FFCP PHASE1:Hg19::chr7:103630073..103630088,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5649|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9957|TSSclassifier=S|UniProt=P78509,F8WF74|association_with_transcript=-110bp_to_ENST00000343529,ENST00000424685,ENST00000424828,ENST00000428762,ENST00000448171,NM_005045,NM_173054,uc003vca.2,uc010liz.2_5end|coexpression_cluster_id=C2873|description=CAGE_peak_2_at_RELN_5end|id=chr7:103630073..103630088,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000064;1.70e-07;3!CL:0000067;1.70e-07;3!CL:0005012;1.70e-07;3!CL:0002304;1.70e-07;3!CL:0002138;6.67e-07;6|ontology_enrichment_celltype_v019_2=CL:0000064,1.14e-07,3;CL:0000067,1.14e-07,3;CL:0005012,1.14e-07,3;CL:0002304,1.14e-07,3;CL:0005020,6.21e-07,6;CL:0002138,6.21e-07,6;CL:0005022,6.21e-07,6|ontology_enrichment_development_v019=UBERON:0006215;9.48e-09;3!CL:0005022;6.67e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.41e-29!115;UBERON:0003075!4.44e-27!86;UBERON:0007284!4.44e-27!86;UBERON:0002346!7.39e-26!90;UBERON:0001049!5.91e-23!57;UBERON:0005068!5.91e-23!57;UBERON:0006241!5.91e-23!57;UBERON:0007135!5.91e-23!57;UBERON:0005743!1.08e-22!86;UBERON:0000073!1.29e-20!94;UBERON:0001016!1.29e-20!94;UBERON:0001017!1.73e-20!82;UBERON:0000955!6.09e-20!69;UBERON:0006238!6.09e-20!69;UBERON:0002616!7.13e-20!59;UBERON:0000477!1.27e-19!286;UBERON:0003056!1.95e-19!61;UBERON:0000025!2.15e-18!194;UBERON:0004111!7.10e-18!241;UBERON:0000119!1.61e-17!312;UBERON:0000483!2.88e-17!309;UBERON:0003080!7.90e-16!42;UBERON:0000153!1.62e-15!129;UBERON:0007811!1.62e-15!129;UBERON:0002780!2.81e-15!41;UBERON:0001890!2.81e-15!41;UBERON:0006240!2.81e-15!41;UBERON:0000033!7.28e-15!123;UBERON:0004121!4.38e-13!169;UBERON:0000924!9.11e-13!173;UBERON:0006601!9.11e-13!173;UBERON:0001893!2.10e-12!34;UBERON:0002020!2.96e-12!34;UBERON:0003528!2.96e-12!34;UBERON:0000475!5.29e-12!365;UBERON:0002791!7.86e-12!33;UBERON:0001869!1.14e-11!32;UBERON:0000481!3.34e-11!347;UBERON:0001950!5.10e-10!20;UBERON:0002619!5.99e-10!22;UBERON:0000468!3.25e-09!659;UBERON:0000956!7.10e-09!25;UBERON:0000203!7.10e-09!25;UBERON:0003076!1.86e-08!15;UBERON:0003057!1.86e-08!15;UBERON:0000467!3.79e-08!625;UBERON:0000480!4.74e-08!626;UBERON:0000064!5.53e-08!219;UBERON:0000062!1.38e-07!511;UBERON:0007625!2.16e-07!11|ontology_enrichment_uberon_v019=UBERON:0000970;1.40e-09;20!UBERON:0007625;3.45e-09;11!UBERON:0000488;3.69e-09;4!UBERON:0002104;5.08e-09;21!UBERON:0000019;4.20e-08;19!UBERON:0000047;4.20e-08;19!UBERON:0004088;4.20e-08;19!UBERON:0010230;4.20e-08;19!UBERON:0000020;4.77e-08;23!UBERON:0001032;1.26e-07;24!UBERON:0004456;1.26e-07;24!UBERON:0001778;1.70e-07;3!UBERON:0001775;1.70e-07;3!UBERON:0000955;2.22e-07;68!UBERON:0000073;3.64e-07;53!UBERON:0002616;3.64e-07;53!UBERON:0001456;3.67e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0003075,2.79e-17,82;UBERON:0007284,2.79e-17,82;UBERON:0002346,4.30e-16,86;UBERON:0010371,2.28e-15,104;UBERON:0003056,1.16e-12,61;UBERON:0000955,7.20e-12,68;UBERON:0006238,7.20e-12,68;UBERON:0001049,1.09e-11,56;UBERON:0005068,1.09e-11,56;UBERON:0006241,1.09e-11,56;UBERON:0007135,1.09e-11,56;UBERON:0000073,3.37e-11,53;UBERON:0002616,3.37e-11,53;UBERON:0001017,3.62e-11,81;UBERON:0010314,8.46e-11,132;UBERON:0001016,1.84e-10,89;UBERON:0000488,2.14e-09,4;UBERON:0007625,2.82e-09,11;UBERON:0004121,3.50e-09,171;UBERON:0000924,3.50e-09,171;UBERON:0006601,3.50e-09,171;UBERON:0000970,4.52e-09,21;UBERON:0002104,4.52e-09,21;UBERON:0011216,4.77e-09,223;UBERON:0000483,2.73e-08,306;UBERON:0000025,2.85e-08,192;UBERON:0000119,4.36e-08,309;UBERON:0001778,1.14e-07,3;UBERON:0001775,1.14e-07,3;UBERON:0000020,1.14e-07,24;UBERON:0001032,1.14e-07,24;UBERON:0004456,1.14e-07,24;UBERON:0000019,1.17e-07,20;UBERON:0000047,1.17e-07,20;UBERON:0010312,1.17e-07,20;UBERON:0004088,1.17e-07,20;UBERON:0010230,1.17e-07,20;UBERON:0003072,1.17e-07,20;UBERON:0004128,1.17e-07,20;UBERON:0003071,1.17e-07,20;UBERON:0004111,1.95e-07,240;UBERON:0003076,7.39e-07,15;UBERON:0003057,7.39e-07,15;UBERON:0002780,7.70e-07,41;UBERON:0001890,7.70e-07,41;UBERON:0003080,7.70e-07,41;UBERON