FFCP PHASE1:Mm9::chr3:64912918..64912959,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16497|HGNC=|MCL_coexpression_id=90|UniProt=P63143,Q8CD65|association_with_transcript=-346bp_to_ENSMUST00000049230,ENSMUST00000159525_5end|description=CAGE_peak_3_at_Kcnab1_5end|id=chr3:64912918..64912959,+|ontology_enrichment_celltype=CL:0000393!7.12e-09!39;CL:0000211!7.12e-09!39;CL:0000055!2.52e-08!50|ontology_enrichment_celltype_v019_2=CL:0000393,4.53e-07,39;CL:0000211,4.53e-07,39;CL:0002494,8.17e-07,3;CL:0000737,8.17e-07,3;CL:0000746,8.17e-07,3;CL:0000513,8.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!8.71e-20!71;UBERON:0003075!8.71e-20!71;UBERON:0007284!8.71e-20!71;UBERON:0000073!1.92e-19!75;UBERON:0001016!1.92e-19!75;UBERON:0001017!4.20e-19!73;UBERON:0005743!4.20e-19!73;UBERON:0000033!1.19e-18!63;UBERON:0001049!3.48e-17!52;UBERON:0005068!3.48e-17!52;UBERON:0006241!3.48e-17!52;UBERON:0007135!3.48e-17!52;UBERON:0004121!8.25e-17!102;UBERON:0000924!8.25e-17!102;UBERON:0006601!8.25e-17!102;UBERON:0000955!1.49e-16!50;UBERON:0006238!1.49e-16!50;UBERON:0002616!4.58e-16!49;UBERON:0003056!5.18e-15!49;UBERON:0002020!1.36e-13!34;UBERON:0003080!9.88e-12!40;UBERON:0000153!1.35e-11!94;UBERON:0002791!3.24e-11!29;UBERON:0003528!3.24e-11!29;UBERON:0001893!3.24e-11!29;UBERON:0002780!4.08e-11!39;UBERON:0001890!4.08e-11!39;UBERON:0006240!4.08e-11!39;UBERON:0007811!1.36e-09!86;UBERON:0002021!4.06e-08!10;UBERON:0000411!4.06e-08!10;UBERON:0001950!4.06e-08!10;UBERON:0000956!5.18e-08!21;UBERON:0001869!5.18e-08!21;UBERON:0000203!5.18e-08!21;UBERON:0002619!6.30e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.38e-27,54;UBERON:0002346,5.49e-26,64;UBERON:0003075,5.49e-26,64;UBERON:0007284,5.49e-26,64;UBERON:0001049,2.67e-24,52;UBERON:0005068,2.67e-24,52;UBERON:0006241,2.67e-24,52;UBERON:0007135,2.67e-24,52;UBERON:0001017,7.46e-24,73;UBERON:0001016,5.64e-23,75;UBERON:0004121,1.97e-22,95;UBERON:0000924,1.97e-22,95;UBERON:0006601,1.97e-22,95;UBERON:0010371,1.08e-21,73;UBERON:0002616,1.96e-20,46;UBERON:0000955,7.46e-20,47;UBERON:0006238,7.46e-20,47;UBERON:0010314,1.41e-19,92;UBERON:0003056,2.32e-19,49;UBERON:0002020,2.49e-19,34;UBERON:0002021,1.45e-17,10;UBERON:0000411,1.45e-17,10;UBERON:0001950,1.45e-17,10;UBERON:0003528,4.79e-17,29;UBERON:0002791,4.79e-17,29;UBERON:0001893,4.79e-17,29;UBERON:0003080,3.18e-16,40;UBERON:0002780,5.68e-15,39;UBERON:0001890,5.68e-15,39;UBERON:0006240,5.68e-15,39;UBERON:0002619,1.03e-13,17;UBERON:0000956,1.01e-12,21;UBERON:0001869,1.01e-12,21;UBERON:0000203,1.01e-12,21;UBERON:0000025,2.06e-10,114;UBERON:0004111,6.24e-10,122;UBERON:0003076,6.55e-09,12;UBERON:0003057,6.55e-09,12;UBERON:0002950,1.37e-07,4;UBERON:0001891,1.37e-07,4;UBERON:0009616,1.37e-07,4;UBERON:0010286,1.37e-07,4|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,0.709638518536602,0.367093504323363,0,0.65407546914134,0.878744730937887,0.972149495371417,1.25987779462826,0,0,0,0,4.3734104126111,7.73640287834643,9.7977697532714,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0,0.571301968807607,3.09215957332259,0,0.191690942036473,0,3.30347642998166,7.78892762319645,6.60508093001847,0.131886287730194,0.365950574409639,0.52091337055676,3.90856198601933,2.25105044012672,3.81995619442025,1.76777151284201,2.42031857358475,0.559198337475902,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0.539703191637817,0,0,0.421333260395256,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0,0.578397427679647,0,0.323533699894818,0,0,0,5.85561594023094,5.65506108396329,0.255457055208591,0,0,0,5.24267237916879,72.7425958481616,1.50785222535437,10.7771