FFCP PHASE1:Hg19::chr5:39219641..39219683,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2533 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4036 | |||
|TSSclassifier=strong | |||
|UniProt=E9PBV9,D6RAE8,D6RC38,F5H8I8,B4DLN2,Q9NZI9,O15117,Q05DE9 | |||
|association_with_transcript=0bp_to_ENST00000504542,ENST00000505428,ENST00000506557,ENST00000509072,ENST00000542542,NM_001465,NM_199335,uc003jlt.2,uc003jlu.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_FYB_5end | |||
|id=chr5:39219641..39219683,- | |||
|ontology_enrichment_celltype=CL:0000766!4.12e-33!76;CL:0002009!1.82e-31!65;CL:0000763!1.86e-31!112;CL:0000049!1.86e-31!112;CL:0002194!2.70e-31!63;CL:0000576!2.70e-31!63;CL:0000040!2.70e-31!63;CL:0000559!2.70e-31!63;CL:0002057!9.31e-29!42;CL:0000557!4.59e-28!71;CL:0000839!1.50e-26!70;CL:0000860!9.23e-26!45;CL:0000037!4.35e-22!172;CL:0000566!4.35e-22!172;CL:0002032!1.68e-20!165;CL:0000837!1.68e-20!165;CL:0000738!9.40e-20!140;CL:0000988!3.80e-18!182;CL:0002087!2.09e-17!119;CL:0002031!6.66e-15!124;CL:0002393!4.09e-07!9;CL:0002397!4.09e-07!9;CL:0000094!6.05e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.35e-24;33!CL:0002057;4.35e-24;33!CL:0000473;7.34e-24;39!CL:0000234;7.34e-24;39!CL:0000576;1.10e-23;48!CL:0000766;1.33e-17;69!CL:0000763;8.77e-12;100!CL:0000094;8.44e-08;8!CL:0002087;8.07e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.61e-42,72;CL:0002009,6.71e-41,61;CL:0002194,8.49e-41,59;CL:0000576,8.49e-41,59;CL:0000040,8.49e-41,59;CL:0000559,8.49e-41,59;CL:0000473,1.69e-37,48;CL:0000234,1.69e-37,48;CL:0000557,8.69e-36,67;CL:0000763,1.10e-34,108;CL:0000049,1.10e-34,108;CL:0000839,2.02e-33,66;CL:0000860,4.55e-33,42;CL:0002057,4.55e-33,42;CL:0000037,1.58e-24,168;CL:0000738,3.89e-24,136;CL:0002032,1.31e-22,161;CL:0000837,1.31e-22,161;CL:0002087,2.23e-22,115;CL:0000988,3.09e-21,177;CL:0002031,1.58e-18,120;CL:0002393,5.38e-08,9;CL:0002397,5.38e-08,9;CL:0000094,8.47e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.81e-24;42!CL:0000049;6.24e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-40!115;UBERON:0002390!7.88e-28!102;UBERON:0003061!7.88e-28!102;UBERON:0002193!1.05e-23!112;UBERON:0002371!1.45e-22!80;UBERON:0001474!1.43e-19!86;UBERON:0004765!2.43e-16!101;UBERON:0001434!2.43e-16!101;UBERON:0001049!2.12e-15!57;UBERON:0005068!2.12e-15!57;UBERON:0006241!2.12e-15!57;UBERON:0007135!2.12e-15!57;UBERON:0002405!4.32e-15!115;UBERON:0003080!1.20e-12!42;UBERON:0002780!2.01e-12!41;UBERON:0001890!2.01e-12!41;UBERON:0006240!2.01e-12!41;UBERON:0002616!3.26e-11!59;UBERON:0002020!4.65e-10!34;UBERON:0003528!4.65e-10!34;UBERON:0001893!6.86e-10!34;UBERON:0000062!6.97e-10!511;UBERON:0002791!1.36e-09!33;UBERON:0001869!5.41e-09!32;UBERON:0000955!1.05e-08!69;UBERON:0006238!1.05e-08!69;UBERON:0002619!2.72e-08!22;UBERON:0003075!4.30e-08!86;UBERON:0007284!4.30e-08!86;UBERON:0001017!7.34e-08!82;UBERON:0001950!2.18e-07!20;UBERON:0005743!3.45e-07!86;UBERON:0002346!6.87e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.67e-12;114!UBERON:0002780;9.68e-11;41!UBERON:0001890;9.68e-11;41!UBERON:0003528;5.59e-10;34!UBERON:0002020;5.59e-10;34!UBERON:0000073;6.85e-10;53!UBERON:0002616;6.85e-10;53!UBERON:0001893;6.91e-10;34!UBERON:0002791;1.15e-09;32!UBERON:0001869;1.78e-09;32!UBERON:0002619;2.55e-09;22!UBERON:0001950;2.84e-08;20!UBERON:0000178;1.15e-07;15!UBERON:0000179;1.15e-07;15!UBERON:0000463;1.15e-07;15!UBERON:0000956;2.15e-07;25!UBERON:0000203;2.15e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.78e-46,114;UBERON:0002390,5.23e-36,98;UBERON:0003061,5.23e-36,98;UBERON:0002193,1.05e-31,108;UBERON:0002371,4.54e-29,76;UBERON:0001474,7.72e-26,82