:0006240,7.70e-07,41;UBERON:0001456,8.42e-07,22|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.994192127183747,0,0.602694528023977,0,0,0.369363174230364,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,1.98523116044542,2.66075276955077,5.35792192728069,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.347140501607594,1.13061588384802,0,0.275118041940067,0.208994966536811,0,0,4.01664735317604,0,2.28081631715554,6.10155143870424,1.83831540172934,2.43042584364528,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.13240918081321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_description=p2@RELN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5649 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9957 | |||
|TSSclassifier=S | |||
|UniProt=P78509,F8WF74 | |||
|association_with_transcript=-110bp_to_ENST00000343529,ENST00000424685,ENST00000424828,ENST00000428762,ENST00000448171,NM_005045,NM_173054,uc003vca.2,uc010liz.2_5end | |||
|coexpression_cluster_id=C2873 | |||
|description=CAGE_peak_2_at_RELN_5end | |||
|id=chr7:103630073..103630088,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.70e-07;3!CL:0000067;1.70e-07;3!CL:0005012;1.70e-07;3!CL:0002304;1.70e-07;3!CL:0002138;6.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.14e-07,3;CL:0000067,1.14e-07,3;CL:0005012,1.14e-07,3;CL:0002304,1.14e-07,3;CL:0005020,6.21e-07,6;CL:0002138,6.21e-07,6;CL:0005022,6.21e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.48e-09;3!CL:0005022;6.67e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.41e-29!115;UBERON:0003075!4.44e-27!86;UBERON:0007284!4.44e-27!86;UBERON:0002346!7.39e-26!90;UBERON:0001049!5.91e-23!57;UBERON:0005068!5.91e-23!57;UBERON:0006241!5.91e-23!57;UBERON:0007135!5.91e-23!57;UBERON:0005743!1.08e-22!86;UBERON:0000073!1.29e-20!94;UBERON:0001016!1.29e-20!94;UBERON:0001017!1.73e-20!82;UBERON:0000955!6.09e-20!69;UBERON:0006238!6.09e-20!69;UBERON:0002616!7.13e-20!59;UBERON:0000477!1.27e-19!286;UBERON:0003056!1.95e-19!61;UBERON:0000025!2.15e-18!194;UBERON:0004111!7.10e-18!241;UBERON:0000119!1.61e-17!312;UBERON:0000483!2.88e-17!309;UBERON:0003080!7.90e-16!42;UBERON:0000153!1.62e-15!129;UBERON:0007811!1.62e-15!129;UBERON:0002780!2.81e-15!41;UBERON:0001890!2.81e-15!41;UBERON:0006240!2.81e-15!41;UBERON:0000033!7.28e-15!123;UBERON:0004121!4.38e-13!169;UBERON:0000924!9.11e-13!173;UBERON:0006601!9.11e-13!173;UBERON:0001893!2.10e-12!34;UBERON:0002020!2.96e-12!34;UBERON:0003528!2.96e-12!34;UBERON:0000475!5.29e-12!365;UBERON:0002791!7.86e-12!33;UBERON:0001869!1.14e-11!32;UBERON:0000481!3.34e-11!347;UBERON:0001950!5.10e-10!20;UBERON:0002619!5.99e-10!22;UBERON:0000468!3.25e-09!659;UBERON:0000956!7.10e-09!25;UBERON:0000203!7.10e-09!25;UBERON:0003076!1.86e-08!15;UBERON:0003057!1.86e-08!15;UBERON:0000467!3.79e-08!625;UBERON:0000480!4.74e-08!626;UBERON:0000064!5.53e-08!219;UBERON:0000062!1.38e-07!511;UBERON:0007625!2.16e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000970;1.40e-09;20!UBERON:0007625;3.45e-09;11!UBERON:0000488;3.69e-09;4!UBERON:0002104;5.08e-09;21!UBERON:0000019;4.20e-08;19!UBERON:0000047;4.20e-08;19!UBERON:0004088;4.20e-08;19!UBERON:0010230;4.20e-08;19!UBERON:0000020;4.77e-08;23!UBERON:0001032;1.26e-07;24!UBERON:0004456;1.26e-07;24!UBERON:0001778;1.70e-07;3!UBERON:0001775;1.70e-07;3!UBERON:0000955;2.22e-07;68!UBERON:0000073;3.64e-07;53!UBERON:0002616;3.64e-07;53!UBERON:0001456;3.67e-07;21 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.994192127183747,0,0.602694528023977,0,0,0.369363174230364,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,1.98523116044542,2.66075276955077,5.35792192728069,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.347140501607594,1.13061588384802,0,0.275118041940067,0.208994966536811,0,0,4.01664735317604,0,2.28081631715554,6.10155143870424,1.83831540172934,2.43042584364528,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.89694817844431,0.427114777637135,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,6.49868897349544,0,0,1.54411029268673,0,0,0,0,0,0,0,0.34779121492523,5.9878434060269,5.91902435820403,4.62985512