FFCP PHASE1:Hg19::chr6:148593425..148593498,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19182 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TGN6 | |||
|association_with_transcript=0bp_to_ENST00000367469_5end | |||
|description=CAGE_peak_2_at_SASH1_5end | |||
|id=chr6:148593425..148593498,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.32e-49!180;CL:0000057!5.79e-35!75;CL:0000680!3.16e-28!57;CL:0000056!3.16e-28!57;CL:0000355!3.16e-28!57;CL:0000187!3.55e-28!54;CL:0000183!1.32e-27!59;CL:0000192!6.21e-23!42;CL:0000514!6.21e-23!42;CL:0000393!9.73e-23!60;CL:0000211!9.73e-23!60;CL:0000359!7.15e-20!32;CL:0002620!4.63e-17!23;CL:0000222!2.00e-15!119;CL:0000048!2.16e-13!430;CL:0000723!2.53e-12!436;CL:0000034!3.42e-11!444;CL:0002494!1.26e-09!16;CL:0002539!5.52e-08!10;CL:0002334!1.27e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.42e-23;32!CL:0002620;9.79e-21;23!CL:0000192;3.64e-20;43!CL:0000187;5.26e-19;55!CL:0000057;6.98e-18;73!CL:0000393;4.95e-15;61!CL:0000211;4.95e-15;61!CL:0002494;1.42e-11;16!CL:0002539;1.62e-09;10!CL:0002334;4.71e-09;12!CL:0002320;6.74e-09;188!CL:0000723;1.41e-08;61!CL:0000134;2.63e-08;55!CL:0000048;3.39e-08;58!CL:0002570;1.31e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.22e-44,76;CL:0000187,5.99e-35,55;CL:0000680,4.01e-33,58;CL:0000056,4.01e-33,58;CL:0000355,4.01e-33,58;CL:0000393,2.42e-29,61;CL:0000211,2.42e-29,61;CL:0000192,2.03e-28,43;CL:0000514,2.03e-28,43;CL:0000048,7.70e-27,427;CL:0000723,1.29e-25,433;CL:0000359,2.90e-24,32;CL:0000034,4.77e-24,441;CL:0002620,8.96e-21,23;CL:0000222,1.22e-17,121;CL:0002494,1.48e-11,16;CL:0002539,1.59e-09,10;CL:0002334,4.47e-09,12;CL:0000134,3.01e-08,354;CL:0002320,9.37e-08,361;CL:0002570,1.25e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000514;3.64e-20;43!CL:0000355;2.39e-17;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.89e-34!83;UBERON:0002329!7.89e-34!83;UBERON:0003077!7.89e-34!83;UBERON:0003059!7.89e-34!83;UBERON:0007282!7.89e-34!83;UBERON:0009618!7.89e-34!83;UBERON:0007285!7.89e-34!83;UBERON:0004290!5.17e-33!70;UBERON:0001134!6.42e-28!61;UBERON:0002036!6.42e-28!61;UBERON:0003082!6.42e-28!61;UBERON:0002385!6.95e-28!63;UBERON:0001015!6.95e-28!63;UBERON:0000383!6.95e-28!63;UBERON:0004872!4.99e-27!84;UBERON:0000486!3.55e-26!82;UBERON:0001981!1.35e-23!60;UBERON:0007500!1.35e-23!60;UBERON:0004537!1.35e-23!60;UBERON:0006965!1.35e-23!60;UBERON:0002049!1.87e-23!79;UBERON:0007798!1.87e-23!79;UBERON:0001637!3.13e-23!42;UBERON:0003509!3.13e-23!42;UBERON:0004572!3.13e-23!42;UBERON:0004535!4.79e-21!110;UBERON:0001009!6.99e-21!113;UBERON:0000055!8.96e-21!69;UBERON:0004573!1.30e-18!33;UBERON:0004571!1.30e-18!33;UBERON:0000475!4.48e-18!365;UBERON:0005256!6.90e-18!143;UBERON:0003914!5.97e-16!118;UBERON:0000490!4.58e-15!138;UBERON:0002199!1.03e-14!45;UBERON:0002416!1.03e-14!45;UBERON:0000119!1.21e-14!312;UBERON:0003102!2.28e-14!95;UBERON:0000483!1.17e-13!309;UBERON:0002097!2.08e-12!40;UBERON:0000947!5.95e-12!21;UBERON:0010191!5.95e-12!21;UBERON:0000948!1.02e-10!24;UBERON:0005498!1.02e-10!24;UBERON:0004140!1.02e-10!24;UBERON:0009881!1.02e-10!24;UBERON:0004141!1.02e-10!24;UBERON:0003084!1.02e-10!24;UBERON:0007005!1.02e-10!24;UBERON:0004139!1.02e-10!24;UBERON:0004291!1.02e-10!24;UBERON:0000477!1.33e-10!286;UBERON:0007100!4.25e-10!27;UBERON:0002100!6.55e-10!216;UBERON:0004111!8.64e-10!241;UBERON:0000025!1.45e-09!194;UBERON:0000468!1.77e-09!659;UBERON:0000481!4.17e-09!347;UBERON:0001135!6.10e-09!15;UBERON:0001013!4.02e-08!14;UBERON:0004237!5.52e-08!10;UBERON:0004695!5.52e-08!10;UBERON:0002111!5.52e-08!10;UBERON:0004178!5.52e-08!10;UBERON:0000467!7.94e-08!625;UBERON:0000480!1.07e-07!626;UBERON:0003104!4.49e-07!238;UBERON:0009142!4.49e-07!238;UBERON:0000479!5.72e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.13e-19;33!UBERON:0004571;1.13e-19;33!UBERON:0001637;1.80e-19;42!UBERON:0003509;1.80e-19;42!UBERON