;UBERON:0002405,4.90e-25,93;UBERON:0004765,1.92e-22,90;UBERON:0001434,1.82e-19,100;UBERON:0001049,3.94e-18,56;UBERON:0005068,3.94e-18,56;UBERON:0006241,3.94e-18,56;UBERON:0007135,3.94e-18,56;UBERON:0000073,1.34e-16,53;UBERON:0002616,1.34e-16,53;UBERON:0002780,1.49e-14,41;UBERON:0001890,1.49e-14,41;UBERON:0003080,1.49e-14,41;UBERON:0006240,1.49e-14,41;UBERON:0003528,8.35e-12,34;UBERON:0002020,8.35e-12,34;UBERON:0001893,1.32e-11,34;UBERON:0000955,6.87e-11,68;UBERON:0006238,6.87e-11,68;UBERON:0002791,9.16e-11,32;UBERON:0001869,1.48e-10,32;UBERON:0003075,2.10e-10,82;UBERON:0007284,2.10e-10,82;UBERON:0001017,2.41e-10,81;UBERON:0002619,2.35e-09,22;UBERON:0002346,3.85e-09,86;UBERON:0003081,4.71e-09,203;UBERON:0001950,2.61e-08,20;UBERON:0001016,4.55e-08,89;UBERON:0000178,1.16e-07,15;UBERON:0000179,1.16e-07,15;UBERON:0000463,1.16e-07,15;UBERON:0003056,1.58e-07,61;UBERON:0000956,2.02e-07,25;UBERON:0000203,2.02e-07,25;UBERON:0010371,3.94e-07,104 | |||
|phase1_expression=0.54503513781167,4.28201047781966,1.26858963686374,1.0007329835313,1.78784437770915,0,2.53299878168311,0,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0.990130823680373,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,67.6586556180115,63.7156800841373,85.9229484404222,4.59710612239464,0,1.10926203050036,0,0,4.11040615068786,122.432985285545,136.370224279696,85.0682613206139,261.757189386472,215.065394236602,333.302784518637,392.284448227266,295.498987964649,392.258426940699,196.634965222209,94.9797821330418,90.1245539304751,560.424780243549,441.108736643111,506.071971961572,110.663363516455,67.7758917763017,85.3186865544353,185.04221977038,128.265890527188,137.755495964837,112.944956284863,103.339146718502,106.129962882641,1137.65713434398,949.247546621346,1158.05264719733,93.447374838404,48.2277440987469,77.8527811244469,411.545313690545,354.608384525737,462.395050377193,138.031086600408,89.4914655449782,143.04099912328,227.521943357961,191.131265668574,151.792859348064,337.547536595218,315.671828752846,608.989247995237,96.6193201282833,154.757174860892,117.45305087066,1.75996244461323,7.64594055766984,1.77901850772711,9.81479511902967,1.60158394814405,3.4485146397269,7.27149360063348,4.77026877267682,0,5.28513470433845,0.764546456250458,1.32171328579026,6.1655941927969,4.21414535640123,0.590129310341499,0,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,4.77848121486145,1.95325036156926,1.90090408889675,20.9299415518104,8.83107616965487,12.4930726552346,26.0454977248419,6.56902397536837,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0.144846518960824,3.1811437882044,7.29952305453954,0,0,0.614843499851882,9.16853528483989,1.09288586487763,0,29.5338128225762,33.25877982416,35.1009015769804,3.81584998888547,7.43593384014166,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,660.219891354677,946.183844521914,1.3082821564276,0,0.12663051166458,0.662045904066094,0.286836620748814,2.83734705758686,0,1.06748995729705,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,3.0623125688234,0,1.34323515528495,0,0,0,0,0,0,1.38532057742091,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0,0,0,0,0,10.2428252176547,0.818238361772504,9.75135624322613,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0.435758888184812,0,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,0,3.80265104465493,7.86261773342101,7.68026878685825,0,0.491953754172454,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,208.545804156026,156.54885337815,158.738081324362,1.87467667973554,0.16798212819886,2.26840155587818,0.626909658919938,3.48760726216754,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