576611,4.75635380586496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0,0,0,0,0,0,2.60279707715243,0,0.502548796003046,0,0,0,0,0.736148950314839,1.00034104211935,0,0.831883446123229,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.768834895534206,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0.462092022626489,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,1.54227252690289,0,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0.328014645699706,3.57916234130733,1.13345112812495,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22849920267187,0,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38524393686274,0,0,0,0,0.439524537815682,0,0,0,0,0,0,1.9882952955326,0.844016498463076,0.333926115068718,0,0,1.39473591775749,0.552567831062295,0,0,0,0.622079175323615,0,0.179021174675609,0,0.394573622547734,0,0,2.90799823828566,0.649376687132959,1.99613798001194,0,0,0.724999575434793,0,0,0,2.41320361269025,0,0.694499979733169,0,1.68835014075571,21.3614430843917,31.4045098204678,40.1944761776825,0.87754158861589,0,0,0.461701551022782,0,0,0,0,0,0,1.5991043280559,0,0,3.49044531990328,2.93274358802335,4.11731322067253,3.85989650044438,0.189753732724185,0.158936578980379,4.64195741961659,0,0,0,0,0.265372693510018,1.22206028986725,0.296521128680622,0.247127877893006,0.417687798021821,0.404406797884062,1.60515529459758,0.702793337176017,0,0,0,0,2.41981432097328,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,5.64951851951331,0,0.397429223405979,1.70939149080872,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0.199679000498991,0,0.89268582976749,1.2764859772478,0.720599767084807,0,3.62402638613229,4.03837706067716,5.05526578906387,0,0,0,1.22583065500418,0,0,0,0,0,1.21499113316049,0,0,0.367182116944987,0,1.25501137532991,0,1.42939065274673,0.662091970365432,0,0,0,0.979762080328227,1.19730191562487,0.656740165994712,0,0,3.07759690723973,3.97520666736664,0.258565912723101,0.66116300871345,0,0,0.213574825135389,0.314408610199332,1.24271716604159,4.46549419630756,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,2.29363678276028,2.3295100822739,0.807253238237985,3.04366996859708,0,0,0,0,20.1384009496959,4.34763085832475,0,0,0,0,0,0.889811221596536,0.228840068396924,0.302461847526478,0.15543720058278,0.147855149989634,0.159296767163702,0.899606224327209,0.155262956876259,0.829412415681711,0.53168342911599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,6.14979644611072,0,0.303859956177382,0.553033744606923,0,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,4.60419736693146,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,1.28458450192919,2.8339315265117,0.478901577171454,0.41023272848151,1.26035848110859,0.691572524642179,1.13032951942296,0,0,0,0,0,0,1.3807198521202,0,0.225630985047772,0,0,0,0,0,0.87798860003913,0,0,0.887821342714695,2.7348740450911,0,0,0.527613733078862,0,4.28561468702629,43.7168838884471,0.606965604236632,0.91064876540519,0,0,0,1.15548546060614,1.38122824481983,0,0.333694205676207,0.313972371402056,2.19961825882403,0,2.73947616152849,4.10262423315381,0,3.57382720883282,3.47629945811999,0,0,1.60342272946051,0.20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| |||
|short_description=p2@RELN | |||
}} |
Revision as of 22:29, 13 September 2013
Short description: | p2@RELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RELN_5end |
Coexpression cluster: | C2873_cerebellum_pineal_mesothelioma_Endothelial_Lymphatic_merkel_chronic |
Association with transcript: | -110bp_to_ENST00000343529, ENST00000424685, ENST00000424828, ENST00000428762, ENST00000448171, NM_005045, NM_173054, uc003vca.2, uc010liz.2_5end |
EntrezGene: | RELN |
HGNC: | 9957 |
UniProt: | P78509F8WF74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.14e-07 | 3 |
ciliated epithelial cell | 1.14e-07 | 3 |
multi-ciliated epithelial cell | 1.14e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.14e-07 | 3 |
lymphangioblast | 6.21e-07 | 6 |
endothelial cell of lymphatic vessel | 6.21e-07 | 6 |
vascular lymphangioblast | 6.21e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.