:0004572;1.80e-19;42!UBERON:0000947;1.66e-13;21!UBERON:0010191;1.66e-13;21!UBERON:0007500;8.25e-13;56!UBERON:0001981;8.25e-13;56!UBERON:0004537;8.25e-13;56!UBERON:0002385;1.81e-12;31!UBERON:0001015;1.81e-12;31!UBERON:0000383;1.81e-12;31!UBERON:0002199;2.96e-12;46!UBERON:0002416;2.96e-12;46!UBERON:0002097;4.77e-12;41!UBERON:0003102;2.65e-11;50!UBERON:0000948;7.30e-11;22!UBERON:0001135;6.08e-10;15!UBERON:0001013;1.15e-09;14!UBERON:0007100;1.34e-09;25!UBERON:0004237;1.62e-09;10!UBERON:0004695;1.62e-09;10!UBERON:0002111;1.62e-09;10!UBERON:0004178;1.62e-09;10!UBERON:0002384;3.93e-09;198!UBERON:0000055;1.02e-08;65!UBERON:0002049;2.22e-08;75!UBERON:0007798;2.22e-08;75!UBERON:0002067;1.94e-07;9!UBERON:0003914;6.92e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.14e-38,71;UBERON:0003059,1.14e-38,71;UBERON:0007282,1.14e-38,71;UBERON:0004290,1.14e-38,71;UBERON:0009618,1.14e-38,71;UBERON:0007524,2.46e-38,73;UBERON:0003077,9.32e-38,72;UBERON:0007285,9.32e-38,72;UBERON:0007503,1.14e-34,78;UBERON:0001134,2.15e-32,62;UBERON:0002036,2.15e-32,62;UBERON:0003082,2.15e-32,62;UBERON:0002385,1.03e-31,64;UBERON:0001015,1.03e-31,64;UBERON:0000383,1.03e-31,64;UBERON:0000486,1.41e-31,83;UBERON:0004872,1.16e-27,83;UBERON:0001637,1.57e-27,42;UBERON:0003509,1.57e-27,42;UBERON:0004572,1.57e-27,42;UBERON:0007500,8.40e-23,59;UBERON:0001981,8.40e-23,59;UBERON:0004537,8.40e-23,59;UBERON:0006965,8.40e-23,59;UBERON:0004535,1.40e-22,109;UBERON:0002049,1.61e-22,78;UBERON:0007798,1.61e-22,78;UBERON:0001009,5.59e-22,112;UBERON:0004573,8.38e-22,33;UBERON:0004571,8.38e-22,33;UBERON:0005256,8.71e-22,122;UBERON:0000490,1.98e-20,148;UBERON:0000055,1.43e-19,68;UBERON:0002199,7.27e-19,46;UBERON:0002416,7.27e-19,46;UBERON:0003914,2.59e-17,117;UBERON:0002097,5.62e-16,41;UBERON:0003102,5.86e-16,99;UBERON:0003104,1.41e-14,160;UBERON:0009142,1.41e-14,160;UBERON:0000947,1.44e-13,21;UBERON:0010191,1.44e-13,21;UBERON:0000926,2.49e-13,315;UBERON:0004120,2.49e-13,315;UBERON:0006603,2.49e-13,315;UBERON:0000948,3.35e-12,24;UBERON:0005498,3.35e-12,24;UBERON:0004140,3.35e-12,24;UBERON:0009881,3.35e-12,24;UBERON:0004141,3.35e-12,24;UBERON:0003084,3.35e-12,24;UBERON:0007005,3.35e-12,24;UBERON:0004139,3.35e-12,24;UBERON:0004291,3.35e-12,24;UBERON:0007100,6.61e-11,27;UBERON:0002100,1.54e-10,199;UBERON:0000119,4.15e-10,309;UBERON:0001135,5.58e-10,15;UBERON:0001013,1.08e-09,14;UBERON:0004237,1.59e-09,10;UBERON:0004695,1.59e-09,10;UBERON:0002111,1.59e-09,10;UBERON:0004178,1.59e-09,10;UBERON:0000483,3.31e-09,306;UBERON:0002384,7.17e-08,371;UBERON:0002204,1.53e-07,167;UBERON:0002067,1.99e-07,9;UBERON:0004016,1.99e-07,9;UBERON:0010083,1.99e-07,9;UBERON:0000479,2.96e-07,773 | |||
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| |||
|short_description=p2@SASH1 | |||
}} |
Revision as of 14:29, 22 January 2014
Short description: | p2@SASH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SASH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000367469_5end |
EntrezGene: | SASH1 |
HGNC: | 19182 |
UniProt: | Q5TGN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.22e-44 | 76 |
muscle cell | 5.99e-35 | 55 |
muscle precursor cell | 4.01e-33 | 58 |
myoblast | 4.01e-33 | 58 |
multi-potent skeletal muscle stem cell | 4.01e-33 | 58 |
electrically responsive cell | 2.42e-29 | 61 |
electrically active cell | 2.42e-29 | 61 |
smooth muscle cell | 2.03e-28 | 43 |
smooth muscle myoblast | 2.03e-28 | 43 |
multi fate stem cell | 7.70e-27 | 427 |
somatic stem cell | 1.29e-25 | 433 |
vascular associated smooth muscle cell | 2.90e-24 | 32 |
stem cell | 4.77e-24 | 441 |
skin fibroblast | 8.96e-21 | 23 |
mesodermal cell | 1.22e-17 | 121 |
cardiocyte | 1.48e-11 | 16 |
aortic smooth muscle cell | 1.59e-09 | 10 |
preadipocyte | 4.47e-09 | 12 |
mesenchymal cell | 3.01e-08 | 354 |
connective tissue cell | 9.37e-08 | 361 |
mesenchymal stem cell of adipose | 1.25e-07 | 8 |