FFCP PHASE1:Hg19::chr17:74533781..74533800,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114757 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16505 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WWM9 | |||
|association_with_transcript=0bp_to_ENST00000293230,NM_134268,uc002jru.1_5end | |||
|coexpression_cluster_id=C1231 | |||
|description=CAGE_peak_1_at_CYGB_5end | |||
|id=chr17:74533781..74533800,- | |||
|ontology_enrichment_celltype=CL:0000055!4.17e-20!180;CL:0000183!9.05e-14!59;CL:0000680!6.57e-13!57;CL:0000056!6.57e-13!57;CL:0000355!6.57e-13!57;CL:0000187!3.36e-12!54;CL:0000393!1.73e-10!60;CL:0000211!1.73e-10!60;CL:0000325!2.44e-09!39;CL:0000192!2.87e-08!42;CL:0000514!2.87e-08!42;CL:0000220!5.83e-08!246;CL:0002321!7.11e-08!248;CL:0000057!1.03e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000187;8.39e-08;55!CL:0000393;8.86e-07;61!CL:0000211;8.86e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.63e-13,58;CL:0000056,2.63e-13,58;CL:0000355,2.63e-13,58;CL:0000187,1.45e-12,55;CL:0000393,1.17e-10,61;CL:0000211,1.17e-10,61;CL:0000192,1.79e-08,43;CL:0000514,1.79e-08,43;CL:0000057,1.03e-07,76;CL:0002321,4.52e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000355;5.24e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.58e-21!365;UBERON:0000119!1.07e-19!312;UBERON:0000481!3.64e-19!347;UBERON:0000483!7.66e-19!309;UBERON:0005256!1.00e-17!143;UBERON:0000486!1.36e-17!82;UBERON:0000914!1.33e-16!83;UBERON:0002329!1.33e-16!83;UBERON:0003077!1.33e-16!83;UBERON:0003059!1.33e-16!83;UBERON:0007282!1.33e-16!83;UBERON:0009618!1.33e-16!83;UBERON:0007285!1.33e-16!83;UBERON:0000468!8.88e-16!659;UBERON:0004290!2.44e-14!70;UBERON:0002385!2.92e-14!63;UBERON:0001015!2.92e-14!63;UBERON:0000383!2.92e-14!63;UBERON:0002100!3.14e-14!216;UBERON:0001134!1.18e-13!61;UBERON:0002036!1.18e-13!61;UBERON:0003082!1.18e-13!61;UBERON:0003103!8.80e-13!69;UBERON:0000922!9.87e-12!612;UBERON:0000467!1.85e-11!625;UBERON:0000480!3.16e-11!626;UBERON:0002050!4.79e-11!605;UBERON:0005423!4.79e-11!605;UBERON:0000923!5.49e-11!604;UBERON:0005291!5.49e-11!604;UBERON:0006598!5.49e-11!604;UBERON:0002532!5.49e-11!604;UBERON:0007100!1.19e-10!27;UBERON:0000477!1.56e-10!286;UBERON:0003104!9.73e-10!238;UBERON:0009142!9.73e-10!238;UBERON:0000948!1.03e-09!24;UBERON:0005498!1.03e-09!24;UBERON:0004140!1.03e-09!24;UBERON:0009881!1.03e-09!24;UBERON:0004141!1.03e-09!24;UBERON:0003084!1.03e-09!24;UBERON:0007005!1.03e-09!24;UBERON:0004139!1.03e-09!24;UBERON:0004291!1.03e-09!24;UBERON:0004111!4.27e-09!241;UBERON:0000064!1.49e-07!219;UBERON:0000479!1.92e-07!787;UBERON:0003102!1.98e-07!95;UBERON:0000490!3.01e-07!138;UBERON:0003914!9.23e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.46e-10;25!UBERON:0000948;4.29e-09;22!UBERON:0002385;1.10e-07;31!UBERON:0001015;1.10e-07;31!UBERON:0000383;1.10e-07;31!UBERON:0001013;7.77e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.63e-18,83;UBERON:0000119,5.31e-18,309;UBERON:0000483,3.65e-17,306;UBERON:0003104,3.47e-16,160;UBERON:0009142,3.47e-16,160;UBERON:0007503,3.99e-16,78;UBERON:0002329,8.01e-15,71;UBERON:0003059,8.01e-15,71;UBERON:0007282,8.01e-15,71;UBERON:0004290,8.01e-15,71;UBERON:0009618,8.01e-15,71;UBERON:0002385,1.01e-14,64;UBERON:0001015,1.01e-14,64;UBERON:0000383,1.01e-14,64;UBERON:0003077,