.0819878693,108.989788840771,101.200290951855,0,0,0,0,0,0,0,5.12279976525011,0.215627574859517,3.7219480521127,0,0,0,2.17771144934653,0,1641.82339649222,999.199273741443,2553.62839379285,0.736148950314839,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0,0,131.504464614156,112.171384425681,74.8160180202145,0,0,0,0,0.61384789315225,0.841980283299221,0.128139149255701,0,0,0,0,0,0,0,0,0.483437798366489,32.0810352485256,0.828728900423067,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,44.513717031816,0,0,0,1.30012049207304,0,0,0,0,0,0,0.145016693914229,0.340906509664404,0,0.991709492165869,0.192190067365106,0.510450849978337,0.2023155617111,0.464845549297286,0.62962469366128,0,2.46426864140871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,2.19342140668156,0,0,0,0,0,0,0,0,0,0,2.78841148289775,0,0,0,0,0,1.89996871767898,0,0,0.349934720244983,1.34710957815717,0,0,40.8584095371222,0,0,0.443430153536676,0,427.778334582719,455.723775456856,399.322678209088,337.097962272771,364.055611681282,620.588958811431,502.229236631447,308.525693578471,0,0,55.3790888117132,0,0,0,0,1.1974762285969,4.78763425330917,2.96343015813436,6.49243880549111,4.7735520279288,9.35762184036088,25.0687833236837,22.557102938106,15.4055517799459,0.963528450622197,2.21979677910152,84.7434013003749,20.9538260301016,27.9589095520697,32.6567117522927,37.0405094600437,16.0218238229673,0.278406173895242,1.23087398947712,3.2454681417118,0,0,0,31.2062421849134,0,0,0,0.95497793895076,1.78178808499583,0,31.8127247285215,31.5099492759549,0.779160935160341,0,0,7.17292757703851,29.0098111307705,0,0,0,0,0,0.179021174675609,2.55786185113436,9.37112353550869,174.822657413266,0,3.87733098438087,23.099256442301,3.99227596002388,0,0,7.24999575434793,4.21035758656349,4.06805840468426,1.41832609060762,0,0,0,29.2294657318567,24.239884163707,19.8356257212208,7.1876518955296,4.72876190325676,5.48463492884931,0,0,8.77232946943287,0,437.37972662415,129.87931146094,5.3237212241784,9.25103363222567,11.0833088016253,22.9204953688013,0,2.35470384592537,1.16348177330109,0.451191321234361,0,0.167821586975843,0,0.794682894901893,0,0,0.565412285735763,0,1.99052386215701,8.22655349881054,7.94339188413713,0,0,0,33.3635608254351,5.61804353109152,12.416015623443,0,20.1534557500052,0,5.12959723704208,3.62972148145992,1.53036380815245,46.3157628676817,0,0,5.31723098165748,12.9086862791445,7.53439004177341,10.7525186795663,0.569219092059585,0.138674673013139,0,86.919256506553,11.5788744751935,35.1200603166481,0,0.19351266257817,0,0,7.27417623663146,7.50177076877752,4.06765333404958,0,0,13.4851995386022,0.391102765469606,2.64524106830061,10.0322907527496,0.599428828746391,0,0,0,0,0,0.235694034616795,0,0,0.407992870545287,0,48.6340433854929,82.5539434718718,6.38732940334862,0,0,3.35138881526705,6.41649187232714,7.89660327034495,3.59422200898184,1.28767814440971,12.4976016167449,8.80103489576114,0,0,0.0787831823072236,0.0824158583811665,0.337017719270924,0,0,45.3280923191303,34.4594617462286,0,0,0,4.49947783103001,3.0952078182318,12.8181564548432,29.5182525087354,11.9784675094781,5.19300422536481,0,0,0.575745591958336,18.5820784857075,9.26928758511604,0,0,0,0,1.19730191562487,0.246277562248017,0.170388021785422,0.679872549120754,12.0172831616028,9.27548222385549,41.7583949047808,39.8020131245497,0,24.6685257810835,45.4914377538379,27.0391404771425,21.126191822707,73.9287372499807,0,0,124.476545265185,1.08803560673895,1.5041393641362,1.83807346058077,0.983617892129413,0.628216385000937,9.74674997963685,12.4466790200002,32.800023845103,36.6981885241646,63.7842046336901,35.2086604677644,0,0,0.606596470166