FFCP PHASE1:Hg19::chr17:47288061..47288080,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51225 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29859 | |||
|TSSclassifier=weak | |||
|UniProt=Q9P2A4 | |||
|association_with_transcript=288bp_to_ENST00000419580_5end | |||
|description=CAGE_peak_1_at_ABI3_5end | |||
|id=chr17:47288061..47288080,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.56e-43!119;CL:0000738!4.80e-43!140;CL:0002031!7.16e-39!124;CL:0000037!1.44e-37!172;CL:0000566!1.44e-37!172;CL:0002032!3.03e-36!165;CL:0000837!3.03e-36!165;CL:0000988!9.03e-35!182;CL:0002057!9.90e-24!42;CL:0002009!4.01e-22!65;CL:0002194!5.48e-21!63;CL:0000576!5.48e-21!63;CL:0000040!5.48e-21!63;CL:0000559!5.48e-21!63;CL:0000860!1.26e-20!45;CL:0000557!2.54e-20!71;CL:0000542!7.60e-20!53;CL:0000051!7.60e-20!53;CL:0000766!1.17e-19!76;CL:0000838!1.54e-19!52;CL:0000839!9.34e-18!70;CL:0000763!1.06e-16!112;CL:0000049!1.06e-16!112;CL:0000115!5.68e-12!35;CL:0000945!8.98e-10!24;CL:0000826!8.98e-10!24;CL:0000791!1.01e-09!18;CL:0000789!1.01e-09!18;CL:0002420!1.01e-09!18;CL:0002419!1.01e-09!18;CL:0000790!1.01e-09!18;CL:0000084!3.08e-09!25;CL:0000827!3.08e-09!25;CL:0002139!3.63e-09!24;CL:0000625!1.92e-08!11;CL:0000071!2.03e-08!18;CL:0002546!2.03e-08!18;CL:0002393!1.48e-07!9;CL:0002397!1.48e-07!9;CL:0002078!2.63e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.90e-18;33!CL:0002057;7.90e-18;33!CL:0000576;6.38e-17;48!CL:0000473;1.16e-16;39!CL:0000234;1.16e-16;39!CL:0002087;1.28e-14;104!CL:0000542;2.50e-12;53!CL:0000115;4.01e-11;36!CL:0000738;7.91e-11;136!CL:0000945;1.54e-10;24!CL:0000791;1.77e-10;18!CL:0000789;1.77e-10;18!CL:0002419;1.77e-10;18!CL:0000766;1.91e-10;69!CL:0000084;3.61e-10;25!CL:0002139;5.32e-10;24!CL:0000071;3.82e-09;18!CL:0000625;3.83e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.72e-52,115;CL:0000738,5.64e-49,136;CL:0002031,5.33e-45,120;CL:0000037,3.39e-43,168;CL:0002032,1.16e-41,161;CL:0000837,1.16e-41,161;CL:0000988,3.15e-38,177;CL:0000473,3.73e-28,48;CL:0000234,3.73e-28,48;CL:0002009,7.72e-28,61;CL:0002194,1.57e-26,59;CL:0000576,1.57e-26,59;CL:0000040,1.57e-26,59;CL:0000559,1.57e-26,59;CL:0000860,5.08e-26,42;CL:0002057,5.08e-26,42;CL:0000557,5.06e-24,67;CL:0000766,1.03e-22,72;CL:0000542,6.19e-22,53;CL:0000051,6.19e-22,53;CL:0000838,1.35e-21,52;CL:0000839,3.43e-21,66;CL:0000763,1.67e-19,108;CL:0000049,1.67e-19,108;CL:0000115,1.22e-12,36;CL:0000945,1.28e-10,24;CL:0000826,1.28e-10,24;CL:0000791,1.46e-10,18;CL:0000789,1.46e-10,18;CL:0002420,1.46e-10,18;CL:0002419,1.46e-10,18;CL:0000790,1.46e-10,18;CL:0000084,3.22e-10,25;CL:0000827,3.22e-10,25;CL:0002139,5.98e-10,24;CL:0000625,3.75e-09,11;CL:0000071,3.98e-09,18;CL:0002546,3.98e-09,18;CL:0002393,3.54e-08,9;CL:0002397,3.54e-08,9;CL:0002078,8.60e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002057;7.16e-19;42!CL:0000051;2.50e-12;53!CL:0000790;1.77e-10;18!CL:0002546;3.82e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.33e-31!115;UBERON:0002193!3.70e-26!112;UBERON:0002390!4.88e-25!102;UBERON:0003061!4.88e-25!102;UBERON:0002405!5.07e-18!115;UBERON:0002371!1.42e-16!80;UBERON:0001474!1.34e-13!86;UBERON:0003081!1.39e-11!216;UBERON:0001049!1.66e-11!57;UBERON:0005068!1.66e-11!57;UBERON:0006241!1.66e-11!57;UBERON:0007135!1.66e-11!57;UBERON:0004765!6.84e-10!101;UBERON:0001434!6.84e-10!101;UBERON:0001986!2.03e-08!18;UBERON:0004638!2.03e-08!18;UBERON:0004852!2.03e-08!18;UBERON:0002616!3.35e-08!59;UBERON:0003080!4.57e-08!42;UBERON:0002780!5.67e-08!41;UBERON:0001890!5.67e-08!41