078519211,9.2057564638919,10.1816141834184,18.9822277789276,0.305518091550949,0.124406970610093,0,0.210441855886474,1.30120442962704,1.14951052216736,1.0803727788321,0.452114453507145,0.408218994907967,1.15302348256365,0.468508622798644,2.06962696591213,0.431135985865684,0.567318240503458,1.40760899331159,0.876782929710299,0.556094498451196,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0,0.465067889500816,0,0,0,0,0,0,0,0,23.131894342054,1.13195073617213,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0.596869416123452,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.49095073923223,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,8.18808008937739,4.68846746368813,0.327869890753351,0,0.315508219416257,0.780877488593277,0.646270193198397,0,0.222798674082394,0.283076530788832,0,0.876767573733936,1.97643888973262,0.963963949265421,1.27746076687442,0,0.651547837414304,0.329940245945071,0,0.971122544619926,0.30232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| ||
|EntrezGene=16497 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=P63143,Q8CD65 | |||
|association_with_transcript=-346bp_to_ENSMUST00000049230,ENSMUST00000159525_5end | |||
|description=CAGE_peak_3_at_Kcnab1_5end | |||
|id=chr3:64912918..64912959,+ | |||
|ontology_enrichment_celltype=CL:0000393!7.12e-09!39;CL:0000211!7.12e-09!39;CL:0000055!2.52e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.53e-07,39;CL:0000211,4.53e-07,39;CL:0002494,8.17e-07,3;CL:0000737,8.17e-07,3;CL:0000746,8.17e-07,3;CL:0000513,8.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.71e-20!71;UBERON:0003075!8.71e-20!71;UBERON:0007284!8.71e-20!71;UBERON:0000073!1.92e-19!75;UBERON:0001016!1.92e-19!75;UBERON:0001017!4.20e-19!73;UBERON:0005743!4.20e-19!73;UBERON:0000033!1.19e-18!63;UBERON:0001049!3.48e-17!52;UBERON:0005068!3.48e-17!52;UBERON:0006241!3.48e-17!52;UBERON:0007135!3.48e-17!52;UBERON:0004121!8.25e-17!102;UBERON:0000924!8.25e-17!102;UBERON:0006601!8.25e-17!102;UBERON:0000955!1.49e-16!50;UBERON:0006238!1.49e-16!50;UBERON:0002616!4.58e-16!49;UBERON:0003056!5.18e-15!49;UBERON:0002020!1.36e-13!34;UBERON:0003080!9.88e-12!40;UBERON:0000153!1.35e-11!94;UBERON:0002791!3.24e-11!29;UBERON:0003528!3.24e-11!29;UBERON:0001893!3.24e-11!29;UBERON:0002780!4.08e-11!39;UBERON:0001890!4.08e-11!39;UBERON:0006240!4.08e-11!39;UBERON:0007811!1.36e-09!86;UBERON:0002021!4.06e-08!10;UBERON:0000411!4.06e-08!10;UBERON:0001950!4.06e-08!10;UBERON:0000956!5.18e-08!21;UBERON:0001869!5.18e-08!21;UBERON:0000203!5.18e-08!21;UBERON:0002619!6.30e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.38e-27,54;UBERON:0002346,5.49e-26,64;UBERON:0003075,5.49e-26,64;UBERON:0007284,5.49e-26,64;UBERON:0001049,2.67e-24,52;UBERON:0005068,2.67e-24,52;UBERON:0006241,2.67e-24,52;UBERON:0007135,2.67e-24,52;UBERON:0001017,7.46e-24,73;UBERON:0001016,5.64e-23,75;UBERON:0004121,1.97e-22,95;UBERON:0000924,1.97e-22,95;UBERON:0006601,1.97e-22,95;UBERON:0010371,1.08e-21,73;UBERON:0002616,1.96e-20,46;UBERON:0000955,7.46e-20,47;UBERON:0006238,7.46e-20,47;UBERON:0010314,1.41e-19,92;UBERON:0003056,2.32e-19,49;UBERON:0002020,2.49e-19,34;UBERON:0002021,1.45e-17,10;UBERON:0000411,1.45e-17,10;UBERON:0001950,1.45e-17,10;UBERON:0003528,4.79e-17,29;UBERON:0002791,4.79e-17,29;UBERON:0001893,4.79e-17,29;UBERON:0003080,3.18e-16,40;UBERON:0002780,5.68e-15,39;UBERON:0001890,5.68e-15,39;UBERON:0006240,5.68e-15,39;UBERON:0002619,1.03e-13,17;UBERON:0000956,1.01e-12,21;UBERON:0001869,1.01e-12,21;UBERON:0000203,1.01e-12,21;UBERON:0000025,2.06e-10,114;UBERON:0004111,6.24e-10,122;UBERON:0003076,6.55e-09,12;UBERON:0003057,6.