591,9.13489067343896,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0,0,0,0,0.591420599958536,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,1.25362188757041,0,0,0.883445729729405,0,0,0,0,0,30.6933728256842,0,0.398594520940089,0.490696182767533,0,6.3900956275967,0.633936370075881,0,12.909699292991,0,0,0,0.279759015438889,4.97661808026378,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5434724733432,18.420554922326,48.3690592943168,6.76884001994492,1.51243017733031,8.16055579077771,13.0795272961799,1.42769420259154,90.2959010209436,4.36487976386639,26.4137181871218,0.577628330751691,0,0,0,11.1311285956901,0,2.34454203369928,256.406653897313,1.80149109261106,16.5598816563091,10.8060135389431,17.9647962681185,29.7628986961705,9.19529247811649,1.64092442705466,15.3512174720011,2.97726707033577,0,14.9482040338326,9.10693120993088,33.2920884996636,6.67662164660295,17.9853131167525,34.8600314739171,0,0.171488009437418,28.8191667821766,7.30077786547625,0,0.889851215136553,15.9340978486543,30.1661932638724,0.280272163313789,5.47895232305697,0.215927591218621,0,14.6526915562146,0,0,0,0,18.6494547746733,6.4873021295701,4.14755797088455,10.7556839705069,0.118332000730565,0,2.9637093513365,0,1.86123831398592,1.91107787795487,0.111855431797792,0,0,1.29485767437579,5.33846595652485,4.6392577253528,1.45713297917742,0,0,0,0,0,0,8.25763491755008,5.68254857310289,0,1.47088993052343,0,53.788519989495,146.443875361253,8.8757702792514,0,136.088713234828,84.0530859175446,0,1.96409332466223,12.3513205100492,1.20362050033752,2.19100916473955,7.79839781787719,64.0727936686987,0,9.04286819539166,2.18175345170189,6.34832208618481,0,0.924351257262837,0.432626562123789,0,0,0,0.407955318967927,0,0.0918948995348449,0,11.3668047327359,1.87574891109325,50.5793358069855,53.0611268771522,10.0219971493461,2.14257988317366,12.7886041475292,22.2227477179171,0,5.02812550397503,1.41482032270754,4.35433495793923,1.71116650542641,26.8061170998058,38.1562132689038,3.65926392200615,3.90735689332678,1.28072815053259,0,0,11.7320471201727,8.43465964861779,1.62758471326295,18.6411896771944,17.1082724552372,0.641136984606466 | |||
|short_description=p1@FYB | |||
}} |
Revision as of 05:09, 22 January 2014
Short description: | p1@FYB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FYB_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000504542, ENST00000505428, ENST00000506557, ENST00000509072, ENST00000542542, NM_001465, NM_199335, uc003jlt.2, uc003jlu.2_5end |
EntrezGene: | FYB |
HGNC: | 4036 |
UniProt: | E9PBV9D6RAE8D6RC38F5H8I8B4DLN2Q9NZI9O15117Q05DE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.61e-42 | 72 |
macrophage dendritic cell progenitor | 6.71e-41 | 61 |
monopoietic cell | 8.49e-41 | 59 |
monocyte | 8.49e-41 | 59 |
monoblast | 8.49e-41 | 59 |
promonocyte | 8.49e-41 | 59 |
defensive cell | 1.69e-37 | 48 |
phagocyte | 1.69e-37 | 48 |
granulocyte monocyte progenitor cell | 8.69e-36 | 67 |
myeloid cell | 1.10e-34 | 108 |
common myeloid progenitor | 1.10e-34 | 108 |
myeloid lineage restricted progenitor cell | 2.02e-33 | 66 |
classical monocyte | 4.55e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.55e-33 | 42 |
hematopoietic stem cell | 1.58e-24 | 168 |
leukocyte | 3.89e-24 | 136 |
hematopoietic oligopotent progenitor cell | 1.31e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-22 | 161 |
nongranular leukocyte | 2.23e-22 | 115 |
hematopoietic cell | 3.09e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 1.58e-18 | 120 |
intermediate monocyte | 5.38e-08 | 9 |
CD14-positive, CD16-positive monocyte | 5.38e-08 | 9 |
granulocyte | 8.47e-08 | 8 |