;UBERON:0006240!5.67e-08!41;UBERON:0003075!1.14e-07!86;UBERON:0007284!1.14e-07!86;UBERON:0002346!3.01e-07!90;UBERON:0002020!9.85e-07!34;UBERON:0003528!9.85e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.82e-09;18!UBERON:0001986;3.82e-09;18!UBERON:0004852;3.82e-09;18!UBERON:0007023;1.03e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.61e-33,114;UBERON:0002193,1.30e-30,108;UBERON:0002390,2.82e-29,98;UBERON:0003061,2.82e-29,98;UBERON:0002405,7.95e-25,93;UBERON:0002371,1.81e-19,76;UBERON:0001474,2.51e-16,82;UBERON:0003081,1.09e-15,203;UBERON:0004765,6.46e-13,90;UBERON:0001049,3.51e-10,56;UBERON:0005068,3.51e-10,56;UBERON:0006241,3.51e-10,56;UBERON:0007135,3.51e-10,56;UBERON:0001434,4.78e-10,100;UBERON:0004638,3.98e-09,18;UBERON:0001986,3.98e-09,18;UBERON:0004852,3.98e-09,18;UBERON:0000073,4.62e-09,53;UBERON:0002616,4.62e-09,53;UBERON:0002780,1.20e-07,41;UBERON:0001890,1.20e-07,41;UBERON:0003080,1.20e-07,41;UBERON:0006240,1.20e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0,81.6859307445599,72.4948204843021,71.5481002141344,34.6160563627036,24.1812520801244,32.2017536497438,0,0,0,29.6699378222555,36.8218312142422,1.17440175733939,17.1738576644882,16.4446446925516,20.6160327180059,47.0222495903841,39.5150272543155,57.954502717692,68.0463757488363,83.1327076115381,120.806862471532,12.7835970298127,27.1370806094405,20.4406204790768,15.8230815777183,39.9610702185397,26.9589742072987,7.92915065694223,14.2006630388442,14.8969135253776,28.2363509313907,37.115236407867,32.8096287289824,16.2224462956578,31.7719736805333,24.2948107803636,61.6821931349159,106.912520485195,109.965985637435,3.19230162491442,7.37600792098482,8.09668923694247,22.8636285383636,40.1541847183555,35.6189705316391,6.05399502633369,12.5214396235772,7.27863491114034,191.186034112307,148.82300997553,144.664465400779,26.5095569505728,14.5671586056261,19.6085215770438,204.924162749958,196.927510427099,204.035859755096,8.79981222306614,6.55366333514558,8.89509253863555,5.54749289336459,8.80871171479227,9.19603903927173,9.25462821898807,13.3567525634951,3.98449078376614,2.34894875748376,1.91136614062614,0,10.0891541336676,2.37045676297569,3.73748563216283,5.50215067848831,4.93443597598822,12.8733601450822,5.54067853277104,1.89379122293893,7.79306913631645,20.4995240668719,7.9543595018206,2.65840673500345,5.95768500283034,16.7799628840634,15.7371810547453,38.4784696772602,38.1363024544471,37.6744011455568,9.49034004237187,4.28065324943541,8.36284190439814,29.0071917305769,11.8798353016596,7.55980380061786,9.36172860472161,33.4493685040302,41.6693410468108,38.9685338223833,35.5357281023544,40.5717557359506,38.7285252312272,41.909573611791,44.3409118337365,24.9992361598668,28.3486607530518,17.2341040620531,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.614843499851882,10.4128365020682,0,0,19.472843619281,28.034887705182,22.2039794066505,0.238490624305342,1.71598473234038,1.11437250398869,5.16782259153433,13.763753521698,12.4970580578734,14.6980064900242,20.5554723742854,12.6554299292431,10.0317583937669,14.7297552726517,9.24992282985447,2.67776490211736,12.0848795132744,9.12326526862215,5.85748938115607,17.2801647762558,12.9622711661082,14.9130546234413,13.0227036123178,13.625989138482,26.0638283692002,35.1228294040208,22.3506127595097,2.63560834872127,7.75560528296651,0,0,0,0,0,0.709336764396714,0,0,0,0,0.404132016209064,0,0,0,0,0,2.85235910772225,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0.625592599359821,0,0.877955241761676,0,0,0.113432183160