FFCP PHASE1:Hg19::chrX:21392529..21392549,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22866|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19701|TSSclassifier=S|UniProt=B7ZLJ1,B4DGR4,B3KPN2,Q8WXI2|association_with_transcript=0bp_to_ENST00000425654,ENST00000543067,NM_001168647,NM_001168648,NM_001168649,NM_014927_5end|coexpression_cluster_id=C3|description=CAGE_peak_1_at_CNKSR2_5end|id=chrX:21392529..21392549,+|ontology_enrichment_celltype=CL:0000542!3.33e-07!53;CL:0000051!3.33e-07!53;CL:0000838!7.47e-07!52|ontology_enrichment_celltype_v019=CL:0000236;1.94e-09;13|ontology_enrichment_celltype_v019_2=CL:0000542,4.74e-09,53;CL:0000051,4.74e-09,53;CL:0000047,1.32e-08,8;CL:0000236,1.34e-08,14;CL:0000838,1.46e-08,52|ontology_enrichment_development_v019=UBERON:0006601;3.75e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!1.19e-37!86;UBERON:0001017!6.30e-36!82;UBERON:0001049!1.67e-35!57;UBERON:0005068!1.67e-35!57;UBERON:0006241!1.67e-35!57;UBERON:0007135!1.67e-35!57;UBERON:0000073!3.32e-35!94;UBERON:0001016!3.32e-35!94;UBERON:0007023!1.38e-34!115;UBERON:0003080!3.43e-29!42;UBERON:0002780!7.85e-29!41;UBERON:0001890!7.85e-29!41;UBERON:0006240!7.85e-29!41;UBERON:0002616!1.84e-28!59;UBERON:0000955!2.57e-28!69;UBERON:0006238!2.57e-28!69;UBERON:0003075!2.35e-27!86;UBERON:0007284!2.35e-27!86;UBERON:0001893!2.08e-25!34;UBERON:0002020!2.28e-25!34;UBERON:0003528!2.28e-25!34;UBERON:0002791!1.07e-24!33;UBERON:0001869!1.15e-24!32;UBERON:0002346!1.25e-24!90;UBERON:0003056!1.25e-21!61;UBERON:0000956!1.91e-19!25;UBERON:0000203!1.91e-19!25;UBERON:0002619!3.54e-18!22;UBERON:0001950!1.27e-16!20;UBERON:0004121!1.44e-15!169;UBERON:0000153!7.60e-15!129;UBERON:0007811!7.60e-15!129;UBERON:0000924!2.38e-14!173;UBERON:0006601!2.38e-14!173;UBERON:0000033!7.47e-14!123;UBERON:0002420!1.06e-07!9;UBERON:0007245!1.06e-07!9;UBERON:0010009!1.06e-07!9;UBERON:0010011!1.06e-07!9;UBERON:0000454!1.06e-07!9;UBERON:0003076!1.25e-07!15;UBERON:0003057!1.25e-07!15;UBERON:0002308!2.34e-07!9;UBERON:0000125!2.34e-07!9;UBERON:0001871!4.79e-07!7|ontology_enrichment_uberon_v019=UBERON:0001869;8.52e-32;32!UBERON:0001893;3.10e-31;34!UBERON:0002791;3.28e-31;32!UBERON:0003528;3.35e-31;34!UBERON:0002020;3.35e-31;34!UBERON:0002780;9.08e-30;41!UBERON:0001890;9.08e-30;41!UBERON:0000956;1.79e-27;25!UBERON:0000203;1.79e-27;25!UBERON:0000073;1.86e-26;53!UBERON:0002616;1.86e-26;53!UBERON:0002619;1.62e-25;22!UBERON:0001950;2.86e-23;20!UBERON:0001017;3.58e-19;75!UBERON:0000955;6.21e-19;68!UBERON:0001016;1.31e-16;83!UBERON:0002420;1.81e-10;9!UBERON:0007245;1.81e-10;9!UBERON:0010009;1.81e-10;9!UBERON:0010011;1.81e-10;9!UBERON:0000454;1.81e-10;9!UBERON:0000125;5.51e-10;9!UBERON:0002308;5.51e-10;9!UBERON:0007023;6.41e-09;114!UBERON:0001871;1.92e-08;6!UBERON:0009663;3.28e-08;7!UBERON:0000200;6.10e-08;6!UBERON:0000349;4.01e-07;5!UBERON:0002021;4.41e-07;5!UBERON:0004733;7.81e-07;12!UBERON:0002028;7.81e-07;12!UBERON:0001872;8.52e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.30e-50,81;UBERON:0001049,3.19e-48,56;UBERON:0005068,3.19e-48,56;UBERON:0006241,3.19e-48,56;UBERON:0007135,3.19e-48,56;UBERON:0001016,3.44e-47,89;UBERON:0000073,9.73e-46,53;UBERON:0002616,9.73e-46,53;UBERON:0002780,8.81e-41,41;UBERON:0001890,8.81e-41,41;UBERON:0003080,8.81e-41,41;UBERON:0006240,8.81e-41,41;UBERON:0000955,4.99e-40,68;UBERON:0006238,4.99e-40,68;UBERON:0001893,7.58e-36,34;UBERON:0003528,8.65e-36,34;UBERON:0002020,8.65e-36,34;UBERON:0001869,8.86e-35,32;UBERON:0002791,5.93e-34,32;UBERON:0003075,5.23e-32,82;UBERON:0007284,5.23e-32,82;UBERON:0002346,1.72e-29,86;UBERON:0003056,3.63e-28,61;UBERON:0000956,2.95e-27,25;UBERON:0000203,2.95e-27,25;UBERON:0007023,3.29e-27,114;UBERON:0002619,1.98e-25,22;UBERON:0010371,1.12e-23,104;UBERON:0001950,3.44e-23,20;UBERON:0004121,1.96e-18,171;UBERON:0000924,1.96e-18,171;UBERON:0006601,1.96e-18,171;UBERON:0011216,1.88e-16,223;UBERON:0010314,2.39e-14,132;UBERON:0002420,2.22e-10,9;UBERON:0007245,2.22e-10,9;UBERON:0010009,2.22e-10,9;UBERON:0010011,2.22e-10,9;UBERON:0000454,2.22e-10,9;UBERON:0000125,6.90e-10,9;UBERON:0002308,6.90e-10,9;UBERON:0003076,5.36e-09,15;UBERON:0003057,5.36e-09,15;UBERON:0001871,2.23e-08,6;UBERON:0009663,4.02e-08,7;UBERON:0000200,6.11e-08,6;UBERON:0000025,1.49e-07,192;UBERON:0000349,4.03e-07,5;UBERON:0002021,4.48e-07,5;UBERON:0004733,8.25e-07,12;UBERON:0002028,8.25e-07,12;UBERON:0007277,8.25e-07,12;UBERON:0001872,8.66e-07,5|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,2.0036519099174,3.28498620174922,4.14290710662849,0,0.0821005894499457,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0.651032612147555,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,4.36910889009705,5.33705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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22866 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19701 | |||
|TSSclassifier=S | |||
|UniProt=B7ZLJ1,B4DGR4,B3KPN2,Q8WXI2 | |||
|association_with_transcript=0bp_to_ENST00000425654,ENST00000543067,NM_001168647,NM_001168648,NM_001168649,NM_014927_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_CNKSR2_5end | |||
|id=chrX:21392529..21392549,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.33e-07!53;CL:0000051!3.33e-07!53;CL:0000838!7.47e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.94e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.74e-09,53;CL:0000051,4.74e-09,53;CL:0000047,1.32e-08,8;CL:0000236,1.34e-08,14;CL:0000838,1.46e-08,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.75e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@CNKSR2 | |||
}} |
Revision as of 11:34, 14 September 2013
Short description: | p1@CNKSR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CNKSR2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000425654, ENST00000543067, NM_001168647, NM_001168648, NM_001168649, NM_014927_5end |
EntrezGene: | CNKSR2 |
HGNC: | 19701 |
UniProt: | B7ZLJ1B4DGR4B3KPN2Q8WXI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.74e-09 | 53 |
common lymphoid progenitor | 4.74e-09 | 53 |
neuronal stem cell | 1.32e-08 | 8 |
B cell | 1.34e-08 | 14 |
lymphoid lineage restricted progenitor cell | 1.46e-08 | 52 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.