1.22e-14,72;UBERON:0007285,1.22e-14,72;UBERON:0007524,1.98e-14,73;UBERON:0005256,4.14e-14,122;UBERON:0001134,4.32e-14,62;UBERON:0002036,4.32e-14,62;UBERON:0003082,4.32e-14,62;UBERON:0002100,4.25e-13,199;UBERON:0003103,1.26e-12,68;UBERON:0007100,4.33e-11,27;UBERON:0005423,1.59e-10,581;UBERON:0000922,2.95e-10,592;UBERON:0000948,4.16e-10,24;UBERON:0005498,4.16e-10,24;UBERON:0004140,4.16e-10,24;UBERON:0009881,4.16e-10,24;UBERON:0004141,4.16e-10,24;UBERON:0003084,4.16e-10,24;UBERON:0007005,4.16e-10,24;UBERON:0004139,4.16e-10,24;UBERON:0004291,4.16e-10,24;UBERON:0002050,6.74e-10,564;UBERON:0010314,3.20e-09,132;UBERON:0000923,7.24e-09,560;UBERON:0010316,7.24e-09,560;UBERON:0005291,7.24e-09,560;UBERON:0006598,7.24e-09,560;UBERON:0010317,7.24e-09,560;UBERON:0002532,7.24e-09,560;UBERON:0000479,1.88e-08,773;UBERON:0003102,4.87e-08,99;UBERON:0000490,1.63e-07,148;UBERON:0004111,5.36e-07,240;UBERON:0001013,8.56e-07,14 | |||
|phase1_expression=242.540636326193,61.6609508806031,69.4905212193138,30.0219895059391,35.756887554183,32.2765253917136,5.06599756336621,34.7445930384757,21.1560358841869,51.1126587923138,30.0054502228144,2.18441372130172,21.3651252365047,26.2384668275299,27.505982185417,5.3786011716142,3.01347264011988,2.92124036154949,3.90346239032406,20.9305798730539,27.5400933179742,0.940364164434263,0.286235987131057,1.23186982565596,1.88313959392204,0,0,0,0,0,2.78669021968937,139.752026120797,155.422254089577,25.1432726913416,0,0,21.4328320714438,0.553995408531877,0,0,5.37397138175818,10.0407036465884,2.83333124397605,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,1.17447437874188,2.6759125968766,1.32171328579026,1.68152568894461,10.271979306228,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.267440195783507,1.01377082717959,260.873346955939,215.965676824571,60.0954040664593,2.89151321907653,7.52006865953834,9.12533069453189,11.9292892057665,6.8128881842369,12.1949914141648,20.1773751690933,6.14843499851882,13.4908447762644,44.8083204599827,7.04490441290416,9.7364218096405,8.70648686496336,5.31831842075461,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,1.10047216776027,0.417989933073621,0.516833518338658,0.71153252537342,0,1.61131726843659,0,21.9655851793353,0,0.81014194788176,0.446498641420399,0.22452937262617,0.450445921933289,0,0,0.366403487860815,0,0,40.9928409013982,18.3879622127268,3.79891534993739,2.38336525463794,6.3104056564739,9.57604631935564,9.53151920241922,3.20246987189115,6.66002380726332,79.6700250623402,50.112370009924,111.644479826492,134.556753176344,120.9969441408,11.0131072961884,20.6025650708012,17.6846264678779,9.41526687476347,1.17434498643765,1.94247533241758,1.82586048712923,0.204154171254893,45.5715317226659,0.723280468230358,7.12801714369232,9.39614331258516,90.1059748318646,193.308280148568,12.9618807744631,25.6492965737527,1.38532057742091,2.63386572528503,4.29082914118628,24.1883274839621,71.3488432076532,2.87023417102179,3.41691822109708,8.26534414522291,1.20036438433761,1.8549455262919,5.92573242104947,9.67807652924267,0.675105328965065,3.31285817548075,2.27190396819703,3.03764665519588,5.01102776138317,2.4850671476163,1.30977727695932,2.88253006927829,425.56039866558,205.105082684308,312.043399783236,1.82960559194393,0.795178609928912,8.01738205799677,3.73179798055