021,0.538168907066586,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.609868530647977,0.927708378250397,0.69716365721711,0.414644220061482,2.01856680700503,1.09493207722749,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,14.0249536378683,11.2193419042757,0.4115740113314,0,2.53510069643662,6.87979051674338,8.86184860022106,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,2.16549671641611,4.1668696131895,2.47330397904978,0,0,11.0797652739329,1.40402559083543,10.404181360211,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,1.68196626518041,1.74384027533312,1.68678057388185,0,3.57656445851882,0,0,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0,0,0,0,0,13.378615870531,28.6286542116312,16.8667151586425,0,0,0,0,0,0,27.2366899904271,32.3130446731161,38.8129634747131,37.9895387388055,0,1.30139853857622,0,2.01019518401218,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979005787313703,0.343143423810856,22.3309468212718,30.1999881146064,35.6470043063504,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0,0,0,0,35.2573490619779,33.6785536447501,8.63663664408557,13.880452742126,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,7.21287081534056,0,0,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0,0.107420244868274,0.145016693914229,0.596586391912706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27281299170375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16876448669825,0.281695602532241,0,0,0,0,0.633322905892992,0,0.379473173765715,0.349934720244983,0,0.670302275535787,0,6.21349085126742,0,0,0,0,32.4766469908588,29.0562138714103,29.6216537330565,32.3995214622593,44.0157632202228,29.1812990036723,27.5416032991439,42.8287595198906,0,0,0,8.9185524060345,4.61661481524624,0,4.62336190913585,16.9642465717894,76.6021480529467,17.7805809488062,0,1.12318871245384,17.3458356065226,0.94007937463814,5.01268954180134,9.14175600128658,5.29940647842208,8.87918711640609,2.12923118845163,3.09154810280188,0,0,0,6.25241905286529,0,0,0,0,0,0,6.59286806723523,0,7.80103689942349,0,0,0.890894042497916,0,4.97073823883149,19.1310406318297,0,7.25137046597742,0,6.17668763578316,38.6797481743607,0,0,18.9550600410047,0,0,0,1.02314474045374,4.04437963111428,47.896618469388,0,4.84666373047609,11.5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| |||
|short_description=p1@ABI3 | |||
}} |
Revision as of 16:05, 20 January 2014
Short description: | p1@ABI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABI3_5end |
Coexpression cluster: | NA |
Association with transcript: | 288bp_to_ENST00000419580_5end |
EntrezGene: | ABI3 |
HGNC: | 29859 |
UniProt: | Q9P2A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.61e-33 | 114 |
hemolymphoid system | 1.30e-30 | 108 |
hematopoietic system | 2.82e-29 | 98 |
blood island | 2.82e-29 | 98 |
immune system | 7.95e-25 | 93 |
bone marrow | 1.81e-19 | 76 |
bone element | 2.51e-16 | 82 |
lateral plate mesoderm | 1.09e-15 | 203 |
skeletal element | 6.46e-13 | 90 |
neural tube | 3.51e-10 | 56 |
neural rod | 3.51e-10 | 56 |
future spinal cord | 3.51e-10 | 56 |
neural keel | 3.51e-10 | 56 |
skeletal system | 4.78e-10 | 100 |
blood vessel endothelium | 3.98e-09 | 18 |
endothelium | 3.98e-09 | 18 |
cardiovascular system endothelium | 3.98e-09 | 18 |
regional part of nervous system | 4.62e-09 | 53 |
regional part of brain | 4.62e-09 | 53 |
regional part of forebrain | 1.20e-07 | 41 |
forebrain | 1.20e-07 | 41 |
anterior neural tube | 1.20e-07 | 41 |
future forebrain | 1.20e-07 | 41 |