON:0004733;5.96e-07;12!UBERON:0002028;5.96e-07;12!UBERON:0000200;7.58e-07;6!UBERON:0001017;8.95e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0000488,8.98e-36,4;UBERON:0003075,1.12e-34,82;UBERON:0007284,1.12e-34,82;UBERON:0003056,2.71e-33,61;UBERON:0002346,6.02e-33,86;UBERON:0007625,1.93e-28,11;UBERON:0001778,3.89e-27,3;UBERON:0001775,3.89e-27,3;UBERON:0010371,8.74e-27,104;UBERON:0001950,2.19e-25,20;UBERON:0000073,8.68e-25,53;UBERON:0002616,8.68e-25,53;UBERON:0002203,5.79e-24,6;UBERON:0001768,5.79e-24,6;UBERON:0002200,5.79e-24,6;UBERON:0001049,2.27e-23,56;UBERON:0005068,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10231 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3041 | |||
|TSSclassifier=S | |||
|UniProt=Q14206 | |||
|association_with_transcript=-56bp_to_ENST00000330430_5end | |||
|coexpression_cluster_id=C2861 | |||
|description=CAGE_peak_13_at_RCAN2_5end | |||
|id=chr6:46293461..46293464,- | |||
|ontology_enrichment_celltype=CL:0000064!2.84e-07!3;CL:0005012!2.84e-07!3;CL:0000067!2.84e-07!3;CL:0002304!2.84e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.71e-27;3!CL:0000067;3.71e-27;3!CL:0005012;3.71e-27;3!CL:0002304;3.71e-27;3!CL:0000342;1.97e-10;1!CL:0002565;1.97e-10;1!CL:0000306;1.05e-09;4!CL:0002222;1.05e-09;4!CL:0002224;1.05e-09;4!CL:0000075;5.00e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.89e-27,3;CL:0000067,3.89e-27,3;CL:0005012,3.89e-27,3;CL:0002304,3.89e-27,3;CL:0000342,1.98e-10,1;CL:0002565,1.98e-10,1;CL:0000306,1.12e-09,4;CL:0002222,1.12e-09,4;CL:0002224,1.12e-09,4;CL:0000075,5.16e-08,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;2.48e-10;1!DOID:0070004;2.48e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.84e-10,1;DOID:0070004,2.84e-10,1 | |||
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|short_description=p13@RCAN2 | |||
}} |
Revision as of 21:15, 13 September 2013
Short description: | p13@RCAN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_RCAN2_5end |
Coexpression cluster: | C2861_Ciliary_anaplastic_paracentral_pons_parietal_postcentral_medial |
Association with transcript: | -56bp_to_ENST00000330430_5end |
EntrezGene: | RCAN2 |
HGNC: | 3041 |
UniProt: | Q14206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.89e-27 | 3 |
ciliated epithelial cell | 3.89e-27 | 3 |
multi-ciliated epithelial cell | 3.89e-27 | 3 |
non-pigmented ciliary epithelial cell | 3.89e-27 | 3 |
pigment cell (sensu Vertebrata) | 1.98e-10 | 1 |
iris pigment epithelial cell | 1.98e-10 | 1 |
crystallin accumulating cell | 1.12e-09 | 4 |
vertebrate lens cell | 1.12e-09 | 4 |
lens epithelial cell | 1.12e-09 | 4 |
columnar/cuboidal epithelial cell | 5.16e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.84e-10 | 1 |
myeloma | 2.84e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.