334,6.05570042101508,0,9.38697193978896,18.0107462694008,35.9150795516449,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0.134831308160164,0,0,6.64339909162183,75.7305578538607,26.3407367252096,58.8034845542168,2.53510069643662,1.96565443335525,8.86184860022106,0,0,78.5780571167247,404.100550874559,46.084718835624,1.00528972411631,52.4976484048863,34.8614886682047,49.9168696934198,72.1656710126366,11.8249013074578,5.16598254637615,8.22888752238121,13.4265798647217,1.33177906564219,0,0,0,5.6161023633417,1.48631162288728,525.846808665819,190.491733377507,229.250332240939,0.0895585227028483,0.871901815541886,2.30029607499127,0,0,0.621984346622316,0.720599767084807,1.00993946741104,121.725463358088,551.973274931711,627.113342573751,682.579059630594,278.970987704117,86.7991437168921,541.641089834946,42.273418798201,10.0270815831654,41.3627932030158,3.23179289394444,296.854850057062,76.07724773004,9.57377219705534,5.2003718455683,15.1752350814664,1.41849132023278,12.5218424137567,241.775787275928,37.983512377401,16.4648067356154,70.3590158074468,205.416546373191,27.71831555267,0,0,0.199945982364114,0,0,4.21667878966063,8.38686994220539,2.29723871668228,1.42636905040718,8.54209709338717,24.2462060609452,32.589095309661,0,0.197030760201927,0.215627574859517,0.256686072559497,14.7374882049029,6.50699269288109,3.09315525111078,1.34013012267479,0,0,0,0,35.089766631674,48.5165405427887,67.5449909012342,0.623912584592421,0,0,0.117141414992713,36.7154241667817,113.703752027992,81.7437263210789,5.31380478828349,8.48098175291834,7.12445638638279,144.109651892577,89.2172901908225,0.206768026122887,0.215714200818617,0,3.63753085735511,43.2732142727292,1.20956117331872,208.410558567773,34.9893299096782,85.3206687076544,223.987232898965,47.5887741632034,51.9558165293852,77.1773945513953,5.5515489768956,37.8206474916961,18.067974323038,25.9627214591811,22.4286030427721,0,269.881709028221,1.38121483403844,118.14406716138,73.0185583706935,124.305945381534,13.0847887743149,23.1816164684288,25.8835423828362,11.6911379722609,12.771747096038,4.54933536283586,1.87103075804167,12.0912913017198,13.880452742126,40.6419656315779,32.6098353005655,18.8608442053328,17.4525961875032,30.2230918874941,0,0,1.02580050046556,0.328014645699706,3.57916234130733,9.17065003664728,0.183138929636687,0.247528499761764,348.00491602568,111.160302072245,12.8547143875328,29.4845690790972,28.6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| |||
|short_description=p1@CYGB | |||
}} |
Revision as of 17:28, 20 January 2014
Short description: | p1@CYGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYGB_5end |
Coexpression cluster: | C1231_Melanocyte_Mallassezderived_Gingival_Keratinocyte_melanoma_Sebocyte_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000293230, NM_134268, uc002jru.1_5end |
EntrezGene: | CYGB |
HGNC: | 16505 |
UniProt: | Q8WWM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.63e-13 | 58 |
myoblast | 2.63e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.63e-13 | 58 |
muscle cell | 1.45e-12 | 55 |
electrically responsive cell | 1.17e-10 | 61 |
electrically active cell | 1.17e-10 | 61 |
smooth muscle cell | 1.79e-08 | 43 |
smooth muscle myoblast | 1.79e-08 | 43 |
fibroblast | 1.03e-07 | 76 |
embryonic cell | 4.52e-07 | 250 |