55e-09,12;UBERON:0002950,1.37e-07,4;UBERON:0001891,1.37e-07,4;UBERON:0009616,1.37e-07,4;UBERON:0010286,1.37e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,0.709638518536602,0.367093504323363,0,0.65407546914134,0.878744730937887,0.972149495371417,1.25987779462826,0,0,0,0,4.3734104126111,7.73640287834643,9.7977697532714,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0,0.571301968807607,3.09215957332259,0,0.191690942036473,0,3.30347642998166,7.78892762319645,6.60508093001847,0.131886287730194,0.365950574409639,0.52091337055676,3.90856198601933,2.25105044012672,3.81995619442025,1.76777151284201,2.42031857358475,0.559198337475902,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0.539703191637817,0,0,0.421333260395256,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0,0.578397427679647,0,0.323533699894818,0,0,0,5.85561594023094,5.65506108396329,0.255457055208591,0,0,0,5.24267237916879,72.7425958481616,1.50785222535437,10.7771078519211,9.2057564638919,10.1816141834184,18.9822277789276,0.305518091550949,0.124406970610093,0,0.210441855886474,1.30120442962704,1.14951052216736,1.0803727788321,0.452114453507145,0.408218994907967,1.15302348256365,0.468508622798644,2.06962696591213,0.431135985865684,0.567318240503458,1.40760899331159,0.876782929710299,0.556094498451196,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0,0.465067889500816,0,0,0,0,0,0,0,0,23.131894342054,1.13195073617213,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0.596869416123452,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.49095073923223,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,8.18808008937739,4.68846746368813,0.327869890753351,0,0.315508219416257,0.780877488593277,0.646270193198397,0,0.222798674082394,0.283076530788832,0,0.876767573733936,1.97643888973262,0.963963949265421,1.27746076687442,0,0.651547837414304,0.329940245945071,0,0.971122544619926,0.302323556964751,0.754420319023592,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0,0.540183282093931,0,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0,0,0.291480836629851,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0,0,0.218362563746178,0.134864346384821,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0.645799117388655,0,0.58678619322877,0,0,0,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0.36630324853453,0,1.00314420807073,6.21227026878773,3.68260189205742,5.15605962095457,4.29632955859219,6.85082519770642,4.5323633843382,6.75022500231806,4.05289082901798,5.89085131679466,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0,0.468207537349412,0.384150914429216,0.229741875822453,0.476293691283074,0.115884325944855,0.38581844092741,1.64834360321323,0.441596760403192,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.338458431566706,0,0.263069711437843,0.271608227691724,0,0.830445126869219,0.788035859004508,0.409231043169689,0.464810523557898,0.192906610981141,0.749431733813838,0.467863216890817,0,0.382576664137687,0,0.463735671240843 | |||
|short_description=p3@Kcnab1 | |||
}} |
Revision as of 02:25, 14 September 2013
Short description: | p3@Kcnab1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnab1_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -346bp_to_ENSMUST00000049230, ENSMUST00000159525_5end |
EntrezGene: | Kcnab1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.53e-07 | 39 |
electrically active cell | 4.53e-07 | 39 |
cardiocyte | 8.17e-07 | 3 |
striated muscle cell | 8.17e-07 | 3 |
cardiac muscle cell | 8.17e-07 | 3 |
cardiac muscle